Gene annotation
Transcriptome id Sobic.002G023200.1
Synonym Sb02g002130
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
SCP-like extracellular protein, expressed
UniProt C5X8S0
Pfam PF00188
Panther DB PTHR10334 PTHR10334:SF241
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G19690 : CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
RAP-DB (Rice) LOC_Os07g03730.1 : SCP-like extracellular protein, expressed
MaizeGDB (Corn) Zm00025a044956 , Zm00025a044959 , Zm00025a022392
Brachypodium -
Barley HORVU6Hr1G083310.2 , HORVU6Hr1G083310.1 , HORVU5Hr1G106010.1 , HORVU5Hr1G106010.3 , HORVU5Hr1G106010.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G242000 CSLF7 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
2 Sobic.010G270700 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.007G054900 plant protein of unknown function domain containing protein, expressed -
4 Sobic.003G282100 POEI44 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
5 Sobic.001G449100 E2F-related protein, putative, expressed -
6 Sobic.008G173601 - -
7 Sobic.002G416800 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.010G081100 lipase, putative, expressed -
9 Sobic.002G369400 Sulfotransferase family protein (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
10 Sobic.002G243000 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
11 Sobic.010G009900 - -
12 Sobic.006G217100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Cupin domain containing protein, expressed -
13 Sobic.004G316350 - -
14 Sobic.001G330300 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
15 Sobic.007G215600 OsWAK73 - OsWAK receptor-like protein kinase, expressed -
16 Sobic.003G299300 expressed protein -
17 Sobic.006G240600 - -
18 Sobic.001G180400 OsMADS89 - MADS-box family gene with M-gamma type-box, expressed -
19 Sobic.002G063800 transferase family protein, putative, expressed -
20 Sobic.002G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Os9bglu30 - beta-glucosidase, similar to Os4bglu12 exoglucanase, expressed K01188: beta-glucosidase


Gene co-expression network
sample Sobic002G023200 Sobic002G023200 Sobic001G242000 Sobic001G242000 Sobic002G023200--Sobic001G242000 Sobic010G270700 Sobic010G270700 Sobic002G023200--Sobic010G270700 Sobic007G054900 Sobic007G054900 Sobic002G023200--Sobic007G054900 Sobic003G282100 Sobic003G282100 Sobic002G023200--Sobic003G282100 Sobic001G449100 Sobic001G449100 Sobic002G023200--Sobic001G449100 Sobic008G173601 Sobic008G173601 Sobic002G023200--Sobic008G173601 Sobic002G416800 Sobic002G416800 Sobic002G023200--Sobic002G416800 Sobic010G081100 Sobic010G081100 Sobic002G023200--Sobic010G081100 Sobic002G369400 Sobic002G369400 Sobic002G023200--Sobic002G369400 Sobic001G242000--Sobic007G054900 Sobic001G242000--Sobic002G369400 Sobic002G063800 Sobic002G063800 Sobic001G242000--Sobic002G063800 Sobic001G330300 Sobic001G330300 Sobic001G242000--Sobic001G330300 Sobic001G242000--Sobic010G270700 Sobic010G062300 Sobic010G062300 Sobic001G242000--Sobic010G062300 Sobic006G050800 Sobic006G050800 Sobic001G242000--Sobic006G050800 Sobic010G009900 Sobic010G009900 Sobic001G242000--Sobic010G009900 Sobic001G242000--Sobic001G449100 Sobic010G270700--Sobic003G282100 Sobic008G009400 Sobic008G009400 Sobic010G270700--Sobic008G009400 Sobic010G270700--Sobic001G330300 SobicK026900 SobicK026900 Sobic010G270700--SobicK026900 Sobic004G297900 Sobic004G297900 Sobic010G270700--Sobic004G297900 Sobic003G299300 Sobic003G299300 