Gene annotation
Transcriptome id Sobic.010G043100.1
Synonym Sb10g003800
Functional annotation serine esterase family protein, putative, expressed
UniProt A0A194YH78
Pfam PF05057
Panther DB PTHR12482 PTHR12482:SF11
NCBI CDD KOG4372; Predicted alpha/beta hydrolase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G29120 : Hydrolase-like protein family
RAP-DB (Rice) LOC_Os06g06080.1 : serine esterase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a049993
Brachypodium KQK19574 , KQK19573 , KQK19572
Barley HORVU7Hr1G023560.59 , HORVU7Hr1G023560.58 , HORVU7Hr1G023560.51 , HORVU7Hr1G023560.50 , HORVU7Hr1G023560.53 , HORVU7Hr1G023560.52 , HORVU7Hr1G023560.55 , HORVU7Hr1G023560.54 , HORVU7Hr1G023560.57 , HORVU7Hr1G023560.56 , HORVU7Hr1G023560.9 , HORVU7Hr1G023560.8 , HORVU7Hr1G023560.1 , HORVU7Hr1G023560.4 , HORVU7Hr1G023560.7 , HORVU7Hr1G023560.40 , HORVU7Hr1G023560.48 , HORVU7Hr1G023560.49 , HORVU7Hr1G023560.46 , HORVU7Hr1G023560.47 , HORVU7Hr1G023560.44 , HORVU7Hr1G023560.45 , HORVU7Hr1G023560.42 , HORVU7Hr1G023560.43 , HORVU7Hr1G023560.39 , HORVU7Hr1G023560.38 , HORVU7Hr1G023560.31 , HORVU7Hr1G023560.30 , HORVU7Hr1G023560.37 , HORVU7Hr1G023560.36 , HORVU7Hr1G023560.35 , HORVU7Hr1G023560.34 , HORVU7Hr1G023560.28 , HORVU7Hr1G023560.29 , HORVU7Hr1G023560.20 , HORVU7Hr1G023560.21 , HORVU7Hr1G023560.22 , HORVU7Hr1G023560.23 , HORVU7Hr1G023560.24 , HORVU7Hr1G023560.25 , HORVU7Hr1G023560.26 , HORVU7Hr1G023560.27 , HORVU7Hr1G023560.19 , HORVU7Hr1G023560.18 , HORVU7Hr1G023560.14 , HORVU7Hr1G023560.17 , HORVU7Hr1G023560.16 , HORVU7Hr1G023560.11 , HORVU7Hr1G023560.13 , HORVU7Hr1G023560.12 , HORVU7Hr1G023560.60 , HORVU7Hr1G023560.61 , HORVU7Hr1G023560.62 , HORVU7Hr1G023560.63 , HORVU7Hr1G023560.41
Wheat TraesCS7A02G110400 , TraesCS7B02G008200 , TraesCS7D02G105700
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G011600 expressed protein -
2 Sobic.008G081900 ATP-dependent Clp protease ATP-binding subunit clpA homolog,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
3 Sobic.010G272800 OsFtsH1 FtsH protease, homologue of AtFtsH1/5, expressed K03798: ftsH, cell division protease FtsH
4 Sobic.002G129400 ABC transporter, ATP-binding protein, putative, expressed -
5 Sobic.001G223550 - -
6 Sobic.004G034600 hydrolase, alpha/beta fold family domain containing protein, expressed -
7 Sobic.010G020800 aminotransferase, classes I and II, domain containing protein, expressed K14270: aminotransferase
8 Sobic.001G517800 NIN, putative, expressed -
9 Sobic.007G169300 expressed protein -
10 Sobic.001G459600 expressed protein -
11 Sobic.007G185300 - -
12 Sobic.007G166200 PPDK(PubMedID : 19549309)@NADP-malete dehydrogenase(PubMedID : 26904072)@NADP-malate dehydrogenase (NADP-MDH)(PubMedID : 16243851)@lactate/malate dehydrogenase, putative, expressed K00051: malate dehydrogenase (NADP+)
13 Sobic.001G252000 uridylyltransferase-related, putative, expressed -
14 Sobic.005G149200 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
15 Sobic.002G249300 auxin efflux carrier component, putative, expressed -
16 Sobic.001G219700 pentatricopeptide, putative, expressed -
17 Sobic.002G349100 pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed -
18 Sobic.009G241200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
19 Sobic.009G093100 OsAGSW1(Ortholog in rice:Li and Li 2015)(PubMedID : 31659923)@ ELMO/CED-12 family protein, putative, expressed -
20 Sobic.004G307100 M16 domain containing zinc peptidase, putative, expressed K06972: PITRM1, PreP, presequence protease


Gene co-expression network
