Gene annotation
Transcriptome id Sobic.001G494500.2
Synonym Sb01g046230
Functional annotation kinase, pfkB family, putative, expressed
UniProt A0A1Z5SB73
Pfam PF00294
Panther DB PTHR10584 PTHR10584:SF184
NCBI CDD KOG2855; Ribokinase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G06730 : pfkB-like carbohydrate kinase family protein
RAP-DB (Rice) LOC_Os03g06880.1 : kinase, pfkB family, putative, expressed
MaizeGDB (Corn) Zm00025a000797
Brachypodium KQK23488
Barley HORVU4Hr1G074090.4 , HORVU4Hr1G074090.2 , HORVU4Hr1G074090.3
Wheat TraesCS4D02G278200 , TraesCS4B02G279800 , TraesCS4A02G023800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G514100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
2 Sobic.003G128400 OsClp1 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
3 Sobic.002G156100 phosphoglycerate mutase, putative, expressed -
4 Sobic.008G067100 phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase, putative, expressed K14153: hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase
5 Sobic.001G375000 OsClp5 - Putative Clp protease homologue, expressed -
6 Sobic.001G202000 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
7 Sobic.007G095500 expressed protein -
8 Sobic.002G043600 prolyl-tRNA synthetase, putative, expressed K01881: PARS, prolyl-tRNA synthetase
9 Sobic.004G225600 - -
10 Sobic.004G208600 glycine-rich protein, putative, expressed -
11 Sobic.005G002900 OsGrx_S16 - glutaredoxin subgroup II, expressed -
12 Sobic.006G055800 mttA/Hcf106 family protein, putative, expressed -
13 Sobic.003G234900 radical SAM enzyme, putative, expressed K06941: 23S rRNA (adenine2503-C2)-methyltransferase
14 Sobic.001G102500 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative, expressed K03527: ispH, 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
15 Sobic.001G382800 ABC transporter, ATP-binding protein, putative, expressed K09013: Fe-S cluster assembly ATP-binding protein
16 Sobic.002G343400 tic20, putative, expressed -
17 Sobic.002G056800 YGGT family protein, putative, expressed -
18 Sobic.003G141100 O-sialoglycoprotein endopeptidase, putative, expressed K01409: KAE1, tsaD, N6-L-threonylcarbamoyladenine synthase
19 Sobic.001G043800 stage II sporulation protein E, putative, expressed -
20 Sobic.006G256600 expressed protein -


Gene co-expression network
sample Sobic001G494500 Sobic001G494500 Sobic001G514100 Sobic001G514100 Sobic001G494500--Sobic001G514100 Sobic003G128400 Sobic003G128400 Sobic001G494500--Sobic003G128400 Sobic002G156100 Sobic002G156100 Sobic001G494500--Sobic002G156100 Sobic008G067100 Sobic008G067100 Sobic001G494500--Sobic008G067100 Sobic001G375000 Sobic001G375000 Sobic001G494500--Sobic001G375000 Sobic001G202000 Sobic001G202000 Sobic001G494500--Sobic001G202000 Sobic007G095500 Sobic007G095500 Sobic001G494500--Sobic007G095500 Sobic002G043600 Sobic002G043600 Sobic001G494500--Sobic002G043600 Sobic004G225600 Sobic004G225600 Sobic001G494500--Sobic004G225600 Sobic003G162800 Sobic003G162800 Sobic001G514100--Sobic003G162800 Sobic001G281500 Sobic001G281500 Sobic001G514100--Sobic001G281500 Sobic003G327200 Sobic003G327200 Sobic001G514100--Sobic003G327200 Sobic005G197300 Sobic005G197300 Sobic001G514100--Sobic005G197300 Sobic001G514100--Sobic001G375000 Sobic001G514100--Sobic003G128400 Sobic001G514100--Sobic001G494500 Sobic002G297400 Sobic002G297400 Sobic001G514100--Sobic002G297400 Sobic001G382800 Sobic001G382800 Sobic001G514100--Sobic001G382800 Sobic003G128400--Sobic001G375000 Sobic007G101300 Sobic007G101300 