Gene annotation
Transcriptome id Sobic.008G061401.1
Synonym -
Functional annotation -
UniProt A0A1Z5R655
Pfam PF00891
Panther DB PTHR11746 PTHR11746:SF97
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008171; O-methyltransferase activity


Orthologs (automatic annotation)
TAIR AT4G35160 : O-methyltransferase family protein
RAP-DB (Rice) LOC_Os08g35310.1 : O-methyltransferase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G234400 CA(PubMedID : 19549309)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
2 Sobic.009G043000 thioredoxin, putative, expressed -
3 Sobic.006G067400 Ser/Thr protein phosphatase family protein, putative, expressed -
4 Sobic.003G370000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chlorophyll A-B binding protein, putative, expressed K03542: photosystem II 22kDa protein
5 Sobic.010G153900 Spermidine synthase(PubMedID : 27325899)@Up-regulated by silicon application under drought stress(PubMedID : 24813726)@"OsSPMS1(Ortholog in rice:Tao et al., 2018)"(PubMedID : 31659935)@spermidine synthase, putative, expressed K00797: speE, SRM, spermidine synthase
6 Sobic.005G200200 expressed protein -
7 Sobic.008G188600 glyoxalase family protein, putative, expressed -
8 Sobic.007G173800 uncharacterized protein ycf39, putative, expressed -
9 Sobic.001G076900 Uncharacterised protein family (UPF0497)(PubMedID : 26465154)@membrane associated DUF588 domain containing protein, putative, expressed -
10 Sobic.005G202500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tropinone reductase 2, putative, expressed K08081: tropinone reductase I
11 Sobic.010G201700 GA16396-PA, putative, expressed -
12 Sobic.003G303700 Protein thylakoid membrane phosphoprotein 14 kda (Os)(PubMedID : 27208977)@expressed protein -
13 Sobic.002G277100 -(PubMedID : 29017446)@triosephosphate isomerase, chloroplast precursor, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)
14 Sobic.006G008700 bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase, putative, expressed K13811: 3'-phosphoadenosine 5'-phosphosulfate synthase
15 Sobic.007G225500 expressed protein -
16 Sobic.001G020100 expressed protein -
17 Sobic.009G210200 Acid phosphatase/vanadium-dependent haloperoxidase-related protein(PubMedID : 26465154)@Divergent PAP2 family domain containing protein, expressed -
18 Sobic.007G140800 Fatty acid desaturase 6 (omega-6 fatty acid desaturase) FAD6 (At)(PubMedID : 27208977)@omega-6 fatty acid desaturase, chloroplast precursor, putative, expressed K10255: FAD6, acyl-lipid omega-6 desaturase (Delta-12 desaturase)
19 Sobic.008G102000 Chaperone DnaJ-domain superfamily protein(PubMedID : 26465154)@heat shock protein DnaJ, putative, expressed -
20 Sobic.006G077400 PAP fibrillin family domain containing protein, expressed -


