Gene annotation
Transcriptome id Sobic.002G135800.1
Synonym Sb02g012300, CLH2, ATCLH2
Functional annotation chlorophyllase-2, chloroplast precursor, putative, expressed
UniProt A0A1B6QB34
Pfam PF12695
Panther DB PTHR33428 PTHR33428:SF2
NCBI CDD -
KEGG Orthology K08099; chlorophyllase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G43860 : chlorophyllase 2
RAP-DB (Rice) LOC_Os10g28370.1 : chlorophyllase-2, chloroplast precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK02324 , KQJ91600
Barley -
Wheat TraesCS6B02G174300 , TraesCS6D02G135300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G300300 Up-reguralion under drought(PubMedID : 24916767)@homeobox associated leucine zipper, putative, expressed -
2 Sobic.008G036000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
3 Sobic.003G146000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@methyltransferase, putative, expressed -
4 Sobic.003G424500 Putative uncharacterized protein(PubMedID : 24906815)@expressed protein -
5 Sobic.002G197600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lg.2 - DUF26 kinases have homology to DUF26 containing loci, expressed -
6 Sobic.009G167000 expressed protein -
7 Sobic.003G158600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@abscisic stress-ripening, putative, expressed -
8 Sobic.008G059000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
9 Sobic.009G076500 expressed protein -
10 Sobic.002G021300 bZIP transcription factor domain containing protein, expressed -
11 Sobic.008G058900 amino acid transporter, putative, expressed -
12 Sobic.003G348700 hydrolase, alpha/beta fold family domain containing protein, expressed -
13 Sobic.006G208100 maintain optimal Na+/K+ (PubmedID : 24325391)@Up-reguralion under drought(PubMedID : 24916767)@OsHKT1@4 - Na+ transporter, expressed -
14 Sobic.004G176900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.9 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
15 Sobic.003G268700 STE_MEKK_ste11_MAP3K.4 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
16 Sobic.003G363200 ZOS1-17 - C2H2 zinc finger protein, expressed -
17 Sobic.004G297200 DUF630/DUF632 domains containing protein, putative, expressed -
18 Sobic.003G431000 spotted leaf 11, putative, expressed -
19 Sobic.010G238400 cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
20 Sobic.004G281200 chitin-inducible gibberellin-responsive protein 2, putative, expressed -


Gene co-expression network
sample Sobic002G135800 Sobic002G135800 Sobic004G300300 Sobic004G300300 Sobic002G135800--Sobic004G300300 Sobic008G036000 Sobic008G036000 Sobic002G135800--Sobic008G036000 Sobic003G146000 Sobic003G146000 Sobic002G135800--Sobic003G146000 Sobic003G424500 Sobic003G424500 Sobic002G135800--Sobic003G424500 Sobic002G197600 Sobic002G197600 Sobic002G135800--Sobic002G197600 Sobic009G167000 Sobic009G167000 Sobic002G135800--Sobic009G167000 Sobic003G158600 Sobic003G158600 Sobic002G135800--Sobic003G158600 Sobic008G059000 Sobic008G059000 Sobic002G135800--Sobic008G059000 Sobic009G076500 Sobic009G076500 Sobic002G135800--Sobic009G076500 Sobic002G021300 Sobic002G021300 Sobic004G300300--Sobic002G021300 Sobic004G300300--Sobic003G424500 Sobic004G300300--Sobic009G167000 Sobic004G300300--Sobic002G135800 Sobic002G188700 Sobic002G188700 Sobic004G300300--Sobic002G188700 Sobic007G101800 Sobic007G101800 Sobic004G300300--Sobic007G101800 Sobic003G087100 Sobic003G087100 Sobic004G300300--Sobic003G087100 Sobic004G300300--Sobic008G059000 