Gene annotation
Transcriptome id Sobic.006G240700.5,Sobic.006G240700.6,Sobic.006G240700.4,Sobic.006G240700.3
Synonym Sb06g030670, FL1, AP2, FLO2
Functional annotation AP2 domain containing protein, expressed
UniProt A0A1Z5RGF5 , A0A1Z5RG90 , A0A1Z5RFB8 , A0A1Z5RFH1
Pfam PF00847
Panther DB PTHR32467 PTHR32467:SF18
NCBI CDD -
KEGG Orthology K09284; AP2-like factor, euAP2 lineage
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0007275multicellular organism development


Orthologs (automatic annotation)
TAIR AT4G36920 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os04g55560.3 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a038204 , Zm00025a057203 , Zm00025a009542
Brachypodium PNT71968 , PNT71965 , PNT71964 , PNT71967 , PNT71966 , PNT71963 , KQK07822 , KQK07823 , KQK07820 , KQK07821 , KQJ84987 , KQJ84986 , KQJ84985
Barley HORVU2Hr1G113880.22 , HORVU2Hr1G113880.23 , HORVU2Hr1G113880.20 , HORVU2Hr1G113880.21 , HORVU2Hr1G113880.12 , HORVU2Hr1G113880.11 , HORVU2Hr1G113880.14 , HORVU1Hr1G011800.30 , HORVU2Hr1G113880.9 , HORVU2Hr1G113880.3 , HORVU2Hr1G113880.7 , HORVU2Hr1G113880.4 , HORVU2Hr1G113880.19 , HORVU2Hr1G113880.18 , HORVU1Hr1G011800.26 , HORVU1Hr1G011800.20 , HORVU1Hr1G011800.21 , HORVU1Hr1G011800.22 , HORVU1Hr1G011800.23 , HORVU1Hr1G011800.24 , HORVU1Hr1G011800.25 , HORVU1Hr1G011800.27 , HORVU1Hr1G011800.28 , HORVU1Hr1G011800.29 , HORVU1Hr1G011800.15 , HORVU1Hr1G011800.14 , HORVU1Hr1G011800.13 , HORVU1Hr1G011800.12 , HORVU1Hr1G011800.19 , HORVU1Hr1G011800.18 , HORVU1Hr1G011800.1 , HORVU1Hr1G011800.3 , HORVU1Hr1G011800.2 , HORVU1Hr1G011800.5 , HORVU1Hr1G011800.4 , HORVU1Hr1G011800.7 , HORVU1Hr1G011800.6 , HORVU1Hr1G011800.9 , HORVU1Hr1G011800.8 , HORVU1Hr1G011800.11
Wheat TraesCS2D02G515800 , TraesCS1B02G076300 , TraesCS1B02G076300 , TraesCS1B02G076300 , TraesCS2B02G542400 , TraesCS2B02G542400 , TraesCS2A02G514200 , TraesCS1D02G059200 , TraesCS1D02G059200 , TraesCS1D02G059200 , TraesCS1D02G059200 , TraesCS1A02G058400 , TraesCS1A02G058400 , TraesCS1A02G058400 , TraesCS7B02G440400
Populus -


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cDNA sequences
Sobic.006G240700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G305200 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed K01126: E3.1.4.46, glpQ, glycerophosphoryl diester phosphodiesterase
2 Sobic.001G111150 - K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
3 Sobic.003G200100 DUF630/DUF632 domains containing protein, putative, expressed -
4 Sobic.001G130000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
5 Sobic.007G024700 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
6 Sobic.008G177200 amino acid permease, putative, expressed K13863: SLC7A1, solute carrier family 7 (cationic amino acid transporter), member 1
7 Sobic.003G100800 acetyl-CoA acetyltransferase, cytosolic, putative, expressed K00626: ACAT, acetyl-CoA C-acetyltransferase
8 Sobic.010G001500 AML1, putative, expressed -
9 Sobic.001G474500 mitochondrial carrier protein, putative, expressed -
