Gene annotation
Transcriptome id Sobic.002G161900.1
Synonym Sb02g020710
Functional annotation NBS-LRR disease resistance protein, putative, expressed
UniProt C5X8Z4
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF586
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14460 : LRR and NB-ARC domains-containing disease resistance protein
RAP-DB (Rice) LOC_Os06g49390.1 : NBS-LRR disease resistance protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU5Hr1G049250.1 , HORVU7Hr1G031420.1 , HORVU1Hr1G021390.18 , HORVU1Hr1G021390.10 , HORVU1Hr1G021390.11 , HORVU1Hr1G021390.12 , HORVU1Hr1G021390.14 , HORVU1Hr1G021390.17 , HORVU1Hr1G021390.8 , HORVU1Hr1G021390.9 , HORVU1Hr1G021390.2 , HORVU1Hr1G021390.3 , HORVU1Hr1G021390.6 , HORVU1Hr1G021390.7 , HORVU1Hr1G021390.5 , HORVU2Hr1G000620.1 , HORVU1Hr1G021390.24 , HORVU1Hr1G021390.21 , HORVU1Hr1G021390.20 , HORVU1Hr1G021390.23 , HORVU1Hr1G021390.22 , HORVU1Hr1G020240.9 , HORVU1Hr1G020240.8 , HORVU1Hr1G020240.3 , HORVU1Hr1G020240.2 , HORVU1Hr1G020240.1 , HORVU1Hr1G020240.7 , HORVU1Hr1G020240.6 , HORVU1Hr1G020240.5 , HORVU1Hr1G020240.4
Wheat TraesCSU02G011300 , TraesCS2A02G003600 , TraesCS2B02G018200 , TraesCS2A02G004900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G019600 rp3 protein, putative, expressed -
2 Sobic.010G112000 expressed protein K17906: autophagy-related protein 2
3 Sobic.002G173000 disease resistance protein RGA2, putative, expressed -
4 Sobic.005G032800 splicing factor, putative, expressed K13109: IK, RED, IK cytokine
5 Sobic.001G474600 calmodulin-binding transcription activator, putative, expressed -
6 Sobic.009G221000 NBS-LRR disease resistance protein, putative, expressed -
7 Sobic.008G016300 expressed protein -
8 Sobic.001G280900 expressed protein -
9 Sobic.007G020500 expressed protein K15198: BDP1, transcription factor TFIIIB component B''
10 Sobic.003G280800 RNA recognition motif family protein, expressed K13094: RNA-binding protein 5/10
11 Sobic.001G178700 NBS-LRR disease resistance protein, putative, expressed -
12 Sobic.002G169633 - -
13 Sobic.010G239600 RNA polymerase I specific transcription initiation factor RRN3 family protein, putative, expressed K15216: RRN3, RNA polymerase I-specific transcription initiation factor RRN3
14 Sobic.004G263600 - K03655: ATP-dependent DNA helicase RecG
15 Sobic.004G359800 inositol-1-monophosphatase, putative, expressed -
16 Sobic.007G099000 - -
17 Sobic.002G134200 WD domain, G-beta repeat domain containing protein, expressed K11293: HIRA, protein HIRA/HIR1
18 Sobic.004G034900 histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
19 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1
20 Sobic.001G072500 expressed protein K12879: THO complex subunit 2


Gene co-expression network
sample Sobic002G161900 Sobic002G161900 Sobic005G019600 Sobic005G019600 Sobic002G161900--Sobic005G019600 Sobic010G112000 Sobic010G112000 Sobic002G161900--Sobic010G112000 Sobic002G173000 Sobic002G173000 Sobic002G161900--Sobic002G173000 Sobic005G032800 Sobic005G032800 Sobic002G161900--Sobic005G032800 Sobic001G474600 Sobic001G474600 Sobic002G161900--Sobic001G474600 Sobic009G221000 Sobic009G221000 Sobic002G161900--Sobic009G221000 Sobic008G016300 Sobic008G016300 Sobic002G161900--Sobic008G016300 Sobic001G280900 Sobic001G280900 Sobic002G161900--Sobic001G280900 Sobic007G020500 Sobic007G020500 Sobic002G161900--Sobic007G020500 Sobic005G019600--Sobic009G221000 Sobic005G019600--Sobic002G161900 Sobic005G019600--Sobic002G173000 Sobic005G019600--Sobic005G032800 Sobic006G128900 Sobic006G128900 Sobic005G019600--Sobic006G128900 Sobic005G019600--Sobic001G474600 Sobic003G113200 Sobic003G113200 Sobic005G019600--Sobic003G113200 Sobic001G028900 Sobic001G028900 Sobic005G019600--Sobic001G028900 Sobic008G024600 Sobic008G024600 Sobic005G019600--Sobic008G024600 Sobic001G498600 Sobic001G498600 Sobic010G112000--Sobic001G498600 Sobic004G034900 Sobic004G034900 