Gene annotation
Transcriptome id Sobic.002G335400.1
Synonym Sb02g036090
Functional annotation OsFBX250 - F-box domain containing protein, expressed
UniProt C5XAY9
Pfam -
Panther DB PTHR33207 PTHR33207:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g36830.1 : OsFBX250 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a048348
Brachypodium KQJ92898 , KQK16916 , KQJ92887 , KQJ92891
Barley HORVU6Hr1G018740.8 , HORVU6Hr1G018740.9 , HORVU6Hr1G018740.6 , HORVU6Hr1G018740.7 , HORVU6Hr1G018740.4 , HORVU6Hr1G018740.5 , HORVU6Hr1G018740.2 , HORVU6Hr1G018740.3 , HORVU6Hr1G018740.1 , HORVU7Hr1G114830.2 , HORVU7Hr1G114830.1 , HORVU6Hr1G018740.10 , HORVU6Hr1G018740.11
Wheat TraesCS6B02G132200 , TraesCS7B02G427600 , TraesCS2B02G584300 , TraesCS7B02G484700 , TraesCS7A02G559100 , TraesCS7D02G502100 , TraesCS7B02G416700 , TraesCS6B02G132200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G077100 expressed protein -
2 Sobic.003G277000 expressed protein -
3 Sobic.009G131100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
4 Sobic.009G050000 Ser/Thr protein phosphatase family protein, putative, expressed K06269: serine/threonine-protein phosphatase PP1 catalytic subunit
5 Sobic.004G179700 expressed protein -
6 Sobic.004G337000 inositol-1-monophosphatase, putative, expressed K01082: cysQ, MET22, 3'(2'), 5'-bisphosphate nucleotidase
7 Sobic.001G526100 uncharacterized Cys-rich domain containing protein, putative, expressed -
8 Sobic.004G106700 WD domain, G-beta repeat domain containing protein, expressed K13341: PEX7, peroxin-7
9 Sobic.004G157800 LITAF-domain-containing protein, putative, expressed K19363: lipopolysaccharide-induced tumor necrosis factor-alpha factor
10 Sobic.002G368400 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17795: mitochondrial import inner membrane translocase subunit TIM17
11 Sobic.003G102600 K-dependent Na/Ca exchanger(PubMedID : 22196357)@sodium/calcium exchanger protein, putative, expressed K13754: SLC24A6, solute carrier family 24 (sodium/potassium/calcium exchanger), member 6
12 Sobic.010G194900 bZIP transcription factor domain containing protein, expressed -
13 Sobic.003G305100 expressed protein -
14 Sobic.004G011433 - -
15 Sobic.009G024500 50S ribosomal protein L10, chloroplast precursor, putative, expressed K02864: RP-L10, MRPL10, large subunit ribosomal protein L10
16 Sobic.001G463100 zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.001G533300 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
18 Sobic.003G369500 NPL4, putative, expressed K14015: NPLOC4, nuclear protein localization protein 4 homolog
19 Sobic.001G285000 - -
20 Sobic.001G364600 transmembrane protein 85, putative, expressed -


Gene co-expression network
sample Sobic002G335400 Sobic002G335400 Sobic009G077100 Sobic009G077100 Sobic002G335400--Sobic009G077100 Sobic003G277000 Sobic003G277000 Sobic002G335400--Sobic003G277000 Sobic009G131100 Sobic009G131100 Sobic002G335400--Sobic009G131100 Sobic009G050000 Sobic009G050000 Sobic002G335400--Sobic009G050000 Sobic004G179700 Sobic004G179700 Sobic002G335400--Sobic004G179700 Sobic004G337000 Sobic004G337000 Sobic002G335400--Sobic004G337000 Sobic001G526100 Sobic001G526100 Sobic002G335400--Sobic001G526100 Sobic004G106700 Sobic004G106700 Sobic002G335400--Sobic004G106700 Sobic004G157800 Sobic004G157800 Sobic002G335400--Sobic004G157800 Sobic001G031800 Sobic001G031800 Sobic009G077100--Sobic001G031800 Sobic009G024500 Sobic009G024500 Sobic009G077100--Sobic009G024500 Sobic009G077100--Sobic009G050000 Sobic007G141100 Sobic007G141100 Sobic009G077100--Sobic007G141100 Sobic001G148700 Sobic001G148700 Sobic009G077100--Sobic001G148700 Sobic002G246800 Sobic002G246800 Sobic009G077100--Sobic002G246800 Sobic001G067601 Sobic001G067601 Sobic009G077100--Sobic001G067601 Sobic003G305100 Sobic003G305100 Sobic009G077100--Sobic003G305100 Sobic001G100400 Sobic001G100400 Sobic009G077100--Sobic001G100400 Sobic003G277000--Sobic003G305100 Sobic007G091000 Sobic007G091000 Sobic003G277000--Sobic007G091000 Sobic002G078400 Sobic002G078400 Sobic003G277000--Sobic002G078400 