Gene annotation
| Transcriptome id | Sobic.005G161600.1,Sobic.005G161600.2 |
|---|---|
| Synonym | ATKS1, KS, GA2, KS1, Sb05g022320, ATKS |
| Functional annotation | terpene synthase, putative, expressed |
| UniProt | A0A1Z5RIW9 , A0A1B6PSX1 |
| Pfam | PF01397 PF03936 |
| Panther DB | PTHR31739 PTHR31739:SF8 |
| NCBI CDD | - |
| KEGG Orthology | K04121; ent-kaurene synthase |
| Gene Ontology | GO:0016829; lyase activity GO:0010333terpene synthase activity GO:0008152metabolic process GO:0000287magnesium ion binding |
Orthologs (automatic annotation)
| TAIR | AT1G79460 : Terpenoid cyclases/Protein prenyltransferases superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os04g52230.1,LOC_Os11g28530.3 : terpene synthase, putative, expressed,ent-kaurene synthase, chloroplast precursor, putative, expressed |
| MaizeGDB (Corn) | - |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.004G228850 | - | - |
| 2 | Sobic.005G161200 | ent-kaurene synthase, chloroplast precursor, putative, expressed | K04120: ent-copalyl diphosphate synthase K14043: syn-copalyl-diphosphate synthase |
| 3 | Sobic.001G076850 | - | - |
| 4 | Sobic.001G076850 | - | - |
| 5 | Sobic.001G076850 | - | - |
| 6 | Sobic.001G076850 | - | - |
| 7 | Sobic.001G076850 | - | - |
| 8 | Sobic.001G076850 | - | - |
| 9 | Sobic.001G076850 | - | - |
| 10 | Sobic.001G076850 | - | - |
| 11 | Sobic.001G076850 | - | - |
| 12 | Sobic.002G392200 | peroxidase precursor, putative, expressed | - |
| 13 | Sobic.002G392300 | peroxidase precursor, putative, expressed | K00430: peroxidase |
| 14 | Sobic.003G425900 | OsFBDUF64 - F-box and DUF domain containing protein | - |
| 15 | Sobic.010G174100 | expressed protein | - |
| 16 | Sobic.004G323000 | SCP-like extracellular protein, expressed | - |
| 17 | Sobic.006G171300 | expansin precursor, putative, expressed | - |
| 18 | Sobic.006G135500 | glyoxal oxidase-related, putative, expressed | - |
| 19 | Sobic.004G254900 | aspartic proteinase nepenthesin-2 precursor, putative, expressed | - |
| 20 | Sobic.001G338900 | cytochrome P450, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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