Gene annotation
Transcriptome id Sobic.005G101300.1
Synonym Sb05g008750
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
heat shock protein DnaJ, putative, expressed
UniProt C5Y1S1
Pfam PF00226
Panther DB PTHR24078 PTHR24078:SF177
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G09350 : Chaperone DnaJ-domain superfamily protein
RAP-DB (Rice) LOC_Os11g10990.1 : heat shock protein DnaJ, putative, expressed
MaizeGDB (Corn) Zm00025a029663
Brachypodium -
Barley HORVU4Hr1G016510.4 , HORVU4Hr1G016510.3 , HORVU4Hr1G016510.2 , HORVU4Hr1G016510.1
Wheat TraesCS4A02G203400 , TraesCS4D02G104200 , TraesCS4B02G107300 , TraesCS4B02G107300
Populus -


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cDNA sequences
Sobic.005G101300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G039500 genetic modifier, putative, expressed -
2 Sobic.003G367500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-1,6-bisphosphatase, putative, expressed K03841: FBP, fructose-1,6-bisphosphatase I
3 Sobic.003G024300 glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed K05941: glutathione gamma-glutamylcysteinyltransferase
4 Sobic.007G009200 adenosine monophosphate kinase(PubMedID : 26465154)@AMP kinase(PubMedID : 26976818)@adenylate kinase, putative, expressed K00939: adk, adenylate kinase
5 Sobic.003G398800 expressed protein -
6 Sobic.001G329400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1230 domain containing protein, expressed -
7 Sobic.004G356400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.001G134100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@5-AMP-activated protein kinase-related, putative, expressed -
9 Sobic.007G105500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
10 Sobic.009G129300 heat shock protein DnaJ, putative, expressed -
11 Sobic.010G181300 SOUL heme-binding protein, putative, expressed -
12 Sobic.006G238200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
13 Sobic.006G207800 Plastid-lipid associated protein PAP / fibrillin family protein(PubMedID : 26465154)@PAP fibrillin family domain containing protein, expressed -
14 Sobic.007G161500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PGR5, putative, expressed -
15 Sobic.010G188300 fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
16 Sobic.001G048400 pheophorbide a oxygenase, chloroplast precursor, putative, expressed -
17 Sobic.003G005000 expressed protein -
18 Sobic.010G067100 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
19 Sobic.001G491000 ribulose-phosphate 3-epimerase, chloroplast precursor, putative, expressed K01783: rpe, ribulose-phosphate 3-epimerase
20 Sobic.003G431700 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase


Gene co-expression network
sample Sobic005G101300 Sobic005G101300 Sobic010G039500 Sobic010G039500 Sobic005G101300--Sobic010G039500 Sobic003G367500 Sobic003G367500 Sobic005G101300--Sobic003G367500 Sobic003G024300 Sobic003G024300 Sobic005G101300--Sobic003G024300 Sobic007G009200 Sobic007G009200 Sobic005G101300--Sobic007G009200 Sobic003G398800 Sobic003G398800 Sobic005G101300--Sobic003G398800 Sobic001G329400 Sobic001G329400 Sobic005G101300--Sobic001G329400 Sobic004G356400 Sobic004G356400 Sobic005G101300--Sobic004G356400 Sobic001G134100 Sobic001G134100 Sobic005G101300--Sobic001G134100 Sobic007G105500 Sobic007G105500 Sobic005G101300--Sobic007G105500 Sobic003G127800 Sobic003G127800 Sobic010G039500--Sobic003G127800 Sobic003G005000 Sobic003G005000 Sobic010G039500--Sobic003G005000 Sobic010G039500--Sobic003G367500 Sobic010G039500--Sobic003G398800 Sobic010G039500--Sobic005G101300 Sobic010G039500--Sobic003G024300 Sobic007G161500 Sobic007G161500 Sobic010G039500--Sobic007G161500 Sobic001G491000 Sobic001G491000 Sobic010G039500--Sobic001G491000 Sobic006G238200 Sobic006G238200 Sobic010G039500--Sobic006G238200 Sobic004G215800 Sobic004G215800 Sobic003G367500--Sobic004G215800 Sobic003G367500--Sobic007G105500 Sobic003G367500--Sobic003G398800 Sobic004G154200 Sobic004G154200 Sobic003G367500--Sobic004G154200 Sobic003G367500--Sobic010G039500 Sobic002G324500 Sobic002G324500 Sobic003G367500--Sobic002G324500 Sobic003G367500--Sobic003G127800 Sobic004G059800 Sobic004G059800 Sobic003G367500--Sobic004G059800 Sobic005G089600 Sobic005G089600 Sobic003G367500--Sobic005G089600 Sobic003G024300--Sobic007G009200 Sobic006G077400 Sobic006G077400 Sobic003G024300--Sobic006G077400 Sobic003G024300--Sobic001G329400 Sobic003G024300--Sobic001G491000 Sobic009G104800 Sobic009G104800 Sobic003G024300--Sobic009G104800 Sobic003G024300--Sobic003G398800 Sobic004G125700 Sobic004G125700 Sobic003G024300--Sobic004G125700 Sobic003G024300--Sobic007G161500 Sobic010G201700 Sobic010G201700 Sobic003G024300--Sobic010G201700 Sobic009G237100 Sobic009G237100 Sobic007G009200--Sobic009G237100 Sobic007G009200--Sobic003G024300 Sobic006G207800 Sobic006G207800 Sobic007G009200--Sobic006G207800 Sobic007G009200--Sobic003G398800 Sobic007G009200--Sobic006G238200 Sobic001G102800 Sobic001G102800 Sobic007G009200--Sobic001G102800 Sobic007G009200--Sobic006G077400 Sobic007G009200--Sobic010G201700 Sobic010G035400 Sobic010G035400 Sobic007G009200--Sobic010G035400 Sobic003G398800--Sobic006G238200 Sobic003G306200 Sobic003G306200 Sobic003G398800--Sobic003G306200 Sobic009G056700 Sobic009G056700 Sobic003G398800--Sobic009G056700 Sobic003G398800--Sobic007G009200 Sobic007G103400 Sobic007G103400 Sobic003G398800--Sobic007G103400 Sobic009G129300 Sobic009G129300 Sobic003G398800--Sobic009G129300 Sobic002G220900 Sobic002G220900 Sobic003G398800--Sobic002G220900 Sobic003G431700 Sobic003G431700 Sobic003G398800--Sobic003G431700 Sobic003G398800--Sobic001G491000 Sobic001G329400--Sobic003G024300 Sobic001G329400--Sobic007G161500 Sobic006G244000 Sobic006G244000 Sobic001G329400--Sobic006G244000 Sobic001G329400--Sobic003G127800 Sobic001G329400--Sobic009G129300 Sobic007G140800 Sobic007G140800 Sobic001G329400--Sobic007G140800 Sobic004G283100 Sobic004G283100 Sobic001G329400--Sobic004G283100 Sobic001G329400--Sobic001G491000 Sobic001G329400--Sobic009G104800 Sobic001G017300 Sobic001G017300 Sobic004G356400--Sobic001G017300 Sobic005G101200 Sobic005G101200 Sobic004G356400--Sobic005G101200 Sobic006G158100 Sobic006G158100 Sobic004G356400--Sobic006G158100 Sobic003G185900 Sobic003G185900 Sobic004G356400--Sobic003G185900 Sobic004G356400--Sobic007G105500 Sobic001G303200 Sobic001G303200 Sobic004G356400--Sobic001G303200 Sobic004G356400--Sobic009G237100 Sobic004G189800 Sobic004G189800 Sobic004G356400--Sobic004G189800 Sobic001G258200 Sobic001G258200 Sobic004G356400--Sobic001G258200 Sobic001G134100--Sobic003G367500 Sobic001G134100--Sobic001G329400 Sobic005G231500 Sobic005G231500 Sobic001G134100--Sobic005G231500 Sobic001G134100--Sobic007G105500 Sobic001G134100--Sobic004G154200 Sobic010G085100 Sobic010G085100 Sobic001G134100--Sobic010G085100 Sobic008G117000 Sobic008G117000 Sobic001G134100--Sobic008G117000 Sobic001G134100--Sobic010G039500 Sobic001G134100--Sobic004G215800 Sobic007G105500--Sobic004G215800 Sobic003G036200 Sobic003G036200 Sobic007G105500--Sobic003G036200 Sobic002G404800 Sobic002G404800 Sobic007G105500--Sobic002G404800 Sobic007G105500--Sobic003G185900 Sobic007G105500--Sobic003G367500 Sobic007G105500--Sobic005G101200 Sobic009G256100 Sobic009G256100 Sobic007G105500--Sobic009G256100 Sobic008G033000 Sobic008G033000 Sobic007G105500--Sobic008G033000 Sobic007G105500--Sobic010G085100
Octagon: transcription factors


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