Sobic003G128400--Sobic007G101300 Sobic003G045300 Sobic003G045300 Sobic003G128400--Sobic003G045300 Sobic005G184300 Sobic005G184300 Sobic003G128400--Sobic005G184300 Sobic004G003900 Sobic004G003900 Sobic003G128400--Sobic004G003900 Sobic006G055800 Sobic006G055800 Sobic003G128400--Sobic006G055800 Sobic003G128400--Sobic002G156100 Sobic003G128400--Sobic002G297400 Sobic010G255100 Sobic010G255100 Sobic003G128400--Sobic010G255100 Sobic002G156100--Sobic003G162800 Sobic002G156100--Sobic001G375000 Sobic002G156100--Sobic003G128400 Sobic002G156100--Sobic001G382800 Sobic002G156100--Sobic003G045300 Sobic002G156100--Sobic010G255100 Sobic002G156100--Sobic008G067100 Sobic005G014700 Sobic005G014700 Sobic002G156100--Sobic005G014700 Sobic001G424300 Sobic001G424300 Sobic002G156100--Sobic001G424300 Sobic008G090900 Sobic008G090900 Sobic008G067100--Sobic008G090900 Sobic008G067100--Sobic007G095500 Sobic004G144400 Sobic004G144400 Sobic008G067100--Sobic004G144400 Sobic008G067100--Sobic002G156100 Sobic008G067100--Sobic001G382800 Sobic008G067100--Sobic004G003900 Sobic008G067100--Sobic003G128400 Sobic004G208600 Sobic004G208600 Sobic008G067100--Sobic004G208600 Sobic002G378000 Sobic002G378000 Sobic008G067100--Sobic002G378000 Sobic001G375000--Sobic003G128400 Sobic001G375000--Sobic003G162800 Sobic006G088000 Sobic006G088000 Sobic001G375000--Sobic006G088000 Sobic001G375000--Sobic004G003900 Sobic001G375000--Sobic003G045300 Sobic010G027200 Sobic010G027200 Sobic001G375000--Sobic010G027200 Sobic001G448600 Sobic001G448600 Sobic001G375000--Sobic001G448600 Sobic006G237100 Sobic006G237100 Sobic001G375000--Sobic006G237100 Sobic001G375000--Sobic002G156100 Sobic001G202000--Sobic004G208600 Sobic001G261573 Sobic001G261573 Sobic001G202000--Sobic001G261573 Sobic001G202000--Sobic001G494500 Sobic001G384800 Sobic001G384800 Sobic001G202000--Sobic001G384800 Sobic001G202000--Sobic003G128400 Sobic007G013000 Sobic007G013000 Sobic001G202000--Sobic007G013000 Sobic001G202000--Sobic003G045300 Sobic004G020800 Sobic004G020800 Sobic001G202000--Sobic004G020800 Sobic001G202000--Sobic004G225600 Sobic007G095500--Sobic008G067100 Sobic007G095500--Sobic004G208600 Sobic007G095500--Sobic004G225600 Sobic007G095500--Sobic001G382800 Sobic002G293600 Sobic002G293600 Sobic007G095500--Sobic002G293600 Sobic002G343400 Sobic002G343400 Sobic007G095500--Sobic002G343400 Sobic007G095500--Sobic008G090900 Sobic007G095500--Sobic001G494500 Sobic006G058100 Sobic006G058100 Sobic007G095500--Sobic006G058100 Sobic003G232700 Sobic003G232700 Sobic002G043600--Sobic003G232700 Sobic002G181000 Sobic002G181000 Sobic002G043600--Sobic002G181000 Sobic001G516901 Sobic001G516901 Sobic002G043600--Sobic001G516901 Sobic003G352500 Sobic003G352500 Sobic002G043600--Sobic003G352500 Sobic004G163800 Sobic004G163800 Sobic002G043600--Sobic004G163800 Sobic001G495200 Sobic001G495200 Sobic002G043600--Sobic001G495200 Sobic004G011300 Sobic004G011300 Sobic002G043600--Sobic004G011300 Sobic005G002900 Sobic005G002900 Sobic002G043600--Sobic005G002900 Sobic005G231100 Sobic005G231100 Sobic002G043600--Sobic005G231100 Sobic001G022500 Sobic001G022500 Sobic004G225600--Sobic001G022500 Sobic004G225600--Sobic004G208600 Sobic004G225600--Sobic003G162800 Sobic001G099000 Sobic001G099000 Sobic004G225600--Sobic001G099000 Sobic004G225600--Sobic007G095500 Sobic004G225600--Sobic006G058100 Sobic004G225600--Sobic001G375000 Sobic003G434700 Sobic003G434700 Sobic004G225600--Sobic003G434700 Sobic004G225600--Sobic005G184300
Octagon: transcription factors


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