Gene annotation
Transcriptome id Sobic.001G176600.1
Synonym CYP71B2, Sb01g015360
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
cytochrome P450, putative, expressed
UniProt A0A1Z5S680
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF173
NCBI CDD KOG0156; Cytochrome P450 CYP2 subfamily
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT1G13110 : cytochrome P450, family 71 subfamily B, polypeptide 7
RAP-DB (Rice) LOC_Os03g39650.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a007165 , Zm00025a007180
Brachypodium -
Barley HORVU5Hr1G013880.4 , HORVU5Hr1G013880.3 , HORVU5Hr1G104210.1 , HORVU5Hr1G104210.2 , HORVU5Hr1G104210.4 , HORVU5Hr1G013990.3 , HORVU5Hr1G013990.2 , HORVU5Hr1G013990.4 , HORVU5Hr1G013880.5 , HORVU5Hr1G013880.2 , HORVU5Hr1G013880.1
Wheat TraesCS5D02G067700 , TraesCS5B02G060200 , TraesCS5A02G056600 , TraesCS5D02G437300 , TraesCS5B02G060300 , TraesCS6B02G118800 , TraesCS5A02G056500 , TraesCS5A02G429200 , TraesCS5D02G067800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G338100 THYLAKOID FORMATION1, chloroplast precursor, putative, expressed -
2 Sobic.001G474500 mitochondrial carrier protein, putative, expressed -
3 Sobic.001G130000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
4 Sobic.010G205500 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
5 Sobic.008G017800 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase
6 Sobic.009G034700 aspartic proteinase oryzasin-1 precursor, putative, expressed K08245: phytepsin
7 Sobic.007G068100 aconitate hydratase protein, putative, expressed K01681: ACO, aconitate hydratase
8 Sobic.001G359500 cytochrome P450, putative, expressed -
9 Sobic.001G069900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
10 Sobic.003G388251 - K01166: ribonuclease T2
11 Sobic.001G325200 Expressed in drought and oxidative stress(PubMedID : 29862293)@aldehyde oxidase, putative, expressed K00106: xanthine dehydrogenase/oxidase
12 Sobic.001G150600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K13606: NOL, chlorophyll(ide) b reductase
13 Sobic.003G010600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K13606: NOL, chlorophyll(ide) b reductase
14 Sobic.009G057300 acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
15 Sobic.002G315800 Papain family cysteine protease domain containing protein, expressed K01363: cathepsin B
16 Sobic.009G207600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dnaJ domain containing protein, expressed -
17 Sobic.003G087200 nuclease PA3, putative, expressed -
18 Sobic.006G100332 - -
19 Sobic.009G226600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@wax synthase, putative, expressed -
20 Sobic.001G351800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@integral membrane protein, putative, expressed -


Gene co-expression network
sample Sobic001G176600 Sobic001G176600 Sobic002G338100 Sobic002G338100 Sobic001G176600--Sobic002G338100 Sobic001G474500 Sobic001G474500 Sobic001G176600--Sobic001G474500 Sobic001G130000 Sobic001G130000 Sobic001G176600--Sobic001G130000 Sobic010G205500 Sobic010G205500 Sobic001G176600--Sobic010G205500 Sobic008G017800 Sobic008G017800 Sobic001G176600--Sobic008G017800 Sobic009G034700 Sobic009G034700 Sobic001G176600--Sobic009G034700 Sobic007G068100 Sobic007G068100 Sobic001G176600--Sobic007G068100 Sobic001G359500 Sobic001G359500 Sobic001G176600--Sobic001G359500 Sobic001G069900 Sobic001G069900 Sobic001G176600--Sobic001G069900 Sobic009G207600 Sobic009G207600 Sobic002G338100--Sobic009G207600 Sobic001G504900 Sobic001G504900 Sobic002G338100--Sobic001G504900 Sobic003G398100 Sobic003G398100 Sobic002G338100--Sobic003G398100 Sobic002G338100--Sobic001G176600 Sobic008G153400 