Gene annotation
Transcriptome id Sobic.004G092900.1
Synonym Sb04g007610, ATAPM1, APM1
Functional annotation puromycin-sensitive aminopeptidase, putative, expressed
UniProt C5XY28
Pfam PF11838 PF01433
Panther DB PTHR11533 PTHR11533:SF189
NCBI CDD -
KEGG Orthology K08776; puromycin-sensitive aminopeptidase
Gene Ontology GO:0008270; zinc ion binding GO:0008237metallopeptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT4G33090 : aminopeptidase M1
RAP-DB (Rice) LOC_Os02g12650.1 : puromycin-sensitive aminopeptidase, putative, expressed
MaizeGDB (Corn) Zm00025a020199 , Zm00025a043294
Brachypodium PNT66172 , PNT66171 , KQJ94037 , KQJ94038
Barley HORVU6Hr1G039140.8 , HORVU6Hr1G039140.9 , HORVU6Hr1G039140.5 , HORVU6Hr1G039140.4 , HORVU6Hr1G039140.7 , HORVU6Hr1G039140.6 , HORVU6Hr1G039140.3 , HORVU6Hr1G039140.2 , HORVU6Hr1G039140.11 , HORVU6Hr1G039140.10 , HORVU6Hr1G039140.1
Wheat TraesCS6B02G213700 , TraesCS6A02G182500 , TraesCS6D02G171800 , TraesCS6D02G171800 , TraesCS6D02G171800
Populus PNT33097 , PNT33096 , PNT33095 , PNT33094


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cDNA sequences
Sobic.004G092900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G424700 ATPOT1, putative, expressed -
2 Sobic.007G185300 - -
3 Sobic.004G026500 expressed protein -
4 Sobic.002G339300 myosin-Vb, putative, expressed K10357: myosin V
5 Sobic.001G145000 expressed protein K14376: poly(A) polymerase
6 Sobic.010G197000 M16 domain containing zinc peptidase, putative, expressed -
7 Sobic.009G193500 AGAP007115-PA, putative, expressed -
8 Sobic.001G029200 phosphoesterase family protein, putative, expressed K01114: phospholipase C
9 Sobic.002G115075 - -
10 Sobic.001G512500 expressed protein -
11 Sobic.008G081900 ATP-dependent Clp protease ATP-binding subunit clpA homolog,chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
12 Sobic.010G140600 bolA, putative, expressed -
13 Sobic.007G227700 expressed protein -
14 Sobic.008G172300 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
15 Sobic.007G103100 SWP, putative, expressed K15156: MED14, mediator of RNA polymerase II transcription subunit 14
16 Sobic.001G219700 pentatricopeptide, putative, expressed -
17 Sobic.001G252000 uridylyltransferase-related, putative, expressed -
18 Sobic.003G306600 acetamidase, putative, expressed K01455: formamidase
19 Sobic.001G124100 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
20 Sobic.010G109600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@angel, putative, expressed -