Sobic004G300300--Sobic009G076500 Sobic008G036000--Sobic002G197600 Sobic001G209800 Sobic001G209800 Sobic008G036000--Sobic001G209800 Sobic003G268700 Sobic003G268700 Sobic008G036000--Sobic003G268700 Sobic010G076600 Sobic010G076600 Sobic008G036000--Sobic010G076600 Sobic008G036000--Sobic003G158600 Sobic001G462800 Sobic001G462800 Sobic008G036000--Sobic001G462800 Sobic001G077400 Sobic001G077400 Sobic008G036000--Sobic001G077400 Sobic004G084100 Sobic004G084100 Sobic008G036000--Sobic004G084100 Sobic002G036100 Sobic002G036100 Sobic008G036000--Sobic002G036100 Sobic003G146000--Sobic003G424500 Sobic010G238400 Sobic010G238400 Sobic003G146000--Sobic010G238400 Sobic010G247500 Sobic010G247500 Sobic003G146000--Sobic010G247500 Sobic010G105500 Sobic010G105500 Sobic003G146000--Sobic010G105500 Sobic003G348700 Sobic003G348700 Sobic003G146000--Sobic003G348700 Sobic009G068900 Sobic009G068900 Sobic003G146000--Sobic009G068900 Sobic004G176900 Sobic004G176900 Sobic003G146000--Sobic004G176900 Sobic009G212800 Sobic009G212800 Sobic003G146000--Sobic009G212800 Sobic003G146000--Sobic004G300300 Sobic003G424500--Sobic003G146000 Sobic003G424500--Sobic004G300300 Sobic003G424500--Sobic010G247500 Sobic003G424500--Sobic010G105500 Sobic003G424500--Sobic009G167000 Sobic009G030600 Sobic009G030600 Sobic003G424500--Sobic009G030600 Sobic003G424500--Sobic003G087100 Sobic003G424500--Sobic008G059000 Sobic003G424500--Sobic009G076500 Sobic001G081600 Sobic001G081600 Sobic002G197600--Sobic001G081600 Sobic002G217100 Sobic002G217100 Sobic002G197600--Sobic002G217100 Sobic002G197600--Sobic001G462800 Sobic004G281200 Sobic004G281200 Sobic002G197600--Sobic004G281200 Sobic006G210300 Sobic006G210300 Sobic002G197600--Sobic006G210300 Sobic002G367900 Sobic002G367900 Sobic002G197600--Sobic002G367900 Sobic002G197600--Sobic008G036000 Sobic004G244100 Sobic004G244100 Sobic002G197600--Sobic004G244100 Sobic002G197600--Sobic004G176900 Sobic009G167000--Sobic002G021300 Sobic004G244300 Sobic004G244300 Sobic009G167000--Sobic004G244300 Sobic006G194600 Sobic006G194600 Sobic009G167000--Sobic006G194600 Sobic009G167000--Sobic004G244100 Sobic009G167000--Sobic004G281200 Sobic009G167000--Sobic002G217100 Sobic009G167000--Sobic009G076500 Sobic008G058900 Sobic008G058900 Sobic009G167000--Sobic008G058900 Sobic009G167000--Sobic008G059000 Sobic003G158600--Sobic004G084100 Sobic003G158600--Sobic008G036000 Sobic003G158600--Sobic001G462800 Sobic003G158600--Sobic002G197600 Sobic003G158600--Sobic003G268700 Sobic003G158600--Sobic002G021300 Sobic007G077001 Sobic007G077001 Sobic003G158600--Sobic007G077001 Sobic006G095600 Sobic006G095600 Sobic003G158600--Sobic006G095600 Sobic003G158600--Sobic004G300300 Sobic008G059000--Sobic004G281200 Sobic008G059000--Sobic008G058900 Sobic008G059000--Sobic002G021300 Sobic008G059000--Sobic003G087100 Sobic008G059000--Sobic006G194600 Sobic008G059000--Sobic009G167000 Sobic008G059000--Sobic004G244100 Sobic008G059000--Sobic009G076500 Sobic010G016500 Sobic010G016500 Sobic008G059000--Sobic010G016500 Sobic009G076500--Sobic002G021300 Sobic009G076700 Sobic009G076700 Sobic009G076500--Sobic009G076700 Sobic002G037400 Sobic002G037400 Sobic009G076500--Sobic002G037400 Sobic006G026400 Sobic006G026400 Sobic009G076500--Sobic006G026400 Sobic006G203000 Sobic006G203000 Sobic009G076500--Sobic006G203000 Sobic009G076500--Sobic009G167000 Sobic009G076500--Sobic004G244100 Sobic009G076500--Sobic008G059000 Sobic009G076500--Sobic006G194600
Octagon: transcription factors


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