Gene annotation
Transcriptome id Sobic.004G337000.2
Synonym Sb04g036470, HL, AHL, ATAHL
Functional annotation inositol-1-monophosphatase, putative, expressed
UniProt A0A1Z5RQ83
Pfam PF00459
Panther DB PTHR20854 PTHR20854:SF32
NCBI CDD KOG1528; Salt-sensitive 3'-phosphoadenosine-5'-phosphatase HAL2/SAL1
KEGG Orthology K01082; cysQ, MET22, 3'(2'), 5'-bisphosphate nucleotidase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G54390 : HAL2-like
RAP-DB (Rice) LOC_Os02g56170.1 : inositol-1-monophosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a032879
Brachypodium PNT69396 , KQK01243
Barley HORVU6Hr1G087990.5 , HORVU6Hr1G087990.4 , HORVU6Hr1G087990.3 , HORVU6Hr1G087990.2 , HORVU6Hr1G087990.1
Wheat TraesCS6A02G373800 , TraesCS6D02G358000 , TraesCS6B02G411500
Populus PNT13111 , PNT13178 , PNT13179 , PNT13176 , PNT13180


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G463100 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.006G263900 ubiquinone biosynthesis protein COQ4, putative, expressed K18586: ubiquinone biosynthesis protein COQ4
3 Sobic.001G138300 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
4 Sobic.001G054200 green ripe-like, putative, expressed -
5 Sobic.004G293700 peroxisomal biogenesis factor 19, putative, expressed K13337: peroxin-19
6 Sobic.008G001800 SAG20, putative, expressed -
7 Sobic.003G000800 RWP-RK domain-containing protein, putative, expressed -
8 Sobic.003G050600 expressed protein -
9 Sobic.006G160600 histidine triad family protein, putative, expressed -
10 Sobic.002G368400 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17795: mitochondrial import inner membrane translocase subunit TIM17
11 Sobic.001G395400 ubiquitin-conjugating enzyme, putative, expressed K10578: UBE2J1, NCUBE1, ubiquitin-conjugating enzyme E2 J1
12 Sobic.001G526100 uncharacterized Cys-rich domain containing protein, putative, expressed -
13 Sobic.010G199100 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.001G136900 ubiquitin-conjugating enzyme E2 W, putative, expressed K10688: UBE2W, ubiquitin-conjugating enzyme E2 W
15 Sobic.006G262900 expressed protein -
16 Sobic.003G396000 copine, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG
17 Sobic.009G246950 - K12898: heterogeneous nuclear ribonucleoprotein F/H
18 Sobic.002G335400 OsFBX250 - F-box domain containing protein, expressed -
19 Sobic.002G273900 expressed protein -
20 Sobic.010G083700 formin-binding protein-related, putative, expressed K13220: WBP4, WW domain-binding protein 4


Gene co-expression network
sample Sobic004G337000 Sobic004G337000 Sobic001G463100 Sobic001G463100 Sobic004G337000--Sobic001G463100 Sobic006G263900 Sobic006G263900 Sobic004G337000--Sobic006G263900 Sobic001G138300 Sobic001G138300 Sobic004G337000--Sobic001G138300 Sobic001G054200 Sobic001G054200 Sobic004G337000--Sobic001G054200 Sobic004G293700 Sobic004G293700 Sobic004G337000--Sobic004G293700 Sobic008G001800 Sobic008G001800 Sobic004G337000--Sobic008G001800 Sobic003G000800 Sobic003G000800 Sobic004G337000--Sobic003G000800 Sobic003G050600 Sobic003G050600 Sobic004G337000--Sobic003G050600 Sobic006G160600 Sobic006G160600 Sobic004G337000--Sobic006G160600 Sobic001G463100--Sobic004G337000 Sobic001G463100--Sobic006G160600 Sobic010G135000 Sobic010G135000 Sobic001G463100--Sobic010G135000 Sobic001G463100--Sobic001G054200 Sobic004G083300 Sobic004G083300 Sobic001G463100--Sobic004G083300 Sobic010G199100 Sobic010G199100 Sobic001G463100--Sobic010G199100 Sobic001G463100--Sobic001G138300 Sobic004G265700 Sobic004G265700 Sobic001G463100--Sobic004G265700 Sobic009G131100 Sobic009G131100 Sobic001G463100--Sobic009G131100 Sobic010G083700 Sobic010G083700 Sobic006G263900--Sobic010G083700 Sobic006G263900--Sobic001G054200 