Sobic010G270700--Sobic003G299300 Sobic008G127933 Sobic008G127933 Sobic010G270700--Sobic008G127933 Sobic003G311800 Sobic003G311800 Sobic010G270700--Sobic003G311800 Sobic009G109000 Sobic009G109000 Sobic010G270700--Sobic009G109000 Sobic007G054900--Sobic010G009900 Sobic007G054900--Sobic001G242000 Sobic008G158600 Sobic008G158600 Sobic007G054900--Sobic008G158600 Sobic004G292600 Sobic004G292600 Sobic007G054900--Sobic004G292600 Sobic002G012300 Sobic002G012300 Sobic007G054900--Sobic002G012300 Sobic005G011900 Sobic005G011900 Sobic007G054900--Sobic005G011900 Sobic007G054900--Sobic002G369400 Sobic001G162233 Sobic001G162233 Sobic007G054900--Sobic001G162233 Sobic008G158501 Sobic008G158501 Sobic007G054900--Sobic008G158501 Sobic003G282100--Sobic010G270700 Sobic003G282100--Sobic001G330300 Sobic003G007600 Sobic003G007600 Sobic003G282100--Sobic003G007600 Sobic003G282100--Sobic008G009400 Sobic003G282100--Sobic003G299300 Sobic006G103000 Sobic006G103000 Sobic003G282100--Sobic006G103000 Sobic002G176100 Sobic002G176100 Sobic003G282100--Sobic002G176100 Sobic003G282100--SobicK026900 Sobic009G111000 Sobic009G111000 Sobic003G282100--Sobic009G111000 Sobic003G079200 Sobic003G079200 Sobic001G449100--Sobic003G079200 Sobic002G243000 Sobic002G243000 Sobic001G449100--Sobic002G243000 Sobic001G449100--Sobic008G158600 Sobic006G240600 Sobic006G240600 Sobic001G449100--Sobic006G240600 Sobic001G449100--Sobic002G369400 Sobic001G449100--Sobic001G242000 Sobic007G215600 Sobic007G215600 Sobic001G449100--Sobic007G215600 Sobic001G449100--Sobic002G063800 Sobic004G161751 Sobic004G161751 Sobic001G449100--Sobic004G161751 Sobic008G173601--Sobic010G270700 Sobic008G173500 Sobic008G173500 Sobic008G173601--Sobic008G173500 Sobic008G173601--Sobic001G242000 Sobic008G177400 Sobic008G177400 Sobic008G173601--Sobic008G177400 Sobic008G173601--Sobic003G282100 Sobic008G173601--Sobic010G081100 Sobic004G316350 Sobic004G316350 Sobic008G173601--Sobic004G316350 Sobic006G243600 Sobic006G243600 Sobic008G173601--Sobic006G243600 Sobic008G173601--Sobic002G023200 Sobic010G110800 Sobic010G110800 Sobic002G416800--Sobic010G110800 Sobic001G462700 Sobic001G462700 Sobic002G416800--Sobic001G462700 Sobic002G416800--Sobic002G023200 Sobic007G204700 Sobic007G204700 Sobic002G416800--Sobic007G204700 Sobic002G416800--Sobic010G270700 Sobic008G172500 Sobic008G172500 Sobic002G416800--Sobic008G172500 Sobic002G247600 Sobic002G247600 Sobic002G416800--Sobic002G247600 Sobic002G416800--Sobic001G242000 Sobic002G416800--Sobic008G173601 Sobic010G081100--Sobic006G103000 Sobic010G081100--Sobic003G299300 Sobic002G351300 Sobic002G351300 Sobic010G081100--Sobic002G351300 Sobic010G081100--Sobic003G007600 Sobic009G205500 Sobic009G205500 Sobic010G081100--Sobic009G205500 Sobic007G058400 Sobic007G058400 Sobic010G081100--Sobic007G058400 Sobic007G017500 Sobic007G017500 Sobic010G081100--Sobic007G017500 Sobic006G198700 Sobic006G198700 Sobic010G081100--Sobic006G198700 Sobic009G183900 Sobic009G183900 Sobic010G081100--Sobic009G183900 Sobic008G027600 Sobic008G027600 Sobic002G369400--Sobic008G027600 Sobic002G369400--Sobic001G242000 Sobic001G114900 Sobic001G114900 Sobic002G369400--Sobic001G114900 Sobic002G369400--Sobic010G062300 Sobic002G369400--Sobic002G012300 Sobic002G369400--Sobic003G079200 Sobic008G022000 Sobic008G022000 Sobic002G369400--Sobic008G022000 Sobic002G369400--Sobic002G063800 Sobic002G369400--Sobic008G158501
Octagon: transcription factors


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