Gene annotation
Transcriptome id Sobic.003G176350.1
Synonym -
Functional annotation -
UniProt A0A1W0VXU8
Pfam PF08137
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G13245 : ROTUNDIFOLIA like 17
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G033900 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
2 Sobic.010G006000 expressed protein -
3 Sobic.003G437200 sulfotransferase domain containing protein, expressed -
4 Sobic.007G066932 - -
5 Sobic.003G426100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
6 Sobic.007G067350 - -
7 Sobic.003G430600 OsCML19 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
8 Sobic.003G062600 limonoid UDP-glucosyltransferase, putative, expressed -
9 Sobic.006G084600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid permease family protein, putative, expressed -
10 Sobic.010G084300 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
11 Sobic.001G365100 lipase, putative, expressed -
12 Sobic.002G195400 "Cinnamyl alcohol dehydrogenase, expressed in lignifying tissues"(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@Protein mannitol dehydrogenase (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
13 Sobic.009G016300 ZOS5-02 - C2H2 zinc finger protein, expressed -
14 Sobic.010G035700 expressed protein -
15 Sobic.010G102100 expressed protein -
16 Sobic.003G301600 heavy metal-associated domain containing protein, expressed -
17 Sobic.007G155100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
18 Sobic.004G107700 expressed protein -
19 Sobic.003G417800 down-regulated TF in developmental senescence(PubMedID : 27586543)@histone-like transcription factor and archaeal histone, putative, expressed -
20 Sobic.008G140300 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -


Gene co-expression network
sample Sobic003G176350 Sobic003G176350 Sobic005G033900 Sobic005G033900 Sobic003G176350--Sobic005G033900 Sobic010G006000 Sobic010G006000 Sobic003G176350--Sobic010G006000 Sobic003G437200 Sobic003G437200 Sobic003G176350--Sobic003G437200 Sobic007G066932 Sobic007G066932 Sobic003G176350--Sobic007G066932 Sobic003G426100 Sobic003G426100 Sobic003G176350--Sobic003G426100 Sobic007G067350 Sobic007G067350 Sobic003G176350--Sobic007G067350 Sobic003G430600 Sobic003G430600 Sobic003G176350--Sobic003G430600 Sobic003G062600 Sobic003G062600 Sobic003G176350--Sobic003G062600 Sobic006G084600 Sobic006G084600 Sobic003G176350--Sobic006G084600 Sobic010G211900 Sobic010G211900 Sobic005G033900--Sobic010G211900 Sobic005G033900--Sobic003G176350 Sobic005G051500 Sobic005G051500 Sobic005G033900--Sobic005G051500 Sobic003G301600 Sobic003G301600 Sobic005G033900--Sobic003G301600 Sobic006G268800 Sobic006G268800 Sobic005G033900--Sobic006G268800 Sobic010G259500 Sobic010G259500 Sobic005G033900--Sobic010G259500 Sobic001G402200 Sobic001G402200 Sobic005G033900--Sobic001G402200 Sobic010G084300 Sobic010G084300 Sobic005G033900--Sobic010G084300 Sobic003G200700 Sobic003G200700 Sobic005G033900--Sobic003G200700 Sobic010G006000--Sobic003G176350 Sobic001G049700 Sobic001G049700 Sobic010G006000--Sobic001G049700 Sobic010G035700 Sobic010G035700 Sobic010G006000--Sobic010G035700 Sobic006G275300 Sobic006G275300 Sobic010G006000--Sobic006G275300 Sobic010G006000--Sobic003G426100 