Gene annotation
Transcriptome id Sobic.003G174100.2,Sobic.003G174100.3,Sobic.003G174100.1
Synonym
Functional annotation phosphoesterase family protein, putative, expressed
UniProt A0A1B6Q3W0 , A0A1B6Q3W7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g61130.1 : phosphoesterase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a008875 , Zm00025a015255
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G084500 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family
2 Sobic.010G211500 DNA-directed RNA polymerase 3A, chloroplast precursor, putative, expressed K10908: POLRMT, DNA-directed RNA polymerase, mitochondrial
3 Sobic.010G028000 ribosome-binding factor A, chloroplast precursor, putative, expressed K02834: ribosome-binding factor A
4 Sobic.001G537700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- K13179: DDX18, ATP-dependent RNA helicase DDX18/HAS1
5 Sobic.004G248400 APO, putative, expressed -
6 Sobic.009G234200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@16S rRNA processing protein RimM containing protein, expressed -
7 Sobic.003G179400 NLI interacting factor(NIF) family protein(PubMedID : 26320239)@NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
8 Sobic.007G205600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00434: L-ascorbate peroxidase
9 Sobic.001G450600 uncharacterized protein sll0194, putative, expressed K03118: sec-independent protein translocase protein TatC
10 Sobic.007G227600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed -
11 Sobic.002G114700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.008G063200 expressed protein -
13 Sobic.010G183400 down-regulated TF in developmental senescence(PubMedID : 27586543)@homeobox domain containing protein, expressed -
14 Sobic.010G231100 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
15 Sobic.006G214700 APO, putative, expressed -
16 Sobic.004G333400 COBW domain containing protein, putative, expressed -
17 Sobic.001G388400 expressed protein -
18 Sobic.006G273400 pentatricopeptide repeat protein, putative, expressed -
19 Sobic.002G163700 expressed protein -
20 Sobic.003G334100 zinc finger family protein, putative, expressed -


Gene co-expression network
sample Sobic003G174100 Sobic003G174100 Sobic003G084500 Sobic003G084500 Sobic003G174100--Sobic003G084500 Sobic010G211500 Sobic010G211500 Sobic003G174100--Sobic010G211500 Sobic010G028000 Sobic010G028000 Sobic003G174100--Sobic010G028000 Sobic001G537700 Sobic001G537700 Sobic003G174100--Sobic001G537700 Sobic004G248400 Sobic004G248400 Sobic003G174100--Sobic004G248400 Sobic009G234200 Sobic009G234200 Sobic003G174100--Sobic009G234200 Sobic003G179400 Sobic003G179400 Sobic003G174100--Sobic003G179400 Sobic007G205600 Sobic007G205600 Sobic003G174100--Sobic007G205600 Sobic001G450600 Sobic001G450600 Sobic003G174100--Sobic001G450600 Sobic004G333400 Sobic004G333400 Sobic003G084500--Sobic004G333400 Sobic003G334100 Sobic003G334100 Sobic003G084500--Sobic003G334100 Sobic003G084500--Sobic001G450600 Sobic003G084500--Sobic009G234200 Sobic003G286300 Sobic003G286300 Sobic003G084500--Sobic003G286300 Sobic003G444500 Sobic003G444500 Sobic003G084500--Sobic003G444500 Sobic010G183400 Sobic010G183400 Sobic003G084500--Sobic010G183400 Sobic002G131700 Sobic002G131700 Sobic003G084500--Sobic002G131700 Sobic001G054100 Sobic001G054100 Sobic003G084500--Sobic001G054100 Sobic007G227600 Sobic007G227600 Sobic010G211500--Sobic007G227600 Sobic009G036300 Sobic009G036300 