Sobic010G168600 Sobic010G168600 Sobic006G263900--Sobic010G168600 Sobic001G395400 Sobic001G395400 Sobic006G263900--Sobic001G395400 Sobic001G078500 Sobic001G078500 Sobic006G263900--Sobic001G078500 Sobic006G212100 Sobic006G212100 Sobic006G263900--Sobic006G212100 Sobic010G253800 Sobic010G253800 Sobic006G263900--Sobic010G253800 Sobic009G246950 Sobic009G246950 Sobic006G263900--Sobic009G246950 Sobic003G007500 Sobic003G007500 Sobic006G263900--Sobic003G007500 Sobic004G079100 Sobic004G079100 Sobic001G138300--Sobic004G079100 Sobic003G350600 Sobic003G350600 Sobic001G138300--Sobic003G350600 Sobic001G430800 Sobic001G430800 Sobic001G138300--Sobic001G430800 Sobic004G231400 Sobic004G231400 Sobic001G138300--Sobic004G231400 Sobic001G138300--Sobic001G054200 Sobic001G138300--Sobic006G212100 Sobic001G441600 Sobic001G441600 Sobic001G138300--Sobic001G441600 Sobic001G138300--Sobic006G263900 Sobic002G129000 Sobic002G129000 Sobic001G138300--Sobic002G129000 Sobic001G054200--Sobic010G083700 Sobic001G054200--Sobic006G263900 Sobic001G054200--Sobic006G212100 Sobic007G186300 Sobic007G186300 Sobic001G054200--Sobic007G186300 Sobic001G054200--Sobic004G293700 Sobic001G054200--Sobic009G246950 Sobic001G054200--Sobic004G079100 Sobic006G232200 Sobic006G232200 Sobic001G054200--Sobic006G232200 Sobic003G115800 Sobic003G115800 Sobic001G054200--Sobic003G115800 Sobic004G293700--Sobic010G253800 Sobic004G293700--Sobic004G079100 Sobic004G293700--Sobic010G083700 Sobic004G293700--Sobic001G054200 Sobic004G248800 Sobic004G248800 Sobic004G293700--Sobic004G248800 Sobic009G171700 Sobic009G171700 Sobic004G293700--Sobic009G171700 Sobic002G264400 Sobic002G264400 Sobic004G293700--Sobic002G264400 Sobic006G141500 Sobic006G141500 Sobic004G293700--Sobic006G141500 Sobic003G220600 Sobic003G220600 Sobic004G293700--Sobic003G220600 Sobic002G352700 Sobic002G352700 Sobic008G001800--Sobic002G352700 Sobic008G001800--Sobic006G263900 Sobic008G001800--Sobic004G337000 Sobic001G403700 Sobic001G403700 Sobic008G001800--Sobic001G403700 Sobic008G001800--Sobic003G007500 Sobic001G459500 Sobic001G459500 Sobic008G001800--Sobic001G459500 Sobic008G001800--Sobic010G253800 Sobic008G001800--Sobic001G078500 Sobic010G000900 Sobic010G000900 Sobic008G001800--Sobic010G000900 Sobic003G000800--Sobic009G246950 Sobic001G031200 Sobic001G031200 Sobic003G000800--Sobic001G031200 Sobic003G000800--Sobic001G078500 Sobic004G253000 Sobic004G253000 Sobic003G000800--Sobic004G253000 Sobic001G512600 Sobic001G512600 Sobic003G000800--Sobic001G512600 Sobic001G371300 Sobic001G371300 Sobic003G000800--Sobic001G371300 Sobic003G000800--Sobic010G083700 Sobic001G149700 Sobic001G149700 Sobic003G000800--Sobic001G149700 Sobic003G000800--Sobic007G186300 Sobic003G050600--Sobic004G253000 Sobic002G256300 Sobic002G256300 Sobic003G050600--Sobic002G256300 Sobic002G273900 Sobic002G273900 Sobic003G050600--Sobic002G273900 Sobic003G050600--Sobic010G083700 Sobic004G001400 Sobic004G001400 Sobic003G050600--Sobic004G001400 Sobic001G364600 Sobic001G364600 Sobic003G050600--Sobic001G364600 Sobic001G098200 Sobic001G098200 Sobic003G050600--Sobic001G098200 Sobic003G015900 Sobic003G015900 Sobic003G050600--Sobic003G015900 Sobic004G059000 Sobic004G059000 Sobic003G050600--Sobic004G059000 Sobic007G026100 Sobic007G026100 Sobic006G160600--Sobic007G026100 Sobic003G273100 Sobic003G273100 Sobic006G160600--Sobic003G273100 Sobic001G427800 Sobic001G427800 Sobic006G160600--Sobic001G427800 Sobic006G160600--Sobic004G293700 Sobic006G160600--Sobic001G054200 Sobic003G116700 Sobic003G116700 Sobic006G160600--Sobic003G116700 Sobic006G160600--Sobic001G441600 Sobic009G249000 Sobic009G249000 Sobic006G160600--Sobic009G249000 Sobic006G160600--Sobic001G463100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.