Gene annotation
Transcriptome id Sobic.008G158400.1
Synonym
Functional annotation LTPL113 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt A0A1Z5R737
Pfam PF00234
Panther DB PTHR31731
NCBI CDD -
KEGG Orthology K02883; RP-L18e, large subunit ribosomal protein L18e
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G62510 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os03g01320.1 : LTPL116 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a000125
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G158501 - -
2 Sobic.005G163800 laccase precursor protein, putative, expressed K05909: laccase
3 Sobic.004G180700 expressed protein -
4 Sobic.006G050800 expressed protein -
5 Sobic.008G158800 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
6 Sobic.003G426600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
7 Sobic.002G105300 SCP-like extracellular protein, expressed -
8 Sobic.006G132800 expressed protein -
9 Sobic.001G293000 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.004G301600 integral membrane protein, putative, expressed -
11 Sobic.004G292600 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.010G196000 DNA binding protein, putative, expressed -
13 Sobic.002G012300 DUF538 domain containing protein, putative, expressed -
14 Sobic.008G022000 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
15 Sobic.006G202600 Up-reguralion under heat(PubMedID : 24916767)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
16 Sobic.008G158600 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.010G009900 - -
18 Sobic.002G369400 Sulfotransferase family protein (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
19 Sobic.008G036800 alkylresorcinol synthase gene preferentially expressed in root hair (PubMedID : 20348430)@Chalcone and stilbene synthase family("PubMedID : 26759170,PubMedID : 24597475")@chalcone synthase, putative, expressed -
20 Sobic.002G092400 60S acidic ribosomal protein, putative, expressed K02943: RP-LP2, large subunit ribosomal protein LP2


Gene co-expression network
sample Sobic008G158400 Sobic008G158400 Sobic008G158501 Sobic008G158501 Sobic008G158400--Sobic008G158501 Sobic005G163800 Sobic005G163800 Sobic008G158400--Sobic005G163800 Sobic004G180700 Sobic004G180700 Sobic008G158400--Sobic004G180700 Sobic006G050800 Sobic006G050800 Sobic008G158400--Sobic006G050800 Sobic008G158800 Sobic008G158800 Sobic008G158400--Sobic008G158800 Sobic003G426600 Sobic003G426600 Sobic008G158400--Sobic003G426600 Sobic002G105300 Sobic002G105300 Sobic008G158400--Sobic002G105300 Sobic006G132800 Sobic006G132800 Sobic008G158400--Sobic006G132800 Sobic001G293000 Sobic001G293000 Sobic008G158400--Sobic001G293000 Sobic002G012300 Sobic002G012300 Sobic008G158501--Sobic002G012300 Sobic008G158600 Sobic008G158600 Sobic008G158501--Sobic008G158600 Sobic008G022000 Sobic008G022000 Sobic008G158501--Sobic008G022000 Sobic003G079200 Sobic003G079200 Sobic008G158501--Sobic003G079200 Sobic002G012500 Sobic002G012500 Sobic008G158501--Sobic002G012500 Sobic006G008000 Sobic006G008000 Sobic008G158501--Sobic006G008000 Sobic002G063800 Sobic002G063800 Sobic008G158501--Sobic002G063800 Sobic008G066200 Sobic008G066200 Sobic008G158501--Sobic008G066200 Sobic008G036800 Sobic008G036800 Sobic008G158501--Sobic008G036800 Sobic002G412600 Sobic002G412600 Sobic005G163800--Sobic002G412600 