sample Sobic010G043100 Sobic010G043100 Sobic009G011600 Sobic009G011600 Sobic010G043100--Sobic009G011600 Sobic008G081900 Sobic008G081900 Sobic010G043100--Sobic008G081900 Sobic010G272800 Sobic010G272800 Sobic010G043100--Sobic010G272800 Sobic002G129400 Sobic002G129400 Sobic010G043100--Sobic002G129400 Sobic001G223550 Sobic001G223550 Sobic010G043100--Sobic001G223550 Sobic004G034600 Sobic004G034600 Sobic010G043100--Sobic004G034600 Sobic010G020800 Sobic010G020800 Sobic010G043100--Sobic010G020800 Sobic001G517800 Sobic001G517800 Sobic010G043100--Sobic001G517800 Sobic007G169300 Sobic007G169300 Sobic010G043100--Sobic007G169300 Sobic009G011600--Sobic004G034600 Sobic009G011600--Sobic001G517800 Sobic001G496100 Sobic001G496100 Sobic009G011600--Sobic001G496100 Sobic005G149700 Sobic005G149700 Sobic009G011600--Sobic005G149700 Sobic009G011600--Sobic010G020800 Sobic009G011600--Sobic007G169300 Sobic002G249300 Sobic002G249300 Sobic009G011600--Sobic002G249300 Sobic005G149200 Sobic005G149200 Sobic009G011600--Sobic005G149200 Sobic009G011600--Sobic010G043100 Sobic008G081900--Sobic002G129400 Sobic001G219700 Sobic001G219700 Sobic008G081900--Sobic001G219700 Sobic004G307100 Sobic004G307100 Sobic008G081900--Sobic004G307100 Sobic010G035500 Sobic010G035500 Sobic008G081900--Sobic010G035500 Sobic007G166200 Sobic007G166200 Sobic008G081900--Sobic007G166200 Sobic008G081900--Sobic007G169300 Sobic004G300000 Sobic004G300000 Sobic008G081900--Sobic004G300000 Sobic004G026500 Sobic004G026500 Sobic008G081900--Sobic004G026500 Sobic006G030400 Sobic006G030400 Sobic008G081900--Sobic006G030400 Sobic010G223200 Sobic010G223200 Sobic010G272800--Sobic010G223200 Sobic003G301500 Sobic003G301500 Sobic010G272800--Sobic003G301500 Sobic010G272800--Sobic002G129400 Sobic010G272800--Sobic010G043100 Sobic001G062300 Sobic001G062300 Sobic010G272800--Sobic001G062300 Sobic010G272800--Sobic001G223550 Sobic009G241200 Sobic009G241200 Sobic010G272800--Sobic009G241200 Sobic010G272800--Sobic009G011600 Sobic010G272800--Sobic010G020800 Sobic002G129400--Sobic007G166200 Sobic002G129400--Sobic008G081900 Sobic002G072400 Sobic002G072400 Sobic002G129400--Sobic002G072400 Sobic002G349100 Sobic002G349100 Sobic002G129400--Sobic002G349100 Sobic002G081400 Sobic002G081400 Sobic002G129400--Sobic002G081400 Sobic009G093100 Sobic009G093100 Sobic002G129400--Sobic009G093100 Sobic003G203300 Sobic003G203300 Sobic002G129400--Sobic003G203300 Sobic006G065100 Sobic006G065100 Sobic002G129400--Sobic006G065100 Sobic002G129400--Sobic001G219700 Sobic010G145500 Sobic010G145500 Sobic001G223550--Sobic010G145500 Sobic001G223550--Sobic004G034600 Sobic001G223550--Sobic002G249300 Sobic005G133600 Sobic005G133600 Sobic001G223550--Sobic005G133600 Sobic008G101100 Sobic008G101100 Sobic001G223550--Sobic008G101100 Sobic005G089400 Sobic005G089400 Sobic001G223550--Sobic005G089400 Sobic001G233300 Sobic001G233300 Sobic001G223550--Sobic001G233300 Sobic008G081800 Sobic008G081800 Sobic001G223550--Sobic008G081800 Sobic001G459600 Sobic001G459600 Sobic001G223550--Sobic001G459600 Sobic004G034600--Sobic005G149700 Sobic004G034600--Sobic002G249300 Sobic004G034600--Sobic001G517800 Sobic004G034600--Sobic009G011600 Sobic002G266000 Sobic002G266000 Sobic004G034600--Sobic002G266000 Sobic004G034600--Sobic001G459600 Sobic003G322700 Sobic003G322700 Sobic004G034600--Sobic003G322700 Sobic004G034600--Sobic001G223550 Sobic004G261900 Sobic004G261900 Sobic004G034600--Sobic004G261900 Sobic003G190400 Sobic003G190400 Sobic010G020800--Sobic003G190400 Sobic010G020800--Sobic001G517800 Sobic004G001500 Sobic004G001500 Sobic010G020800--Sobic004G001500 Sobic007G190000 Sobic007G190000 Sobic010G020800--Sobic007G190000 Sobic002G146300 Sobic002G146300 Sobic010G020800--Sobic002G146300 Sobic003G301900 Sobic003G301900 Sobic010G020800--Sobic003G301900 Sobic010G020800--Sobic009G011600 Sobic001G446850 Sobic001G446850 Sobic010G020800--Sobic001G446850 Sobic006G240400 Sobic006G240400 Sobic010G020800--Sobic006G240400 Sobic001G517800--Sobic001G459600 Sobic001G517800--Sobic003G301900 Sobic001G517800--Sobic004G034600 Sobic001G517800--Sobic010G020800 Sobic001G517800--Sobic009G011600 Sobic001G517800--Sobic005G149200 Sobic003G320700 Sobic003G320700 Sobic001G517800--Sobic003G320700 Sobic001G517800--Sobic003G322700 Sobic001G517800--Sobic002G146300 Sobic007G227700 Sobic007G227700 Sobic007G169300--Sobic007G227700 Sobic007G169300--Sobic008G081900 Sobic007G169300--Sobic006G030400 Sobic002G193100 Sobic002G193100 Sobic007G169300--Sobic002G193100 Sobic007G169300--Sobic002G129400 Sobic007G169300--Sobic009G011600 Sobic007G169300--Sobic002G349100 Sobic007G169300--Sobic004G026500 Sobic010G058200 Sobic010G058200 Sobic007G169300--Sobic010G058200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.