Gene annotation
Transcriptome id Sobic.010G102100.1
Synonym Sb10g008910
Functional annotation expressed protein
UniProt A0A1W0VSD5
Pfam -
Panther DB PTHR35547 PTHR35547:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g13910.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G195400 "Cinnamyl alcohol dehydrogenase, expressed in lignifying tissues"(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@Protein mannitol dehydrogenase (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
2 Sobic.001G319700 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.001G317000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.009G153100 zinc finger, C3HC4 type domain containing protein, expressed K19040: E3 ubiquitin-protein ligase ATL10/75/76/77/78
5 Sobic.003G426100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
6 Sobic.007G066932 - -
7 Sobic.010G102300 expressed protein -
8 Sobic.005G033900 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
9 Sobic.001G420600 - -
10 Sobic.007G067350 - -
11 Sobic.007G155100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
12 Sobic.003G176350 - -
13 Sobic.007G067600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
14 Sobic.003G426000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.002G203700 hypothetical protein -
16 Sobic.003G156200 cytochrome P450, putative, expressed -
17 Sobic.001G423800 DNA binding protein, putative, expressed -
18 Sobic.004G088551 - -
19 Sobic.006G084600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid permease family protein, putative, expressed -
20 Sobic.003G301600 heavy metal-associated domain containing protein, expressed -


Gene co-expression network
sample Sobic010G102100 Sobic010G102100 Sobic002G195400 Sobic002G195400 Sobic010G102100--Sobic002G195400 Sobic001G319700 Sobic001G319700 Sobic010G102100--Sobic001G319700 Sobic001G317000 Sobic001G317000 Sobic010G102100--Sobic001G317000 Sobic009G153100 Sobic009G153100 Sobic010G102100--Sobic009G153100 Sobic003G426100 Sobic003G426100 Sobic010G102100--Sobic003G426100 Sobic007G066932 Sobic007G066932 Sobic010G102100--Sobic007G066932 Sobic010G102300 Sobic010G102300 Sobic010G102100--Sobic010G102300 Sobic005G033900 Sobic005G033900 Sobic010G102100--Sobic005G033900 Sobic001G420600 Sobic001G420600 Sobic010G102100--Sobic001G420600 Sobic007G067600 Sobic007G067600 Sobic002G195400--Sobic007G067600 Sobic002G195400--Sobic001G319700 Sobic002G195400--Sobic003G426100 Sobic002G195400--Sobic007G066932 Sobic002G195400--Sobic010G102300 Sobic003G426000 Sobic003G426000 Sobic002G195400--Sobic003G426000 Sobic007G067350 Sobic007G067350 Sobic002G195400--Sobic007G067350 Sobic002G195400--Sobic001G317000 Sobic004G304300 Sobic004G304300 Sobic002G195400--Sobic004G304300 Sobic001G319700--Sobic010G102300 Sobic001G319700--Sobic002G195400 Sobic001G319700--Sobic007G067600 Sobic001G319700--Sobic003G426100 Sobic001G319700--Sobic007G066932 Sobic010G035700 Sobic010G035700 Sobic001G319700--Sobic010G035700 Sobic001G319700--Sobic007G067350 Sobic001G319700--Sobic003G426000 Sobic001G319700--Sobic004G304300 Sobic004G088551 Sobic004G088551 Sobic001G317000--Sobic004G088551 Sobic001G423800 Sobic001G423800 Sobic001G317000--Sobic001G423800 