Gene annotation
Transcriptome id Sobic.003G259800.1
Synonym Sb03g031390
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
expressed protein
UniProt C5XGS8
Pfam PF04654
Panther DB PTHR31168 PTHR31168:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G18215 : Protein of unknown function, DUF599
RAP-DB (Rice) LOC_Os02g19060.1 : expressed protein
MaizeGDB (Corn) Zm00025a028011
Brachypodium KQK09219 , KQK09218
Barley HORVU3Hr1G063320.3 , HORVU3Hr1G063320.2 , HORVU3Hr1G063320.1
Wheat TraesCS3B02G298800 , TraesCS3A02G265400 , TraesCS3D02G265700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G236300 lectin-like receptor kinase, putative, expressed -
2 Sobic.008G190900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thioesterase family protein, putative, expressed -
3 Sobic.002G355200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@BTBN16 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
4 Sobic.006G086100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- K03006: RPB1, DNA-directed RNA polymerase II subunit RPB1
5 Sobic.001G298500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.001G397400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed -
7 Sobic.002G195000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@proline-rich protein 6, putative, expressed -
8 Sobic.003G332000 expressed protein -
9 Sobic.002G020900 GCRP5 - Glycine and cysteine rich family protein precursor, expressed -
10 Sobic.003G167500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed -
11 Sobic.002G107800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@lectin-like receptor kinase, putative, expressed -
12 Sobic.002G172900 OBP32pep, putative, expressed -
13 Sobic.006G119200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
14 Sobic.005G016800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@CRP11 - Cysteine-rich family protein precursor, expressed -
15 Sobic.006G086000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
16 Sobic.005G231900 mitochondrial carrier protein, putative, expressed K15103: UCP2_3, solute carrier family 25 (mitochondrial uncoupling protein), member 8/9
17 Sobic.001G132000 fumarylacetoacetase, putative, expressed K01557: acylpyruvate hydrolase
18 Sobic.009G153000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@actin, putative, expressed K10355: actin, other eukaryote
19 Sobic.003G316300 insulin-degrading enzyme, putative, expressed K01408: IDE, insulysin
20 Sobic.003G289900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ENTH domain containing protein, expressed K12471: epsin


Gene co-expression network
sample Sobic003G259800 Sobic003G259800 Sobic009G236300 Sobic009G236300 Sobic003G259800--Sobic009G236300 Sobic008G190900 Sobic008G190900 Sobic003G259800--Sobic008G190900 Sobic002G355200 Sobic002G355200 Sobic003G259800--Sobic002G355200 Sobic006G086100 Sobic006G086100 Sobic003G259800--Sobic006G086100 Sobic001G298500 Sobic001G298500 Sobic003G259800--Sobic001G298500 Sobic001G397400 Sobic001G397400 Sobic003G259800--Sobic001G397400 Sobic002G195000 Sobic002G195000 Sobic003G259800--Sobic002G195000 Sobic003G332000 Sobic003G332000 Sobic003G259800--Sobic003G332000 Sobic002G020900 Sobic002G020900 Sobic003G259800--Sobic002G020900 Sobic008G144500 Sobic008G144500 Sobic009G236300--Sobic008G144500 Sobic009G236300--Sobic002G355200 Sobic001G235500 Sobic001G235500 Sobic009G236300--Sobic001G235500 Sobic002G107800 Sobic002G107800 Sobic009G236300--Sobic002G107800 Sobic009G236300--Sobic006G086100 Sobic009G118600 Sobic009G118600 Sobic009G236300--Sobic009G118600 Sobic009G038501 Sobic009G038501 Sobic009G236300--Sobic009G038501 Sobic009G236300--Sobic001G298500 Sobic009G142200 Sobic009G142200 Sobic009G236300--Sobic009G142200 Sobic008G189200 Sobic008G189200 Sobic008G190900--Sobic008G189200 Sobic003G105800 Sobic003G105800 Sobic008G190900--Sobic003G105800 Sobic003G252300 Sobic003G252300 Sobic008G190900--Sobic003G252300 Sobic002G274800 Sobic002G274800 