Gene annotation
Transcriptome id Sobic.003G146100.1
Synonym Sb03g012620
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
methyltransferase, putative, expressed
UniProt C5XIQ9
Pfam PF08241
Panther DB PTHR10108 PTHR10108:SF692
NCBI CDD KOG3010; Methyltransferase
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT2G41380 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os01g20206.1 : methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a036069
Brachypodium KQK04109 , KQK04108
Barley HORVU2Hr1G007570.1 , HORVU2Hr1G007570.3 , HORVU2Hr1G007570.2 , HORVU2Hr1G007570.5 , HORVU2Hr1G007570.4
Wheat TraesCS2B02G062500 , TraesCS2A02G048600 , TraesCS2D02G047500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G379866 - -
2 Sobic.010G163000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
3 Sobic.003G019200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
4 Sobic.001G399100 peroxisomal biogenesis factor 11, putative, expressed -
5 Sobic.005G109000 cytochrome P450, putative, expressed -
6 Sobic.002G232800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
7 Sobic.003G341100 WRKY24, expressed K13424: WRKY transcription factor 33
8 Sobic.006G192500 CAMK_CAMK_like.27 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
9 Sobic.002G118600 SNARE domain containing protein, putative, expressed K18211: synaptosomal-associated protein 25
10 Sobic.010G102000 U-box protein CMPG1, putative, expressed -
11 Sobic.010G083600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1645 domain containing protein, putative, expressed -
12 Sobic.009G217500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.18 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
13 Sobic.002G374100 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
14 Sobic.004G182300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MLO domain containing protein, putative, expressed K08472: mlo protein
15 Sobic.001G147200 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6
16 Sobic.010G246000 zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.004G058000 VQ domain containing protein, putative, expressed -
18 Sobic.004G158901 - -
19 Sobic.010G209100 WRKY28, expressed -
20 Sobic.001G386000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@no apical meristem protein, putative, expressed -


Gene co-expression network
sample Sobic003G146100 Sobic003G146100 Sobic002G379866 Sobic002G379866 Sobic003G146100--Sobic002G379866 Sobic010G163000 Sobic010G163000 Sobic003G146100--Sobic010G163000 Sobic003G019200 Sobic003G019200 Sobic003G146100--Sobic003G019200 Sobic001G399100 Sobic001G399100 Sobic003G146100--Sobic001G399100 Sobic005G109000 Sobic005G109000 Sobic003G146100--Sobic005G109000 Sobic002G232800 Sobic002G232800 Sobic003G146100--Sobic002G232800 Sobic003G341100 Sobic003G341100 Sobic003G146100--Sobic003G341100 Sobic006G192500 Sobic006G192500 Sobic003G146100--Sobic006G192500 Sobic002G118600 Sobic002G118600 Sobic003G146100--Sobic002G118600 Sobic002G379866--Sobic003G146100 Sobic001G157200 Sobic001G157200 Sobic002G379866--Sobic001G157200 Sobic002G222800 Sobic002G222800 Sobic002G379866--Sobic002G222800 Sobic001G074200 Sobic001G074200 Sobic002G379866--Sobic001G074200 Sobic002G379866--Sobic002G118600 Sobic006G078400 Sobic006G078400 Sobic002G379866--Sobic006G078400 Sobic004G158901 Sobic004G158901 Sobic002G379866--Sobic004G158901 Sobic001G147200 Sobic001G147200 Sobic002G379866--Sobic001G147200 Sobic002G224100 Sobic002G224100 Sobic002G379866--Sobic002G224100 Sobic010G102150 Sobic010G102150 Sobic010G163000--Sobic010G102150 Sobic005G229700 Sobic005G229700 Sobic010G163000--Sobic005G229700 Sobic001G454100 Sobic001G454100 Sobic010G163000--Sobic001G454100 Sobic010G163000--Sobic003G146100 