Sobic008G153400 Sobic002G338100--Sobic008G153400 Sobic002G338100--Sobic001G474500 Sobic006G091700 Sobic006G091700 Sobic002G338100--Sobic006G091700 Sobic002G338100--Sobic009G034700 Sobic006G181300 Sobic006G181300 Sobic002G338100--Sobic006G181300 Sobic001G474500--Sobic007G068100 Sobic001G325200 Sobic001G325200 Sobic001G474500--Sobic001G325200 Sobic009G057300 Sobic009G057300 Sobic001G474500--Sobic009G057300 Sobic004G060900 Sobic004G060900 Sobic001G474500--Sobic004G060900 Sobic003G388251 Sobic003G388251 Sobic001G474500--Sobic003G388251 Sobic004G321800 Sobic004G321800 Sobic001G474500--Sobic004G321800 Sobic003G428400 Sobic003G428400 Sobic001G474500--Sobic003G428400 Sobic001G474500--Sobic001G130000 Sobic001G474500--Sobic009G034700 Sobic001G130000--Sobic001G474500 Sobic001G130000--Sobic009G034700 Sobic001G130000--Sobic007G068100 Sobic001G130000--Sobic003G388251 Sobic001G130000--Sobic001G325200 Sobic001G130000--Sobic001G069900 Sobic008G079300 Sobic008G079300 Sobic001G130000--Sobic008G079300 Sobic001G130000--Sobic008G017800 Sobic004G345800 Sobic004G345800 Sobic001G130000--Sobic004G345800 Sobic010G205500--Sobic001G474500 Sobic010G205500--Sobic007G068100 Sobic004G266400 Sobic004G266400 Sobic010G205500--Sobic004G266400 Sobic010G205500--Sobic003G388251 Sobic010G205500--Sobic001G176600 Sobic001G111150 Sobic001G111150 Sobic010G205500--Sobic001G111150 Sobic003G100800 Sobic003G100800 Sobic010G205500--Sobic003G100800 Sobic010G251200 Sobic010G251200 Sobic010G205500--Sobic010G251200 Sobic010G205500--Sobic009G034700 Sobic008G017800--Sobic007G068100 Sobic008G017800--Sobic001G325200 Sobic003G329400 Sobic003G329400 Sobic008G017800--Sobic003G329400 Sobic003G148800 Sobic003G148800 Sobic008G017800--Sobic003G148800 Sobic008G017800--Sobic001G474500 Sobic009G211400 Sobic009G211400 Sobic008G017800--Sobic009G211400 Sobic003G366400 Sobic003G366400 Sobic008G017800--Sobic003G366400 Sobic007G219900 Sobic007G219900 Sobic008G017800--Sobic007G219900 Sobic008G017800--Sobic009G057300 Sobic005G178100 Sobic005G178100 Sobic009G034700--Sobic005G178100 Sobic009G034700--Sobic003G388251 Sobic004G124200 Sobic004G124200 Sobic009G034700--Sobic004G124200 Sobic009G034700--Sobic001G474500 Sobic009G034700--Sobic001G069900 Sobic006G028900 Sobic006G028900 Sobic009G034700--Sobic006G028900 Sobic009G034700--Sobic008G079300 Sobic009G034700--Sobic001G325200 Sobic001G015500 Sobic001G015500 Sobic009G034700--Sobic001G015500 Sobic007G068100--Sobic001G325200 Sobic007G068100--Sobic001G474500 Sobic007G068100--Sobic003G388251 Sobic007G068100--Sobic003G148800 Sobic007G068100--Sobic009G057300 Sobic004G101900 Sobic004G101900 Sobic007G068100--Sobic004G101900 Sobic007G068100--Sobic003G428400 Sobic009G226300 Sobic009G226300 Sobic007G068100--Sobic009G226300 Sobic007G068100--Sobic004G321800 Sobic001G359500--Sobic006G181300 Sobic001G359500--Sobic002G338100 Sobic001G359500--Sobic001G504900 Sobic001G359500--Sobic009G207600 Sobic001G359500--Sobic001G176600 Sobic009G226600 Sobic009G226600 Sobic001G359500--Sobic009G226600 Sobic007G034000 Sobic007G034000 Sobic001G359500--Sobic007G034000 Sobic008G074400 Sobic008G074400 Sobic001G359500--Sobic008G074400 Sobic010G205200 Sobic010G205200 Sobic001G359500--Sobic010G205200 Sobic001G069900--Sobic001G015500 Sobic001G069900--Sobic006G181300 Sobic003G087200 Sobic003G087200 Sobic001G069900--Sobic003G087200 Sobic001G069900--Sobic006G091700 Sobic009G114000 Sobic009G114000 Sobic001G069900--Sobic009G114000 Sobic001G150600 Sobic001G150600 Sobic001G069900--Sobic001G150600 Sobic001G069900--Sobic005G178100 Sobic001G069900--Sobic009G034700 Sobic001G069900--Sobic001G325200
Octagon: transcription factors


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