Gene annotation
Transcriptome id Sobic.004G097400.4,Sobic.004G097400.1,Sobic.004G097400.3
Synonym Sb04g008020
Functional annotation mitochondrial carrier protein, putative, expressed
UniProt C5XYH0 , A0A194YNR8
Pfam PF00153
Panther DB PTHR24089:SF245 PTHR24089 PTHR24089 PTHR24089:SF245
NCBI CDD KOG0752; Mitochondrial solute carrier protein
KEGG Orthology K15084; SLC25A16, GDA, solute carrier family 25 (mitochondrial carrier protein), member 16
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G26180 : Mitochondrial substrate carrier family protein
RAP-DB (Rice) LOC_Os02g13300.1 : mitochondrial carrier protein, putative, expressed
MaizeGDB (Corn) Zm00025a020133
Brachypodium PNT66205 , PNT66206 , PNT66207 , KQJ94107
Barley HORVU6Hr1G042080.5 , HORVU6Hr1G042080.2 , HORVU6Hr1G042080.3 , HORVU6Hr1G042080.1 , HORVU6Hr1G042080.8 , HORVU6Hr1G042080.9 , HORVU6Hr1G042080.6 , HORVU6Hr1G042080.7 , HORVU6Hr1G042080.4 , HORVU6Hr1G042080.14 , HORVU6Hr1G042080.15 , HORVU6Hr1G042080.16 , HORVU6Hr1G042080.10 , HORVU6Hr1G042080.11 , HORVU6Hr1G042080.12 , HORVU6Hr1G042080.13
Wheat TraesCS4A02G427000 , TraesCS4A02G428000 , TraesCS4A02G428000 , TraesCS4A02G428000 , TraesCS7D02G056700 , TraesCS7D02G056700 , TraesCS7D02G056700 , TraesCS6B02G231800 , TraesCS6B02G231800 , TraesCS6B02G231800 , TraesCS6B02G231800 , TraesCS7A02G061900 , TraesCS7A02G061900 , TraesCS6D02G176300 , TraesCS6D02G176300 , TraesCS6D02G176300 , TraesCS6D02G176300 , TraesCS6A02G187900 , TraesCS6A02G187900 , TraesCS6A02G187900 , TraesCS6A02G187900
Populus -


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cDNA sequences
Sobic.004G097400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G261600 ubiquitin interaction motif family protein, expressed -
2 Sobic.002G244100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.004G275700 adaptor complexes medium subunit family domain containing protein, expressed K11826: AP-2 complex subunit mu-1
4 Sobic.001G089800 nuclear prelamin A recognition factor, putative, expressed -
5 Sobic.002G132000 serine/threonine-protein kinase AFC2, putative, expressed K08287: dual-specificity kinase
6 Sobic.009G072700 O-acyltransferase, putative, expressed K11155: diacylglycerol O-acyltransferase 1
7 Sobic.001G270400 OsPOP20 - Putative Prolyl Oligopeptidase homologue, expressed -
8 Sobic.003G365300 sorting nexin 1, putative, expressed K17917: sorting nexin-1/2
9 Sobic.010G064600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@LIM domain-containing protein, putative, expressed -
10 Sobic.008G093000 ABC transporter, ATP-binding protein, putative, expressed K06185: ATP-binding cassette, subfamily F, member 2
11 Sobic.007G205900 uvrB/uvrC motif family protein, expressed -
12 Sobic.010G243400 expressed protein -
13 Sobic.002G262900 farnesyltransferase/geranylgeranyltransferase type-1 subunitalpha, putative, expressed K05955: protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
14 Sobic.006G002000 phosphoglycerate mutase, putative, expressed -
15 Sobic.006G082400 expressed protein -
16 Sobic.002G008800 PTEN, putative, expressed K01110: phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN
17 Sobic.010G164000 FYVE zinc finger domain containing protein, expressed -
18 Sobic.010G205800 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
19 Sobic.002G111000 peptidase, putative, expressed -
20 Sobic.004G295800 chaperone protein dnaJ, putative, expressed K09503: DnaJ homolog subfamily A member 2


