Gene annotation
Transcriptome id Sobic.010G203200.1,Sobic.010G203200.2
Synonym Sb10g025070
Functional annotation protein kinase domain containing protein, expressed
UniProt A0A194YKF2 , A0A194YKE8
Pfam PF00069
Panther DB PTHR22967 PTHR22967:SF60
NCBI CDD KOG0198; MEKK and related serine/threonine protein kinases
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G32250 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os06g43270.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a051418
Brachypodium KQK16748
Barley HORVU7Hr1G116190.3 , HORVU7Hr1G116190.2 , HORVU7Hr1G116190.1
Wheat TraesCS7D02G512200 , TraesCS7A02G523000 , TraesCS7A02G523000 , TraesCS7B02G440000 , TraesCS7B02G440000
Populus -


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cDNA sequences
Sobic.010G203200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G207400 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
2 Sobic.003G322700 expressed protein -
3 Sobic.001G282600 transporter family protein, putative, expressed -
4 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -
5 Sobic.002G430000 expressed protein K08518: STXBP5, syntaxin-binding protein 5
6 Sobic.004G355000 SAC9, putative, expressed -
7 Sobic.004G124200 3-hydroxyacyl-CoA dehydrogenase, putative, expressed K10527: enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
8 Sobic.010G001500 AML1, putative, expressed -
9 Sobic.007G004500 phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
10 Sobic.001G438600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dihydrodipicolinate reductase, putative, expressed K00215: 4-hydroxy-tetrahydrodipicolinate reductase
11 Sobic.002G249200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin efflux carrier component, putative, expressed -
12 Sobic.001G325200 Expressed in drought and oxidative stress(PubMedID : 29862293)@aldehyde oxidase, putative, expressed K00106: xanthine dehydrogenase/oxidase
13 Sobic.003G010600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K13606: NOL, chlorophyll(ide) b reductase
14 Sobic.002G243800 BPI/LBP family protein At3g20270 precursor, putative, expressed -
15 Sobic.001G301700 MYB family transcription factor, putative, expressed K09522: DnaJ homolog subfamily C member 2
16 Sobic.007G068100 aconitate hydratase protein, putative, expressed K01681: ACO, aconitate hydratase
17 Sobic.006G204900 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
18 Sobic.004G065000 expressed protein -
19 Sobic.004G331100 WD domain and HEAT domain containing protein, putative, expressed K08333: PIK3R4, phosphoinositide-3-kinase, regulatory subunit 4
20 Sobic.007G075400 expressed protein -


