Gene annotation
Transcriptome id Sobic.001G445200.3,Sobic.001G445200.1,Sobic.001G445200.2
Synonym Sb01g041840
Functional annotation expressed protein
UniProt C5WRP2 , A0A1Z5SAI9
Pfam -
Panther DB PTHR37217
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G41950 : -
RAP-DB (Rice) LOC_Os03g12560.1 : expressed protein
MaizeGDB (Corn) Zm00025a001450
Brachypodium KQK22715 , KQK22716
Barley HORVU4Hr1G065180.1
Wheat TraesCS4D02G234600 , TraesCS4A02G077300
Populus -


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cDNA sequences
Sobic.001G445200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G237100 amidase, putative, expressed K02433: gatA, aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A
2 Sobic.005G009300 expressed protein -
3 Sobic.001G437200 ATP-dependent Clp protease ATP-binding subunit, putative, expressed -
4 Sobic.001G281500 OsClp11 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
5 Sobic.002G404900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA pseudouridine synthase, putative, expressed -
6 Sobic.003G310100 ABC transporter, ATP-binding protein, putative, expressed -
7 Sobic.002G156100 phosphoglycerate mutase, putative, expressed -
8 Sobic.002G409900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@spo0B-associated GTP-binding protein, putative, expressed -
9 Sobic.003G162800 expressed protein -
10 Sobic.001G375000 OsClp5 - Putative Clp protease homologue, expressed -
11 Sobic.003G298400 expressed protein -
12 Sobic.004G214400 tic20, putative, expressed -
13 Sobic.001G424300 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K08081: tropinone reductase I
14 Sobic.002G181132 - -
15 Sobic.009G137000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monooxygenase, putative, expressed -
16 Sobic.007G116100 thioredoxin, putative, expressed -
17 Sobic.010G027200 OsClp9 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
18 Sobic.001G293300 chaperonin, putative, expressed K04078: groES, chaperonin GroES
19 Sobic.009G131600 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
20 Sobic.001G305700 Mur ligase family protein, putative, expressed -


