Gene annotation
Transcriptome id Sobic.001G196500.2
Synonym Sb01g017290
Functional annotation plus-3 domain containing protein, putative, expressed
UniProt A0A1Z5S6G2
Pfam PF02213 PF02201 PF03126
Panther DB PTHR22884 PTHR22884:SF326
NCBI CDD KOG1946; RNA polymerase I transcription factor UAF
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT2G16485 : nucleic acid binding;zinc ion binding;DNA binding
RAP-DB (Rice) LOC_Os10g36810.1 : plus-3 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a006337 , Zm00025a000194 , Zm00025a017436
Brachypodium PNT67689 , KQJ97407
Barley HORVU4Hr1G089290.10 , HORVU4Hr1G089290.11 , HORVU4Hr1G089290.9 , HORVU4Hr1G089290.5 , HORVU4Hr1G089290.7 , HORVU4Hr1G089290.1
Wheat TraesCS1D02G176600 , TraesCS1D02G176600 , TraesCS1B02G202200 , TraesCS5A02G557400 , TraesCS1A02G178100 , TraesCS4B02G395800 , TraesCS4B02G395800 , TraesCSU02G031300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G229500 ZOS12-01 - C2H2 zinc finger protein, expressed -
2 Sobic.002G299700 ATGRIP/GRIP, putative, expressed -
3 Sobic.010G275500 EF hand family protein, putative, expressed -
4 Sobic.008G132600 expressed protein -
5 Sobic.003G101400 transcriptional repressor, putative, expressed K11644: paired amphipathic helix protein Sin3a
6 Sobic.001G540400 expressed protein -
7 Sobic.003G408600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
8 Sobic.002G397500 SAC3/GANP family protein, expressed -
9 Sobic.001G457900 expressed protein -
10 Sobic.007G062800 SET domain containing protein, expressed -
11 Sobic.007G207000 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL15 - SBP-box gene family member, expressed -
12 Sobic.001G050200 expressed protein -
13 Sobic.010G118950 - -
14 Sobic.001G117200 AGC_AGC_other_GWLd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
15 Sobic.001G281100 START domain containing protein, expressed -
16 Sobic.010G116600 FHA domain containing protein, putative, expressed -
17 Sobic.008G099800 expressed protein -
18 Sobic.010G148932 - -
19 Sobic.001G025000 FACT complex subunit SPT16, putative, expressed -
20 Sobic.002G042600 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7


Gene co-expression network
sample Sobic001G196500 Sobic001G196500 Sobic003G229500 Sobic003G229500 Sobic001G196500--Sobic003G229500 Sobic002G299700 Sobic002G299700 Sobic001G196500--Sobic002G299700 Sobic010G275500 Sobic010G275500 Sobic001G196500--Sobic010G275500 Sobic008G132600 Sobic008G132600 Sobic001G196500--Sobic008G132600 Sobic003G101400 Sobic003G101400 Sobic001G196500--Sobic003G101400 Sobic001G540400 Sobic001G540400 Sobic001G196500--Sobic001G540400 Sobic003G408600 Sobic003G408600 Sobic001G196500--Sobic003G408600 Sobic002G397500 Sobic002G397500 Sobic001G196500--Sobic002G397500 Sobic001G457900 Sobic001G457900 Sobic001G196500--Sobic001G457900 Sobic003G229500--Sobic008G132600 Sobic007G062800 Sobic007G062800 Sobic003G229500--Sobic007G062800 Sobic003G229500--Sobic003G101400 Sobic003G229500--Sobic001G196500 Sobic002G042600 Sobic002G042600 Sobic003G229500--Sobic002G042600 Sobic001G363500 Sobic001G363500 Sobic003G229500--Sobic001G363500 Sobic001G347500 Sobic001G347500 Sobic003G229500--Sobic001G347500 Sobic003G072200 Sobic003G072200 Sobic003G229500--Sobic003G072200 Sobic003G229500--Sobic001G540400 Sobic010G116600 Sobic010G116600 Sobic002G299700--Sobic010G116600 Sobic002G299700--Sobic001G363500 Sobic005G112300 Sobic005G112300 Sobic002G299700--Sobic005G112300 