Gene co-expression network
sample Sobic010G203200 Sobic010G203200 Sobic001G207400 Sobic001G207400 Sobic010G203200--Sobic001G207400 Sobic003G322700 Sobic003G322700 Sobic010G203200--Sobic003G322700 Sobic001G282600 Sobic001G282600 Sobic010G203200--Sobic001G282600 Sobic002G266000 Sobic002G266000 Sobic010G203200--Sobic002G266000 Sobic002G430000 Sobic002G430000 Sobic010G203200--Sobic002G430000 Sobic004G355000 Sobic004G355000 Sobic010G203200--Sobic004G355000 Sobic004G124200 Sobic004G124200 Sobic010G203200--Sobic004G124200 Sobic010G001500 Sobic010G001500 Sobic010G203200--Sobic010G001500 Sobic007G004500 Sobic007G004500 Sobic010G203200--Sobic007G004500 Sobic001G207400--Sobic004G355000 Sobic001G207400--Sobic002G430000 Sobic002G270500 Sobic002G270500 Sobic001G207400--Sobic002G270500 Sobic006G204900 Sobic006G204900 Sobic001G207400--Sobic006G204900 Sobic005G157000 Sobic005G157000 Sobic001G207400--Sobic005G157000 Sobic010G139600 Sobic010G139600 Sobic001G207400--Sobic010G139600 Sobic002G111000 Sobic002G111000 Sobic001G207400--Sobic002G111000 Sobic001G207400--Sobic003G322700 Sobic001G050200 Sobic001G050200 Sobic001G207400--Sobic001G050200 Sobic003G322700--Sobic002G266000 Sobic003G322700--Sobic006G204900 Sobic003G322700--Sobic010G001500 Sobic003G322700--Sobic004G355000 Sobic003G322700--Sobic001G207400 Sobic003G355600 Sobic003G355600 Sobic003G322700--Sobic003G355600 Sobic006G087700 Sobic006G087700 Sobic003G322700--Sobic006G087700 Sobic006G199000 Sobic006G199000 Sobic003G322700--Sobic006G199000 Sobic004G034600 Sobic004G034600 Sobic003G322700--Sobic004G034600 Sobic001G282600--Sobic002G266000 Sobic006G104600 Sobic006G104600 Sobic001G282600--Sobic006G104600 Sobic001G282600--Sobic006G199000 Sobic004G225200 Sobic004G225200 Sobic001G282600--Sobic004G225200 Sobic007G210500 Sobic007G210500 Sobic001G282600--Sobic007G210500 Sobic004G329300 Sobic004G329300 Sobic001G282600--Sobic004G329300 Sobic008G153400 Sobic008G153400 Sobic001G282600--Sobic008G153400 Sobic001G282600--Sobic003G355600 Sobic001G282600--Sobic003G322700 Sobic002G266000--Sobic003G322700 Sobic002G266000--Sobic001G282600 Sobic002G266000--Sobic006G104600 Sobic002G249200 Sobic002G249200 Sobic002G266000--Sobic002G249200 Sobic004G261900 Sobic004G261900 Sobic002G266000--Sobic004G261900 Sobic002G266000--Sobic007G004500 Sobic002G266000--Sobic004G034600 Sobic005G149700 Sobic005G149700 Sobic002G266000--Sobic005G149700 Sobic002G266000--Sobic004G225200 Sobic002G430000--Sobic001G207400 Sobic001G117200 Sobic001G117200 Sobic002G430000--Sobic001G117200 Sobic002G430000--Sobic004G355000 Sobic008G098900 Sobic008G098900 Sobic002G430000--Sobic008G098900 Sobic001G016700 Sobic001G016700 Sobic002G430000--Sobic001G016700 Sobic004G113400 Sobic004G113400 Sobic002G430000--Sobic004G113400 Sobic002G430000--Sobic010G139600 Sobic008G092600 Sobic008G092600 Sobic002G430000--Sobic008G092600 Sobic003G110000 Sobic003G110000 Sobic002G430000--Sobic003G110000 Sobic004G355000--Sobic001G207400 Sobic004G355000--Sobic002G430000 Sobic001G248300 Sobic001G248300 Sobic004G355000--Sobic001G248300 Sobic005G001000 Sobic005G001000 Sobic004G355000--Sobic005G001000 Sobic004G329400 Sobic004G329400 Sobic004G355000--Sobic004G329400 Sobic004G355000--Sobic005G157000 Sobic004G355000--Sobic003G322700 Sobic004G355000--Sobic004G113400 Sobic009G010600 Sobic009G010600 Sobic004G355000--Sobic009G010600 Sobic003G388251 Sobic003G388251 Sobic004G124200--Sobic003G388251 Sobic004G101900 Sobic004G101900 Sobic004G124200--Sobic004G101900 Sobic001G325200 Sobic001G325200 Sobic004G124200--Sobic001G325200 Sobic001G015500 Sobic001G015500 Sobic004G124200--Sobic001G015500 Sobic009G161000 Sobic009G161000 Sobic004G124200--Sobic009G161000 Sobic010G043400 Sobic010G043400 Sobic004G124200--Sobic010G043400 Sobic004G124200--Sobic006G199000 Sobic007G068100 Sobic007G068100 Sobic004G124200--Sobic007G068100 Sobic005G178100 Sobic005G178100 Sobic004G124200--Sobic005G178100 Sobic010G001500--Sobic003G322700 Sobic007G024700 Sobic007G024700 Sobic010G001500--Sobic007G024700 Sobic010G001500--Sobic004G355000 Sobic010G001500--Sobic006G204900 Sobic010G224000 Sobic010G224000 Sobic010G001500--Sobic010G224000 Sobic002G419800 Sobic002G419800 Sobic010G001500--Sobic002G419800 Sobic010G001500--Sobic001G207400 Sobic001G178700 Sobic001G178700 Sobic010G001500--Sobic001G178700 Sobic001G146800 Sobic001G146800 Sobic010G001500--Sobic001G146800 Sobic007G004500--Sobic002G266000 Sobic007G004500--Sobic002G430000 Sobic001G085300 Sobic001G085300 Sobic007G004500--Sobic001G085300 Sobic001G390800 Sobic001G390800 Sobic007G004500--Sobic001G390800 Sobic007G004500--Sobic001G016700 Sobic007G004500--Sobic003G322700 Sobic007G004500--Sobic010G139600 Sobic004G065000 Sobic004G065000 Sobic007G004500--Sobic004G065000 Sobic009G133500 Sobic009G133500 Sobic007G004500--Sobic009G133500
Octagon: transcription factors


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