Sobic005G163800--Sobic004G180700 Sobic005G163800--Sobic001G293000 Sobic002G090900 Sobic002G090900 Sobic005G163800--Sobic002G090900 Sobic006G202600 Sobic006G202600 Sobic005G163800--Sobic006G202600 Sobic004G301600 Sobic004G301600 Sobic005G163800--Sobic004G301600 Sobic006G170600 Sobic006G170600 Sobic005G163800--Sobic006G170600 Sobic010G146300 Sobic010G146300 Sobic005G163800--Sobic010G146300 Sobic002G122400 Sobic002G122400 Sobic005G163800--Sobic002G122400 Sobic004G180700--Sobic004G301600 Sobic004G180700--Sobic002G105300 Sobic004G180700--Sobic006G202600 Sobic004G180700--Sobic006G050800 Sobic004G180700--Sobic006G170600 Sobic010G196000 Sobic010G196000 Sobic004G180700--Sobic010G196000 Sobic004G295100 Sobic004G295100 Sobic004G180700--Sobic004G295100 Sobic002G301900 Sobic002G301900 Sobic004G180700--Sobic002G301900 Sobic004G180700--Sobic005G163800 Sobic006G050800--Sobic004G180700 Sobic006G050800--Sobic010G196000 Sobic001G330300 Sobic001G330300 Sobic006G050800--Sobic001G330300 Sobic006G050800--Sobic006G202600 Sobic006G050800--Sobic004G295100 Sobic006G050800--Sobic004G301600 Sobic006G050800--Sobic002G301900 Sobic003G136200 Sobic003G136200 Sobic006G050800--Sobic003G136200 Sobic010G009900 Sobic010G009900 Sobic006G050800--Sobic010G009900 Sobic009G200566 Sobic009G200566 Sobic008G158800--Sobic009G200566 Sobic008G158800--Sobic008G066200 Sobic004G109900 Sobic004G109900 Sobic008G158800--Sobic004G109900 Sobic008G158800--Sobic008G022000 Sobic008G158800--Sobic006G008000 Sobic008G158800--Sobic003G426600 Sobic004G169300 Sobic004G169300 Sobic008G158800--Sobic004G169300 Sobic009G145700 Sobic009G145700 Sobic008G158800--Sobic009G145700 Sobic003G418500 Sobic003G418500 Sobic008G158800--Sobic003G418500 Sobic003G426600--Sobic006G008000 Sobic003G426600--Sobic002G012500 Sobic003G426600--Sobic008G022000 Sobic003G426600--Sobic002G012300 Sobic010G082600 Sobic010G082600 Sobic003G426600--Sobic010G082600 Sobic009G171500 Sobic009G171500 Sobic003G426600--Sobic009G171500 Sobic003G426600--Sobic010G196000 Sobic003G426600--Sobic008G066200 Sobic004G141100 Sobic004G141100 Sobic003G426600--Sobic004G141100 Sobic002G105300--Sobic004G180700 Sobic002G105300--Sobic006G202600 Sobic002G105300--Sobic010G196000 Sobic002G105300--Sobic004G301600 Sobic002G105300--Sobic004G295100 Sobic007G090469 Sobic007G090469 Sobic002G105300--Sobic007G090469 Sobic002G213600 Sobic002G213600 Sobic002G105300--Sobic002G213600 Sobic005G215400 Sobic005G215400 Sobic002G105300--Sobic005G215400 Sobic004G348800 Sobic004G348800 Sobic002G105300--Sobic004G348800 Sobic006G132800--Sobic003G426600 Sobic006G132800--Sobic010G196000 Sobic006G132800--Sobic001G330300 Sobic006G132800--Sobic006G008000 Sobic006G132800--Sobic006G050800 Sobic006G132800--Sobic002G012500 Sobic006G132800--Sobic010G082600 Sobic004G245700 Sobic004G245700 Sobic006G132800--Sobic004G245700 Sobic006G132800--Sobic004G295100 Sobic001G293000--Sobic002G412600 Sobic001G293000--Sobic010G146300 Sobic010G006200 Sobic010G006200 Sobic001G293000--Sobic010G006200 Sobic001G293000--Sobic002G122400 Sobic001G293000--Sobic005G163800 Sobic004G106000 Sobic004G106000 Sobic001G293000--Sobic004G106000 Sobic001G293000--Sobic006G170600 Sobic001G293000--Sobic006G202600 Sobic002G329200 Sobic002G329200 Sobic001G293000--Sobic002G329200
Octagon: transcription factors


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