Sobic008G190900--Sobic002G274800 Sobic008G190900--Sobic006G086100 Sobic004G162400 Sobic004G162400 Sobic008G190900--Sobic004G162400 Sobic002G172900 Sobic002G172900 Sobic008G190900--Sobic002G172900 Sobic009G126900 Sobic009G126900 Sobic008G190900--Sobic009G126900 Sobic007G225900 Sobic007G225900 Sobic008G190900--Sobic007G225900 Sobic001G151800 Sobic001G151800 Sobic002G355200--Sobic001G151800 Sobic002G355200--Sobic008G144500 Sobic009G236200 Sobic009G236200 Sobic002G355200--Sobic009G236200 Sobic007G125900 Sobic007G125900 Sobic002G355200--Sobic007G125900 Sobic004G236550 Sobic004G236550 Sobic002G355200--Sobic004G236550 Sobic005G016800 Sobic005G016800 Sobic002G355200--Sobic005G016800 Sobic002G355200--Sobic009G236300 Sobic010G016400 Sobic010G016400 Sobic002G355200--Sobic010G016400 Sobic006G119200 Sobic006G119200 Sobic002G355200--Sobic006G119200 Sobic003G000600 Sobic003G000600 Sobic006G086100--Sobic003G000600 Sobic006G086100--Sobic004G236550 Sobic006G086100--Sobic009G118600 Sobic006G086100--Sobic008G144500 Sobic006G086100--Sobic008G190900 Sobic006G086100--Sobic001G235500 Sobic006G115300 Sobic006G115300 Sobic006G086100--Sobic006G115300 Sobic003G281900 Sobic003G281900 Sobic006G086100--Sobic003G281900 Sobic006G086100--Sobic009G236300 Sobic009G000200 Sobic009G000200 Sobic001G298500--Sobic009G000200 Sobic009G079300 Sobic009G079300 Sobic001G298500--Sobic009G079300 Sobic006G271200 Sobic006G271200 Sobic001G298500--Sobic006G271200 Sobic001G350700 Sobic001G350700 Sobic001G298500--Sobic001G350700 Sobic001G298500--Sobic008G189200 Sobic004G004200 Sobic004G004200 Sobic001G298500--Sobic004G004200 Sobic010G107000 Sobic010G107000 Sobic001G298500--Sobic010G107000 Sobic007G092700 Sobic007G092700 Sobic001G298500--Sobic007G092700 Sobic006G125400 Sobic006G125400 Sobic001G298500--Sobic006G125400 Sobic001G408200 Sobic001G408200 Sobic001G397400--Sobic001G408200 Sobic001G397400--Sobic002G172900 Sobic001G156100 Sobic001G156100 Sobic001G397400--Sobic001G156100 Sobic001G023200 Sobic001G023200 Sobic001G397400--Sobic001G023200 Sobic001G427100 Sobic001G427100 Sobic001G397400--Sobic001G427100 Sobic003G009100 Sobic003G009100 Sobic001G397400--Sobic003G009100 Sobic001G397400--Sobic004G162400 Sobic003G005600 Sobic003G005600 Sobic001G397400--Sobic003G005600 Sobic001G474700 Sobic001G474700 Sobic001G397400--Sobic001G474700 Sobic005G231900 Sobic005G231900 Sobic002G195000--Sobic005G231900 Sobic001G395700 Sobic001G395700 Sobic002G195000--Sobic001G395700 Sobic002G195000--Sobic003G105800 Sobic002G195000--Sobic004G162400 Sobic002G304000 Sobic002G304000 Sobic002G195000--Sobic002G304000 Sobic004G101900 Sobic004G101900 Sobic002G195000--Sobic004G101900 Sobic005G216000 Sobic005G216000 Sobic002G195000--Sobic005G216000 Sobic003G184900 Sobic003G184900 Sobic002G195000--Sobic003G184900 Sobic002G195000--Sobic008G190900 Sobic003G332000--Sobic004G236550 Sobic004G353600 Sobic004G353600 Sobic003G332000--Sobic004G353600 Sobic003G374700 Sobic003G374700 Sobic003G332000--Sobic003G374700 Sobic003G332000--Sobic009G118600 Sobic001G005700 Sobic001G005700 Sobic003G332000--Sobic001G005700 Sobic009G136100 Sobic009G136100 Sobic003G332000--Sobic009G136100 Sobic002G225300 Sobic002G225300 Sobic003G332000--Sobic002G225300 Sobic003G332000--Sobic009G079300 Sobic007G131700 Sobic007G131700 Sobic003G332000--Sobic007G131700 Sobic010G236500 Sobic010G236500 Sobic002G020900--Sobic010G236500 Sobic002G292600 Sobic002G292600 Sobic002G020900--Sobic002G292600 Sobic003G414600 Sobic003G414600 Sobic002G020900--Sobic003G414600 Sobic004G145200 Sobic004G145200 Sobic002G020900--Sobic004G145200 Sobic009G241700 Sobic009G241700 Sobic002G020900--Sobic009G241700 Sobic001G012800 Sobic001G012800 Sobic002G020900--Sobic001G012800 Sobic009G213700 Sobic009G213700 Sobic002G020900--Sobic009G213700 Sobic005G195600 Sobic005G195600 Sobic002G020900--Sobic005G195600 Sobic007G225300 Sobic007G225300 Sobic002G020900--Sobic007G225300
Octagon: transcription factors


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