Gene co-expression network
sample Sobic004G097400 Sobic004G097400 Sobic010G261600 Sobic010G261600 Sobic004G097400--Sobic010G261600 Sobic002G244100 Sobic002G244100 Sobic004G097400--Sobic002G244100 Sobic004G275700 Sobic004G275700 Sobic004G097400--Sobic004G275700 Sobic001G089800 Sobic001G089800 Sobic004G097400--Sobic001G089800 Sobic002G132000 Sobic002G132000 Sobic004G097400--Sobic002G132000 Sobic009G072700 Sobic009G072700 Sobic004G097400--Sobic009G072700 Sobic001G270400 Sobic001G270400 Sobic004G097400--Sobic001G270400 Sobic003G365300 Sobic003G365300 Sobic004G097400--Sobic003G365300 Sobic010G064600 Sobic010G064600 Sobic004G097400--Sobic010G064600 Sobic003G338500 Sobic003G338500 Sobic010G261600--Sobic003G338500 Sobic002G303600 Sobic002G303600 Sobic010G261600--Sobic002G303600 Sobic002G008800 Sobic002G008800 Sobic010G261600--Sobic002G008800 Sobic004G228800 Sobic004G228800 Sobic010G261600--Sobic004G228800 Sobic004G323700 Sobic004G323700 Sobic010G261600--Sobic004G323700 Sobic002G262900 Sobic002G262900 Sobic010G261600--Sobic002G262900 Sobic009G228700 Sobic009G228700 Sobic010G261600--Sobic009G228700 Sobic010G261600--Sobic004G275700 Sobic010G020400 Sobic010G020400 Sobic010G261600--Sobic010G020400 Sobic009G167700 Sobic009G167700 Sobic002G244100--Sobic009G167700 Sobic002G244100--Sobic001G089800 Sobic008G093000 Sobic008G093000 Sobic002G244100--Sobic008G093000 Sobic004G225100 Sobic004G225100 Sobic002G244100--Sobic004G225100 Sobic003G354400 Sobic003G354400 Sobic002G244100--Sobic003G354400 Sobic002G244100--Sobic010G064600 Sobic004G167400 Sobic004G167400 Sobic002G244100--Sobic004G167400 Sobic001G334600 Sobic001G334600 Sobic002G244100--Sobic001G334600 Sobic009G126900 Sobic009G126900 Sobic002G244100--Sobic009G126900 Sobic001G199100 Sobic001G199100 Sobic004G275700--Sobic001G199100 Sobic001G091300 Sobic001G091300 Sobic004G275700--Sobic001G091300 Sobic009G075800 Sobic009G075800 Sobic004G275700--Sobic009G075800 Sobic004G275700--Sobic002G262900 Sobic001G007000 Sobic001G007000 Sobic004G275700--Sobic001G007000 Sobic004G275700--Sobic010G020400 Sobic004G275700--Sobic002G008800 Sobic004G275700--Sobic003G365300 Sobic003G012200 Sobic003G012200 Sobic004G275700--Sobic003G012200 Sobic001G003000 Sobic001G003000 Sobic001G089800--Sobic001G003000 Sobic004G341200 Sobic004G341200 Sobic001G089800--Sobic004G341200 Sobic009G193700 Sobic009G193700 Sobic001G089800--Sobic009G193700 Sobic006G271200 Sobic006G271200 Sobic001G089800--Sobic006G271200 Sobic001G089800--Sobic009G167700 Sobic001G089800--Sobic002G244100 Sobic004G102400 Sobic004G102400 Sobic001G089800--Sobic004G102400 Sobic001G089800--Sobic010G064600 Sobic001G089800--Sobic003G354400 Sobic004G006200 Sobic004G006200 Sobic002G132000--Sobic004G006200 Sobic004G264400 Sobic004G264400 Sobic002G132000--Sobic004G264400 Sobic007G024700 Sobic007G024700 Sobic002G132000--Sobic007G024700 Sobic004G295800 Sobic004G295800 Sobic002G132000--Sobic004G295800 Sobic001G109800 Sobic001G109800 Sobic002G132000--Sobic001G109800 Sobic001G290000 Sobic001G290000 Sobic002G132000--Sobic001G290000 Sobic009G113000 Sobic009G113000 Sobic002G132000--Sobic009G113000 Sobic003G305200 Sobic003G305200 Sobic002G132000--Sobic003G305200 Sobic001G137100 Sobic001G137100 Sobic002G132000--Sobic001G137100 Sobic009G072700--Sobic010G064600 Sobic006G260500 Sobic006G260500 Sobic009G072700--Sobic006G260500 Sobic005G177700 Sobic005G177700 Sobic009G072700--Sobic005G177700 Sobic009G072700--Sobic008G093000 Sobic007G075500 Sobic007G075500 Sobic009G072700--Sobic007G075500 Sobic001G301700 Sobic001G301700 Sobic009G072700--Sobic001G301700 Sobic009G072700--Sobic010G261600 Sobic009G072700--Sobic003G365300 Sobic009G072700--Sobic004G228800 Sobic001G270400--Sobic007G024700 Sobic009G094300 Sobic009G094300 Sobic001G270400--Sobic009G094300 Sobic010G205800 Sobic010G205800 Sobic001G270400--Sobic010G205800 Sobic003G109100 Sobic003G109100 Sobic001G270400--Sobic003G109100 Sobic001G270400--Sobic001G137100 Sobic002G270500 Sobic002G270500 Sobic001G270400--Sobic002G270500 Sobic001G121200 Sobic001G121200 Sobic001G270400--Sobic001G121200 Sobic004G052900 Sobic004G052900 Sobic001G270400--Sobic004G052900 Sobic001G270400--Sobic001G199100 Sobic001G390800 Sobic001G390800 Sobic003G365300--Sobic001G390800 Sobic006G002000 Sobic006G002000 Sobic003G365300--Sobic006G002000 Sobic006G082400 Sobic006G082400 Sobic003G365300--Sobic006G082400 Sobic003G365300--Sobic004G275700 Sobic002G111000 Sobic002G111000 Sobic003G365300--Sobic002G111000 Sobic001G203900 Sobic001G203900 Sobic003G365300--Sobic001G203900 Sobic009G068500 Sobic009G068500 Sobic003G365300--Sobic009G068500 Sobic003G006300 Sobic003G006300 Sobic003G365300--Sobic003G006300 Sobic001G107600 Sobic001G107600 Sobic003G365300--Sobic001G107600 Sobic003G087000 Sobic003G087000 Sobic010G064600--Sobic003G087000 Sobic010G064600--Sobic008G093000 Sobic010G064600--Sobic010G261600 Sobic010G064600--Sobic004G228800 Sobic010G184300 Sobic010G184300 Sobic010G064600--Sobic010G184300 Sobic006G281800 Sobic006G281800 Sobic010G064600--Sobic006G281800 Sobic010G064600--Sobic009G072700 Sobic010G064600--Sobic001G089800 Sobic010G064600--Sobic001G003000
Octagon: transcription factors


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