Gene co-expression network
sample Sobic008G061401 Sobic008G061401 Sobic003G234400 Sobic003G234400 Sobic008G061401--Sobic003G234400 Sobic009G043000 Sobic009G043000 Sobic008G061401--Sobic009G043000 Sobic006G067400 Sobic006G067400 Sobic008G061401--Sobic006G067400 Sobic003G370000 Sobic003G370000 Sobic008G061401--Sobic003G370000 Sobic010G153900 Sobic010G153900 Sobic008G061401--Sobic010G153900 Sobic005G200200 Sobic005G200200 Sobic008G061401--Sobic005G200200 Sobic008G188600 Sobic008G188600 Sobic008G061401--Sobic008G188600 Sobic007G173800 Sobic007G173800 Sobic008G061401--Sobic007G173800 Sobic001G076900 Sobic001G076900 Sobic008G061401--Sobic001G076900 Sobic006G008700 Sobic006G008700 Sobic003G234400--Sobic006G008700 Sobic010G095000 Sobic010G095000 Sobic003G234400--Sobic010G095000 Sobic003G303700 Sobic003G303700 Sobic003G234400--Sobic003G303700 Sobic008G021300 Sobic008G021300 Sobic003G234400--Sobic008G021300 Sobic004G353700 Sobic004G353700 Sobic003G234400--Sobic004G353700 Sobic003G234400--Sobic008G061401 Sobic003G234400--Sobic001G076900 Sobic004G026300 Sobic004G026300 Sobic003G234400--Sobic004G026300 Sobic010G201700 Sobic010G201700 Sobic003G234400--Sobic010G201700 Sobic009G043000--Sobic010G201700 Sobic003G002300 Sobic003G002300 Sobic009G043000--Sobic003G002300 Sobic008G102000 Sobic008G102000 Sobic009G043000--Sobic008G102000 Sobic001G102800 Sobic001G102800 Sobic009G043000--Sobic001G102800 Sobic007G225500 Sobic007G225500 Sobic009G043000--Sobic007G225500 Sobic004G272100 Sobic004G272100 Sobic009G043000--Sobic004G272100 Sobic006G207800 Sobic006G207800 Sobic009G043000--Sobic006G207800 Sobic009G140600 Sobic009G140600 Sobic009G043000--Sobic009G140600 Sobic001G519800 Sobic001G519800 Sobic009G043000--Sobic001G519800 Sobic006G067400--Sobic008G188600 Sobic008G171300 Sobic008G171300 Sobic006G067400--Sobic008G171300 Sobic009G059300 Sobic009G059300 Sobic006G067400--Sobic009G059300 Sobic006G067400--Sobic009G043000 Sobic001G314200 Sobic001G314200 Sobic006G067400--Sobic001G314200 Sobic007G052400 Sobic007G052400 Sobic006G067400--Sobic007G052400 Sobic009G210200 Sobic009G210200 Sobic006G067400--Sobic009G210200 Sobic009G030900 Sobic009G030900 Sobic006G067400--Sobic009G030900 Sobic006G067400--Sobic007G225500 Sobic007G161500 Sobic007G161500 Sobic003G370000--Sobic007G161500 Sobic001G289500 Sobic001G289500 Sobic003G370000--Sobic001G289500 Sobic005G056400 Sobic005G056400 Sobic003G370000--Sobic005G056400 Sobic002G370600 Sobic002G370600 Sobic003G370000--Sobic002G370600 Sobic002G314300 Sobic002G314300 Sobic003G370000--Sobic002G314300 Sobic004G305800 Sobic004G305800 Sobic003G370000--Sobic004G305800 Sobic001G020100 Sobic001G020100 Sobic003G370000--Sobic001G020100 Sobic004G238600 Sobic004G238600 Sobic003G370000--Sobic004G238600 Sobic003G370000--Sobic001G076900 Sobic007G140800 Sobic007G140800 Sobic010G153900--Sobic007G140800 Sobic010G153900--Sobic008G188600 Sobic010G153900--Sobic009G043000 Sobic010G153900--Sobic010G201700 Sobic010G153900--Sobic003G303700 Sobic010G153900--Sobic010G095000 Sobic010G153900--Sobic006G207800 Sobic003G241900 Sobic003G241900 Sobic010G153900--Sobic003G241900 Sobic010G153900--Sobic001G020100 Sobic006G077400 Sobic006G077400 Sobic005G200200--Sobic006G077400 Sobic005G200200--Sobic007G225500 Sobic005G200200--Sobic003G370000 Sobic005G200200--Sobic005G056400 Sobic005G200200--Sobic007G173800 Sobic002G277100 Sobic002G277100 Sobic005G200200--Sobic002G277100 Sobic005G200200--Sobic009G043000 Sobic005G200200--Sobic010G095000 Sobic005G200200--Sobic003G002300 Sobic003G387100 Sobic003G387100 Sobic008G188600--Sobic003G387100 Sobic008G188600--Sobic009G043000 Sobic008G188600--Sobic008G102000 Sobic008G188600--Sobic006G207800 Sobic008G188600--Sobic009G059300 Sobic008G188600--Sobic006G067400 Sobic008G188600--Sobic010G201700 Sobic008G188600--Sobic010G153900 Sobic008G188600--Sobic007G225500 Sobic007G173800--Sobic008G102000 Sobic004G359600 Sobic004G359600 Sobic007G173800--Sobic004G359600 Sobic007G173800--Sobic007G225500 Sobic007G173800--Sobic009G043000 Sobic010G277600 Sobic010G277600 Sobic007G173800--Sobic010G277600 Sobic007G173800--Sobic003G002300 Sobic009G183700 Sobic009G183700 Sobic007G173800--Sobic009G183700 Sobic007G173800--Sobic002G277100 Sobic006G238200 Sobic006G238200 Sobic007G173800--Sobic006G238200 Sobic001G076900--Sobic005G056400 Sobic001G076900--Sobic003G370000 Sobic001G076900--Sobic010G095000 Sobic001G076900--Sobic001G020100 Sobic001G076900--Sobic004G305800 Sobic001G076900--Sobic003G234400 Sobic005G202500 Sobic005G202500 Sobic001G076900--Sobic005G202500 Sobic001G076900--Sobic002G370600 Sobic004G283100 Sobic004G283100 Sobic001G076900--Sobic004G283100
Octagon: transcription factors


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