Sobic001G538600 Sobic001G538600 Sobic003G277000--Sobic001G538600 Sobic003G277000--Sobic009G131100 Sobic001G533300 Sobic001G533300 Sobic003G277000--Sobic001G533300 Sobic002G222900 Sobic002G222900 Sobic003G277000--Sobic002G222900 Sobic001G286300 Sobic001G286300 Sobic003G277000--Sobic001G286300 Sobic009G168000 Sobic009G168000 Sobic003G277000--Sobic009G168000 Sobic001G536500 Sobic001G536500 Sobic009G131100--Sobic001G536500 Sobic009G131100--Sobic002G078400 Sobic004G060600 Sobic004G060600 Sobic009G131100--Sobic004G060600 Sobic009G131100--Sobic007G091000 Sobic010G194900 Sobic010G194900 Sobic009G131100--Sobic010G194900 Sobic009G131100--Sobic003G277000 Sobic001G087900 Sobic001G087900 Sobic009G131100--Sobic001G087900 Sobic004G265700 Sobic004G265700 Sobic009G131100--Sobic004G265700 Sobic006G281200 Sobic006G281200 Sobic009G131100--Sobic006G281200 Sobic009G050000--Sobic009G077100 Sobic010G039000 Sobic010G039000 Sobic009G050000--Sobic010G039000 Sobic003G116600 Sobic003G116600 Sobic009G050000--Sobic003G116600 Sobic004G159000 Sobic004G159000 Sobic009G050000--Sobic004G159000 Sobic003G167000 Sobic003G167000 Sobic009G050000--Sobic003G167000 Sobic002G368400 Sobic002G368400 Sobic009G050000--Sobic002G368400 Sobic005G019100 Sobic005G019100 Sobic009G050000--Sobic005G019100 Sobic010G178800 Sobic010G178800 Sobic009G050000--Sobic010G178800 Sobic009G050000--Sobic007G141100 Sobic004G179700--Sobic009G131100 Sobic007G079700 Sobic007G079700 Sobic004G179700--Sobic007G079700 Sobic001G206000 Sobic001G206000 Sobic004G179700--Sobic001G206000 Sobic001G285000 Sobic001G285000 Sobic004G179700--Sobic001G285000 Sobic006G262900 Sobic006G262900 Sobic004G179700--Sobic006G262900 Sobic001G225600 Sobic001G225600 Sobic004G179700--Sobic001G225600 Sobic009G199700 Sobic009G199700 Sobic004G179700--Sobic009G199700 Sobic004G179700--Sobic002G335400 Sobic004G179700--Sobic003G277000 Sobic001G463100 Sobic001G463100 Sobic004G337000--Sobic001G463100 Sobic006G263900 Sobic006G263900 Sobic004G337000--Sobic006G263900 Sobic001G138300 Sobic001G138300 Sobic004G337000--Sobic001G138300 Sobic001G054200 Sobic001G054200 Sobic004G337000--Sobic001G054200 Sobic004G293700 Sobic004G293700 Sobic004G337000--Sobic004G293700 Sobic008G001800 Sobic008G001800 Sobic004G337000--Sobic008G001800 Sobic003G000800 Sobic003G000800 Sobic004G337000--Sobic003G000800 Sobic003G050600 Sobic003G050600 Sobic004G337000--Sobic003G050600 Sobic006G160600 Sobic006G160600 Sobic004G337000--Sobic006G160600 Sobic001G309500 Sobic001G309500 Sobic001G526100--Sobic001G309500 Sobic001G526100--Sobic002G078400 Sobic001G526100--Sobic004G157800 Sobic001G064800 Sobic001G064800 Sobic001G526100--Sobic001G064800 Sobic010G065400 Sobic010G065400 Sobic001G526100--Sobic010G065400 Sobic004G196300 Sobic004G196300 Sobic001G526100--Sobic004G196300 Sobic003G381000 Sobic003G381000 Sobic001G526100--Sobic003G381000 Sobic003G217100 Sobic003G217100 Sobic001G526100--Sobic003G217100 Sobic001G526100--Sobic002G368400 Sobic001G110300 Sobic001G110300 Sobic004G106700--Sobic001G110300 Sobic004G106700--Sobic003G305100 Sobic001G060300 Sobic001G060300 Sobic004G106700--Sobic001G060300 Sobic001G451901 Sobic001G451901 Sobic004G106700--Sobic001G451901 Sobic006G231500 Sobic006G231500 Sobic004G106700--Sobic006G231500 Sobic010G194200 Sobic010G194200 Sobic004G106700--Sobic010G194200 Sobic001G129400 Sobic001G129400 Sobic004G106700--Sobic001G129400 Sobic004G244000 Sobic004G244000 Sobic004G106700--Sobic004G244000 Sobic004G106700--Sobic009G024500 Sobic004G157800--Sobic001G064800 Sobic004G157800--Sobic002G078400 Sobic006G182100 Sobic006G182100 Sobic004G157800--Sobic006G182100 Sobic009G249000 Sobic009G249000 Sobic004G157800--Sobic009G249000 Sobic009G094450 Sobic009G094450 Sobic004G157800--Sobic009G094450 Sobic004G157800--Sobic001G526100 Sobic005G092800 Sobic005G092800 Sobic004G157800--Sobic005G092800 Sobic001G445800 Sobic001G445800 Sobic004G157800--Sobic001G445800 Sobic001G403700 Sobic001G403700 Sobic004G157800--Sobic001G403700
Octagon: transcription factors


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