Sobic010G112000--Sobic004G034900 Sobic002G008900 Sobic002G008900 Sobic010G112000--Sobic002G008900 Sobic001G540400 Sobic001G540400 Sobic010G112000--Sobic001G540400 Sobic001G289600 Sobic001G289600 Sobic010G112000--Sobic001G289600 Sobic001G146800 Sobic001G146800 Sobic010G112000--Sobic001G146800 Sobic005G008800 Sobic005G008800 Sobic010G112000--Sobic005G008800 Sobic010G112000--Sobic001G280900 Sobic001G058700 Sobic001G058700 Sobic010G112000--Sobic001G058700 Sobic006G182900 Sobic006G182900 Sobic002G173000--Sobic006G182900 Sobic001G214300 Sobic001G214300 Sobic002G173000--Sobic001G214300 Sobic002G173000--Sobic005G032800 Sobic006G021250 Sobic006G021250 Sobic002G173000--Sobic006G021250 Sobic010G248700 Sobic010G248700 Sobic002G173000--Sobic010G248700 Sobic008G027000 Sobic008G027000 Sobic002G173000--Sobic008G027000 Sobic001G287201 Sobic001G287201 Sobic002G173000--Sobic001G287201 Sobic001G318432 Sobic001G318432 Sobic002G173000--Sobic001G318432 Sobic002G173000--Sobic001G474600 Sobic003G280800 Sobic003G280800 Sobic005G032800--Sobic003G280800 Sobic005G032800--Sobic001G474600 Sobic005G032800--Sobic002G173000 Sobic005G032800--Sobic006G021250 Sobic002G134200 Sobic002G134200 Sobic005G032800--Sobic002G134200 Sobic002G169633 Sobic002G169633 Sobic005G032800--Sobic002G169633 Sobic005G032800--Sobic001G498600 Sobic005G032800--Sobic010G112000 Sobic001G292200 Sobic001G292200 Sobic005G032800--Sobic001G292200 Sobic001G474600--Sobic003G280800 Sobic009G166300 Sobic009G166300 Sobic001G474600--Sobic009G166300 Sobic001G125200 Sobic001G125200 Sobic001G474600--Sobic001G125200 Sobic003G372700 Sobic003G372700 Sobic001G474600--Sobic003G372700 Sobic007G217000 Sobic007G217000 Sobic001G474600--Sobic007G217000 Sobic007G096000 Sobic007G096000 Sobic001G474600--Sobic007G096000 Sobic007G207000 Sobic007G207000 Sobic001G474600--Sobic007G207000 Sobic009G191000 Sobic009G191000 Sobic001G474600--Sobic009G191000 Sobic001G241200 Sobic001G241200 Sobic001G474600--Sobic001G241200 Sobic009G221000--Sobic005G019600 Sobic009G221000--Sobic005G032800 Sobic009G221000--Sobic002G173000 Sobic008G101000 Sobic008G101000 Sobic009G221000--Sobic008G101000 Sobic005G209100 Sobic005G209100 Sobic009G221000--Sobic005G209100 Sobic009G221000--Sobic002G161900 Sobic009G221000--Sobic008G027000 Sobic009G221000--Sobic003G113200 Sobic008G185300 Sobic008G185300 Sobic009G221000--Sobic008G185300 Sobic002G316600 Sobic002G316600 Sobic008G016300--Sobic002G316600 Sobic002G391600 Sobic002G391600 Sobic008G016300--Sobic002G391600 Sobic010G010700 Sobic010G010700 Sobic008G016300--Sobic010G010700 Sobic009G256300 Sobic009G256300 Sobic008G016300--Sobic009G256300 Sobic006G055200 Sobic006G055200 Sobic008G016300--Sobic006G055200 Sobic009G109200 Sobic009G109200 Sobic008G016300--Sobic009G109200 Sobic010G206900 Sobic010G206900 Sobic008G016300--Sobic010G206900 Sobic008G016300--Sobic004G034900 Sobic007G103100 Sobic007G103100 Sobic008G016300--Sobic007G103100 Sobic001G280900--Sobic001G540400 Sobic005G112300 Sobic005G112300 Sobic001G280900--Sobic005G112300 Sobic002G397500 Sobic002G397500 Sobic001G280900--Sobic002G397500 Sobic003G408600 Sobic003G408600 Sobic001G280900--Sobic003G408600 Sobic001G280900--Sobic009G109200 Sobic001G280900--Sobic005G008800 Sobic007G062800 Sobic007G062800 Sobic001G280900--Sobic007G062800 Sobic001G280900--Sobic001G058700 Sobic001G050600 Sobic001G050600 Sobic001G280900--Sobic001G050600 Sobic007G020500--Sobic002G169633 Sobic007G202900 Sobic007G202900 Sobic007G020500--Sobic007G202900 Sobic001G072500 Sobic001G072500 Sobic007G020500--Sobic001G072500 Sobic007G020500--Sobic002G173000 Sobic004G314000 Sobic004G314000 Sobic007G020500--Sobic004G314000 Sobic007G020500--Sobic002G161900 Sobic007G020500--Sobic003G280800 Sobic004G359800 Sobic004G359800 Sobic007G020500--Sobic004G359800 Sobic010G139000 Sobic010G139000 Sobic007G020500--Sobic010G139000
Octagon: transcription factors


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