10 Sobic.003G388251 - K01166: ribonuclease T2
11 Sobic.010G130200 BPI/LBP family protein At3g20270 precursor, putative, expressed K05399: lipopolysaccharide-binding protein
12 Sobic.009G094300 emp24/gp25L/p24 family protein, putative, expressed -
13 Sobic.002G230500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.007G068100 aconitate hydratase protein, putative, expressed K01681: ACO, aconitate hydratase
15 Sobic.001G270400 OsPOP20 - Putative Prolyl Oligopeptidase homologue, expressed -
16 Sobic.008G167800 heat shock protein DnaJ, putative, expressed K09534: DnaJ homolog subfamily C member 14
17 Sobic.006G083600 expressed protein K10134: etoposide-induced 2.4 mRNA
18 Sobic.003G354400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyl-coenzyme A oxidase, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
19 Sobic.006G204900 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
20 Sobic.008G017800 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase


Gene co-expression network
sample Sobic006G240700 Sobic006G240700 Sobic003G305200 Sobic003G305200 Sobic006G240700--Sobic003G305200 Sobic001G111150 Sobic001G111150 Sobic006G240700--Sobic001G111150 Sobic003G200100 Sobic003G200100 Sobic006G240700--Sobic003G200100 Sobic001G130000 Sobic001G130000 Sobic006G240700--Sobic001G130000 Sobic007G024700 Sobic007G024700 Sobic006G240700--Sobic007G024700 Sobic008G177200 Sobic008G177200 Sobic006G240700--Sobic008G177200 Sobic003G100800 Sobic003G100800 Sobic006G240700--Sobic003G100800 Sobic010G001500 Sobic010G001500 Sobic006G240700--Sobic010G001500 Sobic001G474500 Sobic001G474500 Sobic006G240700--Sobic001G474500 Sobic003G305200--Sobic007G024700 Sobic010G130200 Sobic010G130200 Sobic003G305200--Sobic010G130200 Sobic001G427100 Sobic001G427100 Sobic003G305200--Sobic001G427100 Sobic006G083600 Sobic006G083600 Sobic003G305200--Sobic006G083600 Sobic002G132000 Sobic002G132000 Sobic003G305200--Sobic002G132000 Sobic004G295800 Sobic004G295800 Sobic003G305200--Sobic004G295800 Sobic009G094300 Sobic009G094300 Sobic003G305200--Sobic009G094300 Sobic002G270500 Sobic002G270500 Sobic003G305200--Sobic002G270500 Sobic003G329400 Sobic003G329400 Sobic003G305200--Sobic003G329400 Sobic001G111150--Sobic010G130200 Sobic007G068100 Sobic007G068100 Sobic001G111150--Sobic007G068100 Sobic009G057300 Sobic009G057300 Sobic001G111150--Sobic009G057300 Sobic003G354400 Sobic003G354400 Sobic001G111150--Sobic003G354400 Sobic001G111150--Sobic010G001500 Sobic003G388251 Sobic003G388251 Sobic001G111150--Sobic003G388251 Sobic001G111150--Sobic001G474500 Sobic004G127700 Sobic004G127700 Sobic001G111150--Sobic004G127700 Sobic004G124200 Sobic004G124200 Sobic001G111150--Sobic004G124200 Sobic004G065000 Sobic004G065000 Sobic003G200100--Sobic004G065000 Sobic003G200100--Sobic010G001500 Sobic004G265800 Sobic004G265800 Sobic003G200100--Sobic004G265800 Sobic009G133500 Sobic009G133500 Sobic003G200100--Sobic009G133500 Sobic003G200100--Sobic001G111150 Sobic003G200100--Sobic010G130200 Sobic006G204900 Sobic006G204900 