Sobic006G275200 Sobic006G275200 Sobic001G317000--Sobic006G275200 Sobic001G119400 Sobic001G119400 Sobic001G317000--Sobic001G119400 Sobic001G317000--Sobic002G195400 Sobic001G097600 Sobic001G097600 Sobic001G317000--Sobic001G097600 Sobic002G261000 Sobic002G261000 Sobic001G317000--Sobic002G261000 Sobic009G183400 Sobic009G183400 Sobic001G317000--Sobic009G183400 Sobic001G038900 Sobic001G038900 Sobic001G317000--Sobic001G038900 Sobic002G415100 Sobic002G415100 Sobic009G153100--Sobic002G415100 Sobic003G156200 Sobic003G156200 Sobic009G153100--Sobic003G156200 Sobic003G280200 Sobic003G280200 Sobic009G153100--Sobic003G280200 Sobic010G239300 Sobic010G239300 Sobic009G153100--Sobic010G239300 Sobic005G029200 Sobic005G029200 Sobic009G153100--Sobic005G029200 Sobic003G297600 Sobic003G297600 Sobic009G153100--Sobic003G297600 Sobic009G128700 Sobic009G128700 Sobic009G153100--Sobic009G128700 Sobic003G417700 Sobic003G417700 Sobic009G153100--Sobic003G417700 Sobic002G034800 Sobic002G034800 Sobic009G153100--Sobic002G034800 Sobic003G426100--Sobic007G066932 Sobic003G426100--Sobic002G195400 Sobic003G426100--Sobic010G035700 Sobic003G426100--Sobic010G102300 Sobic003G426100--Sobic007G067350 Sobic003G426100--Sobic004G304300 Sobic003G426100--Sobic001G319700 Sobic007G135201 Sobic007G135201 Sobic003G426100--Sobic007G135201 Sobic003G426100--Sobic007G067600 Sobic007G066932--Sobic007G067350 Sobic007G066932--Sobic003G426100 Sobic007G066932--Sobic002G195400 Sobic007G066932--Sobic010G102300 Sobic007G066932--Sobic007G067600 Sobic007G066932--Sobic004G304300 Sobic007G066932--Sobic001G319700 Sobic006G084600 Sobic006G084600 Sobic007G066932--Sobic006G084600 Sobic007G066932--Sobic007G135201 Sobic010G102300--Sobic001G319700 Sobic010G102300--Sobic002G195400 Sobic010G102300--Sobic010G035700 Sobic010G102300--Sobic007G066932 Sobic010G102300--Sobic003G426100 Sobic010G102300--Sobic007G067600 Sobic010G102300--Sobic007G067350 Sobic010G102300--Sobic004G304300 Sobic001G231600 Sobic001G231600 Sobic010G102300--Sobic001G231600 Sobic010G211900 Sobic010G211900 Sobic005G033900--Sobic010G211900 Sobic003G176350 Sobic003G176350 Sobic005G033900--Sobic003G176350 Sobic005G051500 Sobic005G051500 Sobic005G033900--Sobic005G051500 Sobic003G301600 Sobic003G301600 Sobic005G033900--Sobic003G301600 Sobic006G268800 Sobic006G268800 Sobic005G033900--Sobic006G268800 Sobic010G259500 Sobic010G259500 Sobic005G033900--Sobic010G259500 Sobic001G402200 Sobic001G402200 Sobic005G033900--Sobic001G402200 Sobic010G084300 Sobic010G084300 Sobic005G033900--Sobic010G084300 Sobic003G200700 Sobic003G200700 Sobic005G033900--Sobic003G200700 Sobic001G420600--Sobic010G102100 Sobic001G037600 Sobic001G037600 Sobic001G420600--Sobic001G037600 Sobic002G348500 Sobic002G348500 Sobic001G420600--Sobic002G348500 Sobic002G230201 Sobic002G230201 Sobic001G420600--Sobic002G230201 Sobic004G156000 Sobic004G156000 Sobic001G420600--Sobic004G156000 Sobic004G105001 Sobic004G105001 Sobic001G420600--Sobic004G105001 Sobic004G280000 Sobic004G280000 Sobic001G420600--Sobic004G280000 Sobic001G420600--Sobic005G033900 Sobic004G241100 Sobic004G241100 Sobic001G420600--Sobic004G241100
Octagon: transcription factors


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