Gene annotation
| Transcriptome id | Sobic.002G274200.1,Sobic.002G274200.5,Sobic.002G274200.4,Sobic.002G274200.2,Sobic.002G274200.3 |
|---|---|
| Synonym | Sb02g030780 |
| Functional annotation | expressed protein |
| UniProt | A0A1B6QDR2 , A0A1W0W611 , A0A1B6QDR5 |
| Pfam | - |
| Panther DB | PTHR36348 PTHR36348:SF1 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT2G21385 : - |
|---|---|
| RAP-DB (Rice) | LOC_Os09g36130.1 : expressed protein |
| MaizeGDB (Corn) | Zm00025a037993 |
| Brachypodium | - |
| Barley | HORVU1Hr1G045280.10 , HORVU1Hr1G045280.11 , HORVU1Hr1G045280.12 , HORVU1Hr1G045280.13 , HORVU1Hr1G045280.14 , HORVU1Hr1G045280.15 , HORVU1Hr1G045280.2 , HORVU1Hr1G045280.3 , HORVU1Hr1G045280.1 , HORVU1Hr1G045280.6 , HORVU1Hr1G045280.7 , HORVU1Hr1G045280.4 , HORVU1Hr1G045280.5 , HORVU1Hr1G045280.8 , HORVU1Hr1G045280.9 |
| Wheat | TraesCS1A02G168400 , TraesCS1A02G168400 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
 |
Find similar expressed genes
 |
| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.005G110400 | pentatricopeptide repeat protein PPR986-12, putative, expressed | - |
| 2 | Sobic.002G272100 | expressed protein | - |
| 3 | Sobic.006G021600 | uncharacterized membrane protein, putative, expressed | - |
| 4 | Sobic.008G073100 | uncharacterized protein ycf45, putative, expressed | - |
| 5 | Sobic.002G405100 | elongation factor TS family protein, expressed | K02357: tsf, elongation factor Ts |
| 6 | Sobic.003G077400 | peptidase M50 family protein, putative, expressed | - |
| 7 | Sobic.001G368500 | ribosomal protein L6, putative, expressed | K02933: RP-L6, MRPL6, large subunit ribosomal protein L6 |
| 8 | Sobic.005G143500 | aspartyl/glutamyl-tRNA amidotransferase subunit B, putative, expressed | K02434: gatB, aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B |
| 9 | Sobic.002G401800 | bifunctional thioredoxin reductase/thioredoxin, putative, expressed | K00384: trxB, thioredoxin reductase (NADPH) |
| 10 | Sobic.008G050400 | 5-formyltetrahydrofolate cyclo-ligase, putative, expressed | - |
| 11 | Sobic.003G432500 | Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@signal recognition particle receptor, putative, expressed | K03110: fused signal recognition particle receptor |
| 12 | Sobic.010G005500 | ferredoxin--NADP reductase, chloroplast precursor, putative, expressed | K02641: ferredoxin--NADP+ reductase |
| 13 | Sobic.007G052400 | rubredoxin family protein, putative, expressed | - |
| 14 | Sobic.002G406700 | tyrosine-specific transport protein, putative, expressed | K03834: tyrosine-specific transport protein |
| 15 | Sobic.004G012900 | expressed protein | - |
| 16 | Sobic.001G495200 | Glutathione reductases(PubMedID : 23783412)@glutathione reductase, putative, expressed | K00383: GSR, glutathione reductase (NADPH) |
| 17 | Sobic.010G035400 | expressed protein | - |
| 18 | Sobic.005G100300 | OsClp12 - Putative Clp protease homologue, expressed | - |
| 19 | Sobic.001G025400 | fumarylacetoacetase, putative, expressed | K01557: acylpyruvate hydrolase |
| 20 | Sobic.001G469933 | - | K02946: RP-S10, MRPS10, small subunit ribosomal protein S10 |
Gene co-expression network
Octagon: transcription factors
© 2015- RIKEN, All rights reserved.
