Gene annotation
Transcriptome id Sobic.001G062132.1
Synonym -
Functional annotation -
UniProt A0A1Z5S4K5
Pfam PF02298
Panther DB PTHR33021 PTHR33021:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009055; electron transfer activity


Orthologs (automatic annotation)
TAIR AT5G07475 : Cupredoxin superfamily protein
RAP-DB (Rice) LOC_Os03g57730.1 : uclacyanin-2 precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G044600 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.006G026500 expressed protein -
3 Sobic.006G101300 expressed protein -
4 Sobic.006G234900 expressed protein -
5 Sobic.008G026000 expressed protein -
6 Sobic.006G198000 expressed protein -
7 Sobic.008G036800 alkylresorcinol synthase gene preferentially expressed in root hair (PubMedID : 20348430)@Chalcone and stilbene synthase family("PubMedID : 26759170,PubMedID : 24597475")@chalcone synthase, putative, expressed -
8 Sobic.006G101100 expressed protein -
9 Sobic.001G162233 - -
10 Sobic.006G227750 - -
11 Sobic.008G022000 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
12 Sobic.009G197100 O-methyltransferase, putative, expressed -
13 Sobic.009G197600 O-methyltransferase family 2 protein (At)(PubMedID : 27208977)@O-methyltransferase family protein("PubMedID : 26759170,PubMedID : 24597475")@O-methyltransferase, putative, expressed -
14 Sobic.004G292600 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.002G012300 DUF538 domain containing protein, putative, expressed -
16 Sobic.008G140900 expressed protein -
17 Sobic.008G158501 - -
18 Sobic.008G158600 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.004G165100 Up-regulation in phyB-1 mutant(PubMedID : 26893475)@RCN2 Centroradialis-like1 homologous to TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
20 Sobic.002G010900 expressed protein -


Gene co-expression network
sample Sobic001G062132 Sobic001G062132 Sobic002G044600 Sobic002G044600 Sobic001G062132--Sobic002G044600 Sobic006G026500 Sobic006G026500 Sobic001G062132--Sobic006G026500 Sobic006G101300 Sobic006G101300 Sobic001G062132--Sobic006G101300 Sobic006G234900 Sobic006G234900 Sobic001G062132--Sobic006G234900 Sobic008G026000 Sobic008G026000 Sobic001G062132--Sobic008G026000 Sobic006G198000 Sobic006G198000 Sobic001G062132--Sobic006G198000 Sobic008G036800 Sobic008G036800 Sobic001G062132--Sobic008G036800 Sobic006G101100 Sobic006G101100 Sobic001G062132--Sobic006G101100 Sobic001G162233 Sobic001G162233 Sobic001G062132--Sobic001G162233 Sobic002G044600--Sobic008G036800 Sobic002G044600--Sobic006G026500 Sobic002G044600--Sobic001G062132 Sobic002G012300 Sobic002G012300 Sobic002G044600--Sobic002G012300 Sobic002G044600--Sobic006G234900 Sobic002G044600--Sobic006G101300 Sobic008G158501 Sobic008G158501 Sobic002G044600--Sobic008G158501 Sobic008G158600 Sobic008G158600 Sobic002G044600--Sobic008G158600 Sobic008G022000 Sobic008G022000 Sobic002G044600--Sobic008G022000 Sobic006G026500--Sobic006G234900 Sobic006G026500--Sobic006G101300 Sobic006G026500--Sobic002G044600 Sobic002G422300 Sobic002G422300 Sobic006G026500--Sobic002G422300 Sobic001G188800 Sobic001G188800 Sobic006G026500--Sobic001G188800 Sobic002G010900 Sobic002G010900 Sobic006G026500--Sobic002G010900 Sobic006G026500--Sobic001G062132 Sobic006G026500--Sobic002G012300 Sobic008G140900 Sobic008G140900 Sobic006G026500--Sobic008G140900 Sobic006G101300--Sobic006G234900 Sobic006G101300--Sobic006G101100 Sobic002G042000 Sobic002G042000 Sobic006G101300--Sobic002G042000 Sobic006G101300--Sobic006G026500 Sobic008G066200 Sobic008G066200 Sobic006G101300--Sobic008G066200 Sobic004G169300 Sobic004G169300 Sobic006G101300--Sobic004G169300 Sobic007G008000 Sobic007G008000 Sobic006G101300--Sobic007G008000 Sobic006G101300--Sobic008G022000 Sobic003G418500 Sobic003G418500 Sobic006G101300--Sobic003G418500 Sobic005G108601 Sobic005G108601 Sobic006G234900--Sobic005G108601 Sobic006G234900--Sobic006G101300 Sobic002G115025 Sobic002G115025 Sobic006G234900--Sobic002G115025 Sobic006G234900--Sobic006G026500 Sobic006G234900--Sobic003G418500 Sobic001G256200 Sobic001G256200 Sobic006G234900--Sobic001G256200 Sobic006G234900--Sobic002G042000 Sobic002G093700 Sobic002G093700 Sobic006G234900--Sobic002G093700 Sobic006G227750 Sobic006G227750 Sobic006G234900--Sobic006G227750 Sobic008G026000--Sobic006G198000 Sobic004G292600 Sobic004G292600 Sobic008G026000--Sobic004G292600 Sobic009G197100 Sobic009G197100 Sobic008G026000--Sobic009G197100 Sobic004G165100 Sobic004G165100 Sobic008G026000--Sobic004G165100 Sobic008G184700 Sobic008G184700 Sobic008G026000--Sobic008G184700 Sobic001G539300 Sobic001G539300 Sobic008G026000--Sobic001G539300 Sobic006G198000--Sobic008G026000 Sobic006G198000--Sobic004G292600 Sobic006G198000--Sobic009G197100 Sobic006G198000--Sobic001G162233 Sobic001G246900 Sobic001G246900 Sobic006G198000--Sobic001G246900 Sobic006G198000--Sobic001G539300 Sobic008G036800--Sobic002G012300 Sobic002G012500 Sobic002G012500 Sobic008G036800--Sobic002G012500 Sobic008G036800--Sobic008G022000 Sobic008G036800--Sobic008G158600 Sobic008G036800--Sobic008G158501 Sobic003G426600 Sobic003G426600 Sobic008G036800--Sobic003G426600 Sobic008G036800--Sobic008G066200 Sobic006G008000 Sobic006G008000 Sobic008G036800--Sobic006G008000 Sobic008G036800--Sobic002G044600 Sobic009G192600 Sobic009G192600 Sobic006G101100--Sobic009G192600 Sobic006G101100--Sobic006G101300 Sobic006G101100--Sobic008G066200 Sobic001G259900 Sobic001G259900 Sobic006G101100--Sobic001G259900 Sobic003G313100 Sobic003G313100 Sobic006G101100--Sobic003G313100 Sobic010G082600 Sobic010G082600 Sobic006G101100--Sobic010G082600 Sobic006G101100--Sobic002G012500 Sobic001G259400 Sobic001G259400 Sobic006G101100--Sobic001G259400 Sobic003G142300 Sobic003G142300 Sobic006G101100--Sobic003G142300 Sobic001G162233--Sobic004G292600 Sobic005G011900 Sobic005G011900 Sobic001G162233--Sobic005G011900 Sobic001G162233--Sobic008G158600 Sobic001G162233--Sobic002G012300 Sobic010G156400 Sobic010G156400 Sobic001G162233--Sobic010G156400 Sobic001G162233--Sobic008G158501 Sobic001G162233--Sobic001G539300
Octagon: transcription factors


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