Gene co-expression network
sample Sobic001G445200 Sobic001G445200 Sobic006G237100 Sobic006G237100 Sobic001G445200--Sobic006G237100 Sobic005G009300 Sobic005G009300 Sobic001G445200--Sobic005G009300 Sobic001G437200 Sobic001G437200 Sobic001G445200--Sobic001G437200 Sobic001G281500 Sobic001G281500 Sobic001G445200--Sobic001G281500 Sobic002G404900 Sobic002G404900 Sobic001G445200--Sobic002G404900 Sobic003G310100 Sobic003G310100 Sobic001G445200--Sobic003G310100 Sobic002G156100 Sobic002G156100 Sobic001G445200--Sobic002G156100 Sobic002G409900 Sobic002G409900 Sobic001G445200--Sobic002G409900 Sobic003G162800 Sobic003G162800 Sobic001G445200--Sobic003G162800 Sobic006G237100--Sobic001G281500 Sobic010G027200 Sobic010G027200 Sobic006G237100--Sobic010G027200 Sobic001G375000 Sobic001G375000 Sobic006G237100--Sobic001G375000 Sobic006G237100--Sobic002G404900 Sobic002G140000 Sobic002G140000 Sobic006G237100--Sobic002G140000 Sobic001G161400 Sobic001G161400 Sobic006G237100--Sobic001G161400 Sobic006G237100--Sobic001G437200 Sobic007G116100 Sobic007G116100 Sobic006G237100--Sobic007G116100 Sobic006G237100--Sobic003G310100 Sobic005G009300--Sobic001G445200 Sobic005G009300--Sobic002G404900 Sobic005G009300--Sobic003G162800 Sobic005G009300--Sobic006G237100 Sobic005G009300--Sobic002G409900 Sobic009G137000 Sobic009G137000 Sobic005G009300--Sobic009G137000 Sobic001G395300 Sobic001G395300 Sobic005G009300--Sobic001G395300 Sobic003G170200 Sobic003G170200 Sobic005G009300--Sobic003G170200 Sobic003G283800 Sobic003G283800 Sobic005G009300--Sobic003G283800 Sobic003G298400 Sobic003G298400 Sobic001G437200--Sobic003G298400 Sobic001G437200--Sobic006G237100 Sobic001G437200--Sobic003G310100 Sobic001G437200--Sobic002G404900 Sobic009G131600 Sobic009G131600 Sobic001G437200--Sobic009G131600 Sobic001G424300 Sobic001G424300 Sobic001G437200--Sobic001G424300 Sobic001G437200--Sobic001G445200 Sobic003G286300 Sobic003G286300 Sobic001G437200--Sobic003G286300 Sobic001G437200--Sobic001G161400 Sobic001G281500--Sobic006G237100 Sobic001G281500--Sobic007G116100 Sobic006G107600 Sobic006G107600 Sobic001G281500--Sobic006G107600 Sobic001G099000 Sobic001G099000 Sobic001G281500--Sobic001G099000 Sobic001G281500--Sobic001G375000 Sobic007G171800 Sobic007G171800 Sobic001G281500--Sobic007G171800 Sobic006G263800 Sobic006G263800 Sobic001G281500--Sobic006G263800 Sobic001G281500--Sobic010G027200 Sobic005G184300 Sobic005G184300 Sobic001G281500--Sobic005G184300 Sobic002G404900--Sobic006G237100 Sobic002G404900--Sobic009G137000 Sobic002G404900--Sobic001G395300 Sobic002G404900--Sobic001G437200 Sobic009G036300 Sobic009G036300 Sobic002G404900--Sobic009G036300 Sobic002G404900--Sobic001G161400 Sobic002G404900--Sobic005G009300 Sobic002G404900--Sobic001G445200 Sobic006G204100 Sobic006G204100 Sobic002G404900--Sobic006G204100 Sobic003G310100--Sobic001G424300 Sobic002G056800 Sobic002G056800 Sobic003G310100--Sobic002G056800 Sobic001G196200 Sobic001G196200 Sobic003G310100--Sobic001G196200 Sobic001G489800 Sobic001G489800 Sobic003G310100--Sobic001G489800 Sobic003G310100--Sobic001G437200 Sobic003G310100--Sobic001G281500 Sobic003G310100--Sobic006G237100 Sobic002G424100 Sobic002G424100 Sobic003G310100--Sobic002G424100 Sobic006G111600 Sobic006G111600 Sobic003G310100--Sobic006G111600 Sobic002G156100--Sobic003G162800 Sobic002G156100--Sobic001G375000 Sobic003G128400 Sobic003G128400 Sobic002G156100--Sobic003G128400 Sobic001G382800 Sobic001G382800 Sobic002G156100--Sobic001G382800 Sobic003G045300 Sobic003G045300 Sobic002G156100--Sobic003G045300 Sobic010G255100 Sobic010G255100 Sobic002G156100--Sobic010G255100 Sobic008G067100 Sobic008G067100 Sobic002G156100--Sobic008G067100 Sobic005G014700 Sobic005G014700 Sobic002G156100--Sobic005G014700 Sobic002G156100--Sobic001G424300 Sobic002G409900--Sobic001G445200 Sobic002G409900--Sobic005G009300 Sobic007G027000 Sobic007G027000 Sobic002G409900--Sobic007G027000 Sobic002G409900--Sobic002G156100 Sobic003G345900 Sobic003G345900 Sobic002G409900--Sobic003G345900 Sobic001G293300 Sobic001G293300 Sobic002G409900--Sobic001G293300 Sobic002G409900--Sobic003G162800 Sobic003G158300 Sobic003G158300 Sobic002G409900--Sobic003G158300 Sobic002G409900--Sobic002G404900 Sobic003G162800--Sobic001G375000 Sobic003G327200 Sobic003G327200 Sobic003G162800--Sobic003G327200 Sobic003G162800--Sobic002G156100 Sobic003G162800--Sobic003G345900 Sobic002G181132 Sobic002G181132 Sobic003G162800--Sobic002G181132 Sobic004G003900 Sobic004G003900 Sobic003G162800--Sobic004G003900 Sobic003G162800--Sobic003G045300 Sobic001G514100 Sobic001G514100 Sobic003G162800--Sobic001G514100 Sobic003G162800--Sobic010G027200
Octagon: transcription factors


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