Sobic002G299700--Sobic002G397500 Sobic004G048800 Sobic004G048800 Sobic002G299700--Sobic004G048800 Sobic004G242400 Sobic004G242400 Sobic002G299700--Sobic004G242400 Sobic007G105100 Sobic007G105100 Sobic002G299700--Sobic007G105100 Sobic002G299700--Sobic003G408600 Sobic002G299700--Sobic007G062800 Sobic010G053800 Sobic010G053800 Sobic010G275500--Sobic010G053800 Sobic004G072100 Sobic004G072100 Sobic010G275500--Sobic004G072100 Sobic006G012500 Sobic006G012500 Sobic010G275500--Sobic006G012500 Sobic001G155000 Sobic001G155000 Sobic010G275500--Sobic001G155000 Sobic010G275500--Sobic010G116600 Sobic010G069100 Sobic010G069100 Sobic010G275500--Sobic010G069100 Sobic009G119000 Sobic009G119000 Sobic010G275500--Sobic009G119000 Sobic007G183900 Sobic007G183900 Sobic010G275500--Sobic007G183900 Sobic010G275500--Sobic002G397500 Sobic008G132600--Sobic003G101400 Sobic003G422500 Sobic003G422500 Sobic008G132600--Sobic003G422500 Sobic002G411600 Sobic002G411600 Sobic008G132600--Sobic002G411600 Sobic008G132600--Sobic003G229500 Sobic009G191000 Sobic009G191000 Sobic008G132600--Sobic009G191000 Sobic009G027300 Sobic009G027300 Sobic008G132600--Sobic009G027300 Sobic008G132600--Sobic007G062800 Sobic002G008900 Sobic002G008900 Sobic008G132600--Sobic002G008900 Sobic010G247800 Sobic010G247800 Sobic008G132600--Sobic010G247800 Sobic003G101400--Sobic008G132600 Sobic003G101400--Sobic003G422500 Sobic003G101400--Sobic002G411600 Sobic003G101400--Sobic007G062800 Sobic003G101400--Sobic001G540400 Sobic003G101400--Sobic009G191000 Sobic003G101400--Sobic002G008900 Sobic001G290100 Sobic001G290100 Sobic003G101400--Sobic001G290100 Sobic003G101400--Sobic003G229500 Sobic001G289600 Sobic001G289600 Sobic001G540400--Sobic001G289600 Sobic001G540400--Sobic003G408600 Sobic001G540400--Sobic007G062800 Sobic005G008800 Sobic005G008800 Sobic001G540400--Sobic005G008800 Sobic004G034900 Sobic004G034900 Sobic001G540400--Sobic004G034900 Sobic001G540400--Sobic005G112300 Sobic001G540400--Sobic003G422500 Sobic001G540400--Sobic002G397500 Sobic010G112100 Sobic010G112100 Sobic001G540400--Sobic010G112100 Sobic003G408600--Sobic001G540400 Sobic003G408600--Sobic005G008800 Sobic003G408600--Sobic002G397500 Sobic003G408600--Sobic005G112300 Sobic007G163100 Sobic007G163100 Sobic003G408600--Sobic007G163100 Sobic003G408600--Sobic010G112100 Sobic001G058700 Sobic001G058700 Sobic003G408600--Sobic001G058700 Sobic002G071500 Sobic002G071500 Sobic003G408600--Sobic002G071500 Sobic002G045600 Sobic002G045600 Sobic003G408600--Sobic002G045600 Sobic002G397500--Sobic003G408600 Sobic002G397500--Sobic007G062800 Sobic002G397500--Sobic005G112300 Sobic002G397500--Sobic001G540400 Sobic009G109200 Sobic009G109200 Sobic002G397500--Sobic009G109200 Sobic002G397500--Sobic003G072200 Sobic002G397500--Sobic004G242400 Sobic004G276400 Sobic004G276400 Sobic002G397500--Sobic004G276400 Sobic002G397500--Sobic010G112100 Sobic002G133300 Sobic002G133300 Sobic001G457900--Sobic002G133300 Sobic003G196300 Sobic003G196300 Sobic001G457900--Sobic003G196300 Sobic001G117200 Sobic001G117200 Sobic001G457900--Sobic001G117200 Sobic008G092600 Sobic008G092600 Sobic001G457900--Sobic008G092600 Sobic001G273700 Sobic001G273700 Sobic001G457900--Sobic001G273700 Sobic001G457900--Sobic003G072200 Sobic003G428100 Sobic003G428100 Sobic001G457900--Sobic003G428100 Sobic001G457900--Sobic001G196500 Sobic001G457900--Sobic003G229500
Octagon: transcription factors


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