Sobic010G211500--Sobic009G036300 Sobic001G207200 Sobic001G207200 Sobic010G211500--Sobic001G207200 Sobic009G052700 Sobic009G052700 Sobic010G211500--Sobic009G052700 Sobic010G211500--Sobic003G084500 Sobic010G211500--Sobic001G450600 Sobic010G211500--Sobic003G334100 Sobic010G211500--Sobic010G183400 Sobic010G074100 Sobic010G074100 Sobic010G211500--Sobic010G074100 Sobic001G388400 Sobic001G388400 Sobic010G028000--Sobic001G388400 Sobic010G028000--Sobic009G234200 Sobic006G204100 Sobic006G204100 Sobic010G028000--Sobic006G204100 Sobic010G074200 Sobic010G074200 Sobic010G028000--Sobic010G074200 Sobic010G028000--Sobic009G036300 Sobic010G028000--Sobic007G227600 Sobic003G330100 Sobic003G330100 Sobic010G028000--Sobic003G330100 Sobic003G245800 Sobic003G245800 Sobic010G028000--Sobic003G245800 Sobic010G028000--Sobic010G183400 Sobic003G039300 Sobic003G039300 Sobic001G537700--Sobic003G039300 Sobic001G076200 Sobic001G076200 Sobic001G537700--Sobic001G076200 Sobic006G110200 Sobic006G110200 Sobic001G537700--Sobic006G110200 Sobic001G537700--Sobic007G205600 Sobic007G069400 Sobic007G069400 Sobic001G537700--Sobic007G069400 Sobic001G537700--Sobic001G388400 Sobic009G233800 Sobic009G233800 Sobic001G537700--Sobic009G233800 Sobic001G537700--Sobic010G028000 Sobic002G114700 Sobic002G114700 Sobic001G537700--Sobic002G114700 Sobic006G214700 Sobic006G214700 Sobic004G248400--Sobic006G214700 Sobic004G248400--Sobic004G333400 Sobic004G248400--Sobic009G052700 Sobic002G168300 Sobic002G168300 Sobic004G248400--Sobic002G168300 Sobic004G248400--Sobic001G450600 Sobic004G248400--Sobic003G334100 Sobic004G248400--Sobic003G179400 Sobic008G063200 Sobic008G063200 Sobic004G248400--Sobic008G063200 Sobic010G110332 Sobic010G110332 Sobic004G248400--Sobic010G110332 Sobic009G234200--Sobic001G388400 Sobic009G234200--Sobic010G028000 Sobic009G234200--Sobic010G183400 Sobic009G234200--Sobic003G330100 Sobic004G250200 Sobic004G250200 Sobic009G234200--Sobic004G250200 Sobic009G234200--Sobic006G204100 Sobic009G234200--Sobic003G245800 Sobic006G111600 Sobic006G111600 Sobic009G234200--Sobic006G111600 Sobic004G179200 Sobic004G179200 Sobic009G234200--Sobic004G179200 Sobic003G179400--Sobic006G214700 Sobic010G231100 Sobic010G231100 Sobic003G179400--Sobic010G231100 Sobic005G028900 Sobic005G028900 Sobic003G179400--Sobic005G028900 Sobic010G076800 Sobic010G076800 Sobic003G179400--Sobic010G076800 Sobic003G179400--Sobic004G333400 Sobic003G179400--Sobic001G450600 Sobic003G179400--Sobic008G063200 Sobic002G331800 Sobic002G331800 Sobic003G179400--Sobic002G331800 Sobic006G110900 Sobic006G110900 Sobic003G179400--Sobic006G110900 Sobic007G205600--Sobic001G388400 Sobic003G170200 Sobic003G170200 Sobic007G205600--Sobic003G170200 Sobic007G205600--Sobic001G537700 Sobic010G258300 Sobic010G258300 Sobic007G205600--Sobic010G258300 Sobic006G220600 Sobic006G220600 Sobic007G205600--Sobic006G220600 Sobic003G222600 Sobic003G222600 Sobic007G205600--Sobic003G222600 Sobic007G205600--Sobic010G211500 Sobic007G205600--Sobic001G450600 Sobic001G031300 Sobic001G031300 Sobic007G205600--Sobic001G031300 Sobic001G450600--Sobic006G214700 Sobic001G450600--Sobic004G333400 Sobic001G450600--Sobic008G063200 Sobic001G450600--Sobic010G183400 Sobic001G450600--Sobic003G084500 Sobic001G450600--Sobic002G331800 Sobic001G450600--Sobic003G286300 Sobic001G450600--Sobic003G334100 Sobic010G189200 Sobic010G189200 Sobic001G450600--Sobic010G189200
Octagon: transcription factors


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