Sobic003G200100--Sobic006G204900 Sobic002G415900 Sobic002G415900 Sobic003G200100--Sobic002G415900 Sobic001G436900 Sobic001G436900 Sobic003G200100--Sobic001G436900 Sobic001G130000--Sobic001G474500 Sobic009G034700 Sobic009G034700 Sobic001G130000--Sobic009G034700 Sobic001G130000--Sobic007G068100 Sobic001G130000--Sobic003G388251 Sobic001G325200 Sobic001G325200 Sobic001G130000--Sobic001G325200 Sobic001G069900 Sobic001G069900 Sobic001G130000--Sobic001G069900 Sobic008G079300 Sobic008G079300 Sobic001G130000--Sobic008G079300 Sobic008G017800 Sobic008G017800 Sobic001G130000--Sobic008G017800 Sobic004G345800 Sobic004G345800 Sobic001G130000--Sobic004G345800 Sobic007G024700--Sobic002G270500 Sobic007G024700--Sobic009G094300 Sobic009G249200 Sobic009G249200 Sobic007G024700--Sobic009G249200 Sobic004G052900 Sobic004G052900 Sobic007G024700--Sobic004G052900 Sobic001G270400 Sobic001G270400 Sobic007G024700--Sobic001G270400 Sobic004G264400 Sobic004G264400 Sobic007G024700--Sobic004G264400 Sobic007G024700--Sobic003G305200 Sobic007G024700--Sobic002G132000 Sobic002G419800 Sobic002G419800 Sobic007G024700--Sobic002G419800 Sobic001G233700 Sobic001G233700 Sobic008G177200--Sobic001G233700 Sobic008G177200--Sobic003G100800 Sobic008G177200--Sobic003G305200 Sobic001G261200 Sobic001G261200 Sobic008G177200--Sobic001G261200 Sobic008G177200--Sobic006G240700 Sobic008G177200--Sobic001G130000 Sobic008G177200--Sobic007G024700 Sobic002G230100 Sobic002G230100 Sobic008G177200--Sobic002G230100 Sobic004G244400 Sobic004G244400 Sobic008G177200--Sobic004G244400 Sobic003G100800--Sobic004G052900 Sobic007G172400 Sobic007G172400 Sobic003G100800--Sobic007G172400 Sobic003G109100 Sobic003G109100 Sobic003G100800--Sobic003G109100 Sobic003G100800--Sobic007G024700 Sobic004G329400 Sobic004G329400 Sobic003G100800--Sobic004G329400 Sobic001G248300 Sobic001G248300 Sobic003G100800--Sobic001G248300 Sobic001G178700 Sobic001G178700 Sobic003G100800--Sobic001G178700 Sobic010G251200 Sobic010G251200 Sobic003G100800--Sobic010G251200 Sobic004G113400 Sobic004G113400 Sobic003G100800--Sobic004G113400 Sobic003G322700 Sobic003G322700 Sobic010G001500--Sobic003G322700 Sobic010G001500--Sobic007G024700 Sobic004G355000 Sobic004G355000 Sobic010G001500--Sobic004G355000 Sobic010G001500--Sobic006G204900 Sobic010G224000 Sobic010G224000 Sobic010G001500--Sobic010G224000 Sobic010G001500--Sobic002G419800 Sobic001G207400 Sobic001G207400 Sobic010G001500--Sobic001G207400 Sobic010G001500--Sobic001G178700 Sobic001G146800 Sobic001G146800 Sobic010G001500--Sobic001G146800 Sobic001G474500--Sobic007G068100 Sobic001G474500--Sobic001G325200 Sobic001G474500--Sobic009G057300 Sobic004G060900 Sobic004G060900 Sobic001G474500--Sobic004G060900 Sobic001G474500--Sobic003G388251 Sobic004G321800 Sobic004G321800 Sobic001G474500--Sobic004G321800 Sobic003G428400 Sobic003G428400 Sobic001G474500--Sobic003G428400 Sobic001G474500--Sobic001G130000 Sobic001G474500--Sobic009G034700
Octagon: transcription factors


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