Gene annotation
Transcriptome id Sobic.001G293300.1
Synonym Sb01g028650
Functional annotation chaperonin, putative, expressed
UniProt C5WRF6
Pfam PF00166
Panther DB PTHR10772:SF13 PTHR10772
NCBI CDD KOG1641; Mitochondrial chaperonin
KEGG Orthology K04078; groES, chaperonin GroES
Gene Ontology GO:0005737; cytoplasm GO:0006457protein folding


Orthologs (automatic annotation)
TAIR AT3G60210 : GroES-like family protein
RAP-DB (Rice) LOC_Os10g41710.1 : chaperonin, putative, expressed
MaizeGDB (Corn) Zm00025a003432 , Zm00025a006573 , Zm00025a051867
Brachypodium KQJ97859
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G293300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G433100 expressed protein -
2 Sobic.007G126900 heat shock protein DnaJ, putative, expressed -
3 Sobic.004G214400 tic20, putative, expressed -
4 Sobic.002G156100 phosphoglycerate mutase, putative, expressed -
5 Sobic.003G298400 expressed protein -
6 Sobic.006G021800 uncharacterized protein family UPF0016 domain containing protein, expressed -
7 Sobic.001G445200 expressed protein -
8 Sobic.001G382800 ABC transporter, ATP-binding protein, putative, expressed K09013: Fe-S cluster assembly ATP-binding protein
9 Sobic.008G090900 expressed protein -
10 Sobic.001G305700 Mur ligase family protein, putative, expressed -
11 Sobic.008G004800 "ferritin-1, chloroplast precursor"("PubMedID : 26759170,PubMedID : 24597475")@ferritin-1, chloroplast precursor, putative, expressed K00522: ferritin heavy chain
12 Sobic.001G531400 riboflavin biosynthesis protein ribD, putative, expressed K11752: diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
13 Sobic.001G401700 aminotransferase, classes I and II, domain containing protein, expressed K10206: LL-diaminopimelate aminotransferase
14 Sobic.006G088000 translocon Tic40, putative, expressed -
15 Sobic.006G076601 - -
16 Sobic.001G375000 OsClp5 - Putative Clp protease homologue, expressed -
17 Sobic.003G128400 OsClp1 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
18 Sobic.004G018100 glutamyl-tRNA synthetase, putative, expressed K01885: EARS, glutamyl-tRNA synthetase
19 Sobic.003G381900 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, putative, expressed K00991: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
20 Sobic.008G067100 phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase, putative, expressed K14153: hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase


Gene co-expression network
sample Sobic001G293300 Sobic001G293300 Sobic001G433100 Sobic001G433100 Sobic001G293300--Sobic001G433100 Sobic007G126900 Sobic007G126900 Sobic001G293300--Sobic007G126900 Sobic004G214400 Sobic004G214400 Sobic001G293300--Sobic004G214400 Sobic002G156100 Sobic002G156100 Sobic001G293300--Sobic002G156100 Sobic003G298400 Sobic003G298400 Sobic001G293300--Sobic003G298400 Sobic006G021800 Sobic006G021800 Sobic001G293300--Sobic006G021800 Sobic001G445200 Sobic001G445200 Sobic001G293300--Sobic001G445200 Sobic001G382800 Sobic001G382800 Sobic001G293300--Sobic001G382800 Sobic008G090900 Sobic008G090900 Sobic001G293300--Sobic008G090900 Sobic001G401700 Sobic001G401700 Sobic001G433100--Sobic001G401700 Sobic001G433100--Sobic007G126900 Sobic001G433100--Sobic008G090900 Sobic006G088000 Sobic006G088000 Sobic001G433100--Sobic006G088000 Sobic001G478600 Sobic001G478600 Sobic001G433100--Sobic001G478600 Sobic001G433100--Sobic004G214400 Sobic004G003900 Sobic004G003900 Sobic001G433100--Sobic004G003900 Sobic001G433100--Sobic001G293300 Sobic003G345900 Sobic003G345900 Sobic001G433100--Sobic003G345900 Sobic007G126900--Sobic001G382800 Sobic007G126900--Sobic001G433100 Sobic007G126900--Sobic002G156100 Sobic007G126900--Sobic001G293300 Sobic003G162800 Sobic003G162800 Sobic007G126900--Sobic003G162800 Sobic001G375000 Sobic001G375000 Sobic007G126900--Sobic001G375000 Sobic001G003900 Sobic001G003900 Sobic007G126900--Sobic001G003900 Sobic002G343400 Sobic002G343400 Sobic007G126900--Sobic002G343400 Sobic010G255100 Sobic010G255100 Sobic007G126900--Sobic010G255100 Sobic004G214400--Sobic001G375000 Sobic004G263200 Sobic004G263200 Sobic004G214400--Sobic004G263200 Sobic006G281066 Sobic006G281066 Sobic004G214400--Sobic006G281066 Sobic007G101300 Sobic007G101300 Sobic004G214400--Sobic007G101300 Sobic004G214400--Sobic006G088000 Sobic004G214400--Sobic001G433100 Sobic010G027200 Sobic010G027200 Sobic004G214400--Sobic010G027200 Sobic006G237100 Sobic006G237100 Sobic004G214400--Sobic006G237100 Sobic004G214400--Sobic004G003900 Sobic002G156100--Sobic003G162800 Sobic002G156100--Sobic001G375000 Sobic003G128400 Sobic003G128400 Sobic002G156100--Sobic003G128400 Sobic002G156100--Sobic001G382800 Sobic003G045300 Sobic003G045300 Sobic002G156100--Sobic003G045300 Sobic002G156100--Sobic010G255100 Sobic008G067100 Sobic008G067100 Sobic002G156100--Sobic008G067100 Sobic005G014700 Sobic005G014700 Sobic002G156100--Sobic005G014700 Sobic001G424300 Sobic001G424300 Sobic002G156100--Sobic001G424300 Sobic001G437200 Sobic001G437200 Sobic003G298400--Sobic001G437200 Sobic009G131600 Sobic009G131600 Sobic003G298400--Sobic009G131600 Sobic007G116100 Sobic007G116100 Sobic003G298400--Sobic007G116100 Sobic003G298400--Sobic001G445200 Sobic003G298400--Sobic001G424300 Sobic003G298400--Sobic006G237100 Sobic003G298400--Sobic002G156100 Sobic003G298400--Sobic001G375000 Sobic010G073700 Sobic010G073700 Sobic003G298400--Sobic010G073700 Sobic006G021800--Sobic006G088000 Sobic006G021800--Sobic001G382800 Sobic006G021800--Sobic008G090900 Sobic006G021800--Sobic001G375000 Sobic006G021800--Sobic004G214400 Sobic006G021800--Sobic001G433100 Sobic004G018100 Sobic004G018100 Sobic006G021800--Sobic004G018100 Sobic004G249600 Sobic004G249600 Sobic006G021800--Sobic004G249600 Sobic006G021800--Sobic001G293300 Sobic001G445200--Sobic006G237100 Sobic005G009300 Sobic005G009300 Sobic001G445200--Sobic005G009300 Sobic001G445200--Sobic001G437200 Sobic001G281500 Sobic001G281500 Sobic001G445200--Sobic001G281500 Sobic002G404900 Sobic002G404900 Sobic001G445200--Sobic002G404900 Sobic003G310100 Sobic003G310100 Sobic001G445200--Sobic003G310100 Sobic001G445200--Sobic002G156100 Sobic002G409900 Sobic002G409900 Sobic001G445200--Sobic002G409900 Sobic001G445200--Sobic003G162800 Sobic001G382800--Sobic010G255100 Sobic001G382800--Sobic003G128400 Sobic001G382800--Sobic008G090900 Sobic001G382800--Sobic001G003900 Sobic001G382800--Sobic002G156100 Sobic001G382800--Sobic001G375000 Sobic001G382800--Sobic006G088000 Sobic002G293600 Sobic002G293600 Sobic001G382800--Sobic002G293600 Sobic001G382800--Sobic003G045300 Sobic008G090900--Sobic004G003900 Sobic009G092900 Sobic009G092900 Sobic008G090900--Sobic009G092900 Sobic002G181132 Sobic002G181132 Sobic008G090900--Sobic002G181132 Sobic008G090900--Sobic001G382800 Sobic008G090900--Sobic008G067100 Sobic008G090900--Sobic003G045300 Sobic008G090900--Sobic001G375000 Sobic008G090900--Sobic003G128400 Sobic008G090900--Sobic006G088000
Octagon: transcription factors


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