Gene annotation
| Transcriptome id | Sobic.004G254900.1 |
|---|---|
| Synonym | Sb04g029390 |
| Functional annotation | aspartic proteinase nepenthesin-2 precursor, putative, expressed |
| UniProt | C5XZR2 |
| Pfam | PF14541 |
| Panther DB | PTHR13683 PTHR13683:SF290 |
| NCBI CDD | KOG1339; Aspartyl protease |
| KEGG Orthology | - |
| Gene Ontology | GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity |
Orthologs (automatic annotation)
| TAIR | AT5G10770 : Eukaryotic aspartyl protease family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os02g48870.1 : aspartic proteinase nepenthesin-2 precursor, putative, expressed |
| MaizeGDB (Corn) | Zm00025a032596 , Zm00025a032595 |
| Brachypodium | PNT69511 , KQK01062 |
| Barley | HORVU7Hr1G109730.3 , HORVU7Hr1G109730.2 , HORVU7Hr1G109730.1 , HORVU7Hr1G109750.1 , HORVU7Hr1G109750.3 , HORVU7Hr1G109750.2 , HORVU7Hr1G109750.5 , HORVU7Hr1G109750.4 , HORVU7Hr1G109750.7 , HORVU7Hr1G109750.6 , HORVU6Hr1G071190.4 , HORVU6Hr1G071190.5 , HORVU6Hr1G071190.2 , HORVU6Hr1G071190.3 , HORVU6Hr1G071190.1 |
| Wheat | TraesCS7D02G475600 , TraesCS6A02G283500 , TraesCS7A02G489300 , TraesCS7A02G489300 , TraesCS7A02G489200 , TraesCSU02G254900 , TraesCS7B02G392400 , TraesCS6B02G312200 , TraesCS6D02G264000 , TraesCS6D02G264000 , TraesCS7A02G489400 , TraesCS7A02G489400 , TraesCS7B02G392500 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G076850 | - | - |
| 2 | Sobic.001G076850 | - | - |
| 3 | Sobic.001G076850 | - | - |
| 4 | Sobic.001G076850 | - | - |
| 5 | Sobic.001G076850 | - | - |
| 6 | Sobic.001G076850 | - | - |
| 7 | Sobic.001G076850 | - | - |
| 8 | Sobic.001G076850 | - | - |
| 9 | Sobic.001G076850 | - | - |
| 10 | Sobic.004G013700 | aspartic proteinase nepenthesin-2 precursor, putative, expressed | - |
| 11 | Sobic.004G228850 | - | - |
| 12 | Sobic.005G161600 | terpene synthase, putative, expressed | K04121: ent-kaurene synthase |
| 13 | Sobic.002G392200 | peroxidase precursor, putative, expressed | - |
| 14 | Sobic.005G161200 | ent-kaurene synthase, chloroplast precursor, putative, expressed | K04120: ent-copalyl diphosphate synthase K14043: syn-copalyl-diphosphate synthase |
| 15 | Sobic.002G392300 | peroxidase precursor, putative, expressed | K00430: peroxidase |
| 16 | Sobic.003G425701 | - | K00799: GST, glutathione S-transferase |
| 17 | Sobic.010G174100 | expressed protein | - |
| 18 | Sobic.003G425900 | OsFBDUF64 - F-box and DUF domain containing protein | - |
| 19 | Sobic.004G323000 | SCP-like extracellular protein, expressed | - |
| 20 | Sobic.006G171300 | expansin precursor, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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