Sobic004G180301 Sobic004G180301 Sobic010G006000--Sobic004G180301 Sobic010G006000--Sobic005G033900 Sobic010G006000--Sobic007G066932 Sobic002G310500 Sobic002G310500 Sobic010G006000--Sobic002G310500 Sobic004G107700 Sobic004G107700 Sobic003G437200--Sobic004G107700 Sobic003G417800 Sobic003G417800 Sobic003G437200--Sobic003G417800 Sobic003G437200--Sobic006G084600 Sobic003G437200--Sobic003G062600 Sobic001G403000 Sobic001G403000 Sobic003G437200--Sobic001G403000 Sobic007G155100 Sobic007G155100 Sobic003G437200--Sobic007G155100 Sobic001G119400 Sobic001G119400 Sobic003G437200--Sobic001G119400 Sobic004G176600 Sobic004G176600 Sobic003G437200--Sobic004G176600 Sobic002G375400 Sobic002G375400 Sobic003G437200--Sobic002G375400 Sobic007G066932--Sobic007G067350 Sobic007G066932--Sobic003G426100 Sobic002G195400 Sobic002G195400 Sobic007G066932--Sobic002G195400 Sobic010G102300 Sobic010G102300 Sobic007G066932--Sobic010G102300 Sobic007G067600 Sobic007G067600 Sobic007G066932--Sobic007G067600 Sobic004G304300 Sobic004G304300 Sobic007G066932--Sobic004G304300 Sobic001G319700 Sobic001G319700 Sobic007G066932--Sobic001G319700 Sobic007G066932--Sobic006G084600 Sobic007G135201 Sobic007G135201 Sobic007G066932--Sobic007G135201 Sobic003G426100--Sobic007G066932 Sobic003G426100--Sobic002G195400 Sobic003G426100--Sobic010G035700 Sobic003G426100--Sobic010G102300 Sobic003G426100--Sobic007G067350 Sobic003G426100--Sobic004G304300 Sobic003G426100--Sobic001G319700 Sobic003G426100--Sobic007G135201 Sobic003G426100--Sobic007G067600 Sobic007G067350--Sobic007G066932 Sobic007G067350--Sobic002G195400 Sobic007G067350--Sobic003G426100 Sobic007G067350--Sobic006G084600 Sobic007G067350--Sobic010G102300 Sobic008G140300 Sobic008G140300 Sobic007G067350--Sobic008G140300 Sobic007G067350--Sobic010G084300 Sobic007G067350--Sobic001G319700 Sobic007G067350--Sobic010G035700 Sobic003G430600--Sobic007G067600 Sobic007G227300 Sobic007G227300 Sobic003G430600--Sobic007G227300 Sobic003G426000 Sobic003G426000 Sobic003G430600--Sobic003G426000 Sobic003G430600--Sobic010G084300 Sobic003G430600--Sobic007G066932 Sobic003G430600--Sobic002G195400 Sobic005G101800 Sobic005G101800 Sobic003G430600--Sobic005G101800 Sobic009G128700 Sobic009G128700 Sobic003G430600--Sobic009G128700 Sobic006G099900 Sobic006G099900 Sobic003G430600--Sobic006G099900 Sobic003G062600--Sobic003G417800 Sobic003G062600--Sobic003G437200 Sobic003G062600--Sobic001G119400 Sobic003G062600--Sobic004G107700 Sobic009G183400 Sobic009G183400 Sobic003G062600--Sobic009G183400 Sobic006G044100 Sobic006G044100 Sobic003G062600--Sobic006G044100 Sobic005G183100 Sobic005G183100 Sobic003G062600--Sobic005G183100 Sobic003G255200 Sobic003G255200 Sobic003G062600--Sobic003G255200 Sobic003G062600--Sobic004G176600 Sobic004G221500 Sobic004G221500 Sobic006G084600--Sobic004G221500 Sobic006G084600--Sobic007G067350 Sobic006G084600--Sobic007G155100 Sobic003G317100 Sobic003G317100 Sobic006G084600--Sobic003G317100 Sobic006G084600--Sobic003G437200 Sobic006G084600--Sobic007G066932 Sobic001G348700 Sobic001G348700 Sobic006G084600--Sobic001G348700 Sobic006G084600--Sobic010G084300 Sobic001G231600 Sobic001G231600 Sobic006G084600--Sobic001G231600
Octagon: transcription factors


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