Sobic010G107100 Sobic010G107100 Sobic010G163000--Sobic010G107100 Sobic010G163000--Sobic001G399100 Sobic010G163000--Sobic005G109000 Sobic001G195100 Sobic001G195100 Sobic010G163000--Sobic001G195100 Sobic010G163000--Sobic004G158901 Sobic010G246000 Sobic010G246000 Sobic003G019200--Sobic010G246000 Sobic003G019200--Sobic001G147200 Sobic009G200700 Sobic009G200700 Sobic003G019200--Sobic009G200700 Sobic003G019200--Sobic001G399100 Sobic007G198100 Sobic007G198100 Sobic003G019200--Sobic007G198100 Sobic002G374100 Sobic002G374100 Sobic003G019200--Sobic002G374100 Sobic003G429300 Sobic003G429300 Sobic003G019200--Sobic003G429300 Sobic010G224200 Sobic010G224200 Sobic003G019200--Sobic010G224200 Sobic008G111100 Sobic008G111100 Sobic003G019200--Sobic008G111100 Sobic009G033700 Sobic009G033700 Sobic001G399100--Sobic009G033700 Sobic009G046600 Sobic009G046600 Sobic001G399100--Sobic009G046600 Sobic001G399100--Sobic010G107100 Sobic004G186500 Sobic004G186500 Sobic001G399100--Sobic004G186500 Sobic001G399100--Sobic003G019200 Sobic001G399100--Sobic009G200700 Sobic005G028700 Sobic005G028700 Sobic001G399100--Sobic005G028700 Sobic001G399100--Sobic005G229700 Sobic010G086200 Sobic010G086200 Sobic001G399100--Sobic010G086200 Sobic010G209100 Sobic010G209100 Sobic005G109000--Sobic010G209100 Sobic002G214800 Sobic002G214800 Sobic005G109000--Sobic002G214800 Sobic002G202100 Sobic002G202100 Sobic005G109000--Sobic002G202100 Sobic007G151100 Sobic007G151100 Sobic005G109000--Sobic007G151100 Sobic002G245800 Sobic002G245800 Sobic005G109000--Sobic002G245800 Sobic010G267600 Sobic010G267600 Sobic005G109000--Sobic010G267600 Sobic001G259600 Sobic001G259600 Sobic005G109000--Sobic001G259600 Sobic010G083600 Sobic010G083600 Sobic005G109000--Sobic010G083600 Sobic001G449700 Sobic001G449700 Sobic005G109000--Sobic001G449700 Sobic010G102000 Sobic010G102000 Sobic002G232800--Sobic010G102000 Sobic002G232800--Sobic003G341100 Sobic009G217500 Sobic009G217500 Sobic002G232800--Sobic009G217500 Sobic001G341600 Sobic001G341600 Sobic002G232800--Sobic001G341600 Sobic007G077100 Sobic007G077100 Sobic002G232800--Sobic007G077100 Sobic010G023200 Sobic010G023200 Sobic002G232800--Sobic010G023200 Sobic010G071000 Sobic010G071000 Sobic002G232800--Sobic010G071000 Sobic002G232800--Sobic010G209100 Sobic007G090300 Sobic007G090300 Sobic002G232800--Sobic007G090300 Sobic003G341100--Sobic009G217500 Sobic007G145700 Sobic007G145700 Sobic003G341100--Sobic007G145700 Sobic009G044400 Sobic009G044400 Sobic003G341100--Sobic009G044400 Sobic003G341100--Sobic007G077100 Sobic003G341100--Sobic010G102000 Sobic003G341100--Sobic001G341600 Sobic006G273800 Sobic006G273800 Sobic003G341100--Sobic006G273800 Sobic003G341100--Sobic010G023200 Sobic003G341100--Sobic002G118600 Sobic006G192500--Sobic001G399100 Sobic005G228000 Sobic005G228000 Sobic006G192500--Sobic005G228000 Sobic006G192500--Sobic002G374100 Sobic010G062800 Sobic010G062800 Sobic006G192500--Sobic010G062800 Sobic001G206400 Sobic001G206400 Sobic006G192500--Sobic001G206400 Sobic010G204300 Sobic010G204300 Sobic006G192500--Sobic010G204300 Sobic006G192500--Sobic001G147200 Sobic006G192500--Sobic002G245800 Sobic006G192500--Sobic010G107100 Sobic002G118600--Sobic001G147200 Sobic002G118600--Sobic001G341600 Sobic002G118600--Sobic003G341100 Sobic010G228000 Sobic010G228000 Sobic002G118600--Sobic010G228000 Sobic002G118600--Sobic002G374100 Sobic001G290400 Sobic001G290400 Sobic002G118600--Sobic001G290400 Sobic007G011000 Sobic007G011000 Sobic002G118600--Sobic007G011000 Sobic001G538866 Sobic001G538866 Sobic002G118600--Sobic001G538866 Sobic006G228300 Sobic006G228300 Sobic002G118600--Sobic006G228300
Octagon: transcription factors


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