Gene co-expression network
sample Sobic004G092900 Sobic004G092900 Sobic002G424700 Sobic002G424700 Sobic004G092900--Sobic002G424700 Sobic007G185300 Sobic007G185300 Sobic004G092900--Sobic007G185300 Sobic004G026500 Sobic004G026500 Sobic004G092900--Sobic004G026500 Sobic002G339300 Sobic002G339300 Sobic004G092900--Sobic002G339300 Sobic001G145000 Sobic001G145000 Sobic004G092900--Sobic001G145000 Sobic010G197000 Sobic010G197000 Sobic004G092900--Sobic010G197000 Sobic009G193500 Sobic009G193500 Sobic004G092900--Sobic009G193500 Sobic001G029200 Sobic001G029200 Sobic004G092900--Sobic001G029200 Sobic002G115075 Sobic002G115075 Sobic004G092900--Sobic002G115075 Sobic002G424700--Sobic001G145000 Sobic004G334300 Sobic004G334300 Sobic002G424700--Sobic004G334300 Sobic004G244900 Sobic004G244900 Sobic002G424700--Sobic004G244900 Sobic001G519900 Sobic001G519900 Sobic002G424700--Sobic001G519900 Sobic007G103100 Sobic007G103100 Sobic002G424700--Sobic007G103100 Sobic002G424700--Sobic007G185300 Sobic002G275700 Sobic002G275700 Sobic002G424700--Sobic002G275700 Sobic005G072100 Sobic005G072100 Sobic002G424700--Sobic005G072100 Sobic007G090403 Sobic007G090403 Sobic002G424700--Sobic007G090403 Sobic003G179350 Sobic003G179350 Sobic007G185300--Sobic003G179350 Sobic002G173100 Sobic002G173100 Sobic007G185300--Sobic002G173100 Sobic003G190100 Sobic003G190100 Sobic007G185300--Sobic003G190100 Sobic003G306600 Sobic003G306600 Sobic007G185300--Sobic003G306600 Sobic002G244200 Sobic002G244200 Sobic007G185300--Sobic002G244200 Sobic008G081900 Sobic008G081900 Sobic007G185300--Sobic008G081900 Sobic007G185300--Sobic007G090403 Sobic005G133600 Sobic005G133600 Sobic007G185300--Sobic005G133600 Sobic007G185300--Sobic002G424700 Sobic008G172300 Sobic008G172300 Sobic004G026500--Sobic008G172300 Sobic001G124100 Sobic001G124100 Sobic004G026500--Sobic001G124100 Sobic004G026500--Sobic009G193500 Sobic001G219700 Sobic001G219700 Sobic004G026500--Sobic001G219700 Sobic001G072700 Sobic001G072700 Sobic004G026500--Sobic001G072700 Sobic004G026500--Sobic002G339300 Sobic003G203300 Sobic003G203300 Sobic004G026500--Sobic003G203300 Sobic007G227700 Sobic007G227700 Sobic004G026500--Sobic007G227700 Sobic002G276100 Sobic002G276100 Sobic004G026500--Sobic002G276100 Sobic004G262700 Sobic004G262700 Sobic002G339300--Sobic004G262700 Sobic002G339300--Sobic004G026500 Sobic002G339300--Sobic009G193500 Sobic002G339300--Sobic001G124100 Sobic001G396000 Sobic001G396000 Sobic002G339300--Sobic001G396000 Sobic003G193200 Sobic003G193200 Sobic002G339300--Sobic003G193200 Sobic003G190000 Sobic003G190000 Sobic002G339300--Sobic003G190000 Sobic002G168500 Sobic002G168500 Sobic002G339300--Sobic002G168500 Sobic002G339300--Sobic010G197000 Sobic001G145000--Sobic002G424700 Sobic001G145000--Sobic004G334300 Sobic001G145000--Sobic002G275700 Sobic001G145000--Sobic004G244900 Sobic005G142800 Sobic005G142800 Sobic001G145000--Sobic005G142800 Sobic001G145000--Sobic007G103100 Sobic001G527800 Sobic001G527800 Sobic001G145000--Sobic001G527800 Sobic010G123600 Sobic010G123600 Sobic001G145000--Sobic010G123600 Sobic002G316600 Sobic002G316600 Sobic001G145000--Sobic002G316600 Sobic009G014100 Sobic009G014100 Sobic010G197000--Sobic009G014100 Sobic002G354600 Sobic002G354600 Sobic010G197000--Sobic002G354600 Sobic005G138600 Sobic005G138600 Sobic010G197000--Sobic005G138600 Sobic004G300000 Sobic004G300000 Sobic010G197000--Sobic004G300000 Sobic010G109600 Sobic010G109600 Sobic010G197000--Sobic010G109600 Sobic010G197000--Sobic003G190000 Sobic002G331800 Sobic002G331800 Sobic010G197000--Sobic002G331800 Sobic006G214700 Sobic006G214700 Sobic010G197000--Sobic006G214700 Sobic010G197000--Sobic008G172300 Sobic009G193500--Sobic004G026500 Sobic009G193500--Sobic002G339300 Sobic009G193500--Sobic002G276100 Sobic009G193500--Sobic001G124100 Sobic009G193500--Sobic007G103100 Sobic009G193500--Sobic002G168500 Sobic009G193500--Sobic008G172300 Sobic009G193500--Sobic001G219700 Sobic006G186600 Sobic006G186600 Sobic009G193500--Sobic006G186600 Sobic010G035500 Sobic010G035500 Sobic001G029200--Sobic010G035500 Sobic001G029200--Sobic004G300000 Sobic009G019100 Sobic009G019100 Sobic001G029200--Sobic009G019100 Sobic001G029200--Sobic008G081900 Sobic009G213800 Sobic009G213800 Sobic001G029200--Sobic009G213800 Sobic001G029200--Sobic007G227700 Sobic002G193100 Sobic002G193100 Sobic001G029200--Sobic002G193100 Sobic001G029200--Sobic004G026500 Sobic001G029200--Sobic002G339300 Sobic002G115050 Sobic002G115050 Sobic002G115075--Sobic002G115050 Sobic002G345700 Sobic002G345700 Sobic002G115075--Sobic002G345700 Sobic006G072601 Sobic006G072601 Sobic002G115075--Sobic006G072601 Sobic002G115075--Sobic002G173100 Sobic004G207400 Sobic004G207400 Sobic002G115075--Sobic004G207400 Sobic002G115075--Sobic002G244200 Sobic002G115075--Sobic005G142800 Sobic005G075100 Sobic005G075100 Sobic002G115075--Sobic005G075100 Sobic003G264800 Sobic003G264800 Sobic002G115075--Sobic003G264800
Octagon: transcription factors


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