Gene annotation
Transcriptome id Sobic.008G001800.3
Synonym Sb08g000340
Functional annotation SAG20, putative, expressed
UniProt A0A1Z5R442
Pfam PF04749 PF11204
Panther DB PTHR31045 PTHR31045:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G10980 : PLAC8 family protein
RAP-DB (Rice) LOC_Os05g39730.1 : SAG20, putative, expressed
MaizeGDB (Corn) Zm00025a033249
Brachypodium -
Barley HORVU6Hr1G024570.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G352700 expressed protein K08505: protein transport protein SFT1
2 Sobic.006G263900 ubiquinone biosynthesis protein COQ4, putative, expressed K18586: ubiquinone biosynthesis protein COQ4
3 Sobic.004G337000 inositol-1-monophosphatase, putative, expressed K01082: cysQ, MET22, 3'(2'), 5'-bisphosphate nucleotidase
4 Sobic.001G403700 mitochondrial carrier protein, putative, expressed K15113: SLC25A28_37, solute carrier family 25 (mitochondrial iron transporter), member 28/37
5 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -
6 Sobic.001G459500 leucine rich repeat containing protein, expressed -
7 Sobic.010G253800 expressed protein -
8 Sobic.001G078500 expressed protein -
9 Sobic.010G000900 spotted leaf 11, putative, expressed -
10 Sobic.009G146100 RNA recognition motif containing protein, putative, expressed K12831: SF3B4, splicing factor 3B subunit 4
11 Sobic.002G296300 expressed protein -
12 Sobic.003G396000 copine, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG
13 Sobic.003G333400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.004G293700 peroxisomal biogenesis factor 19, putative, expressed K13337: peroxin-19
15 Sobic.001G158500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@LSD1 zinc finger domain containing protein, expressed -
16 Sobic.002G180600 expressed protein K17968: TRIAP1, TRIAP1/MDM35 family protein
17 Sobic.010G188100 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
18 Sobic.003G398300 mitochondrial import inner membrane translocase subunit Tim16, putative, expressed K17805: PAM16, mitochondrial import inner membrane translocase subunit TIM16
19 Sobic.009G111600 expressed protein -
20 Sobic.002G294200 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4


Gene co-expression network
sample Sobic008G001800 Sobic008G001800 Sobic002G352700 Sobic002G352700 Sobic008G001800--Sobic002G352700 Sobic006G263900 Sobic006G263900 Sobic008G001800--Sobic006G263900 Sobic004G337000 Sobic004G337000 Sobic008G001800--Sobic004G337000 Sobic001G403700 Sobic001G403700 Sobic008G001800--Sobic001G403700 Sobic003G007500 Sobic003G007500 Sobic008G001800--Sobic003G007500 Sobic001G459500 Sobic001G459500 Sobic008G001800--Sobic001G459500 Sobic010G253800 Sobic010G253800 Sobic008G001800--Sobic010G253800 Sobic001G078500 Sobic001G078500 Sobic008G001800--Sobic001G078500 Sobic010G000900 Sobic010G000900 Sobic008G001800--Sobic010G000900 Sobic010G168600 Sobic010G168600 Sobic002G352700--Sobic010G168600 Sobic002G352700--Sobic010G253800 Sobic001G057800 Sobic001G057800 Sobic002G352700--Sobic001G057800 Sobic002G256300 Sobic002G256300 Sobic002G352700--Sobic002G256300 Sobic002G352700--Sobic003G007500 Sobic004G203100 Sobic004G203100 Sobic002G352700--Sobic004G203100 Sobic010G083700 Sobic010G083700 Sobic002G352700--Sobic010G083700 Sobic009G246950 Sobic009G246950 Sobic002G352700--Sobic009G246950 Sobic008G180900 Sobic008G180900 Sobic002G352700--Sobic008G180900 Sobic006G263900--Sobic010G083700 Sobic001G054200 Sobic001G054200 Sobic006G263900--Sobic001G054200 Sobic006G263900--Sobic010G168600 Sobic001G395400 Sobic001G395400 Sobic006G263900--Sobic001G395400 Sobic006G263900--Sobic001G078500 Sobic006G212100 Sobic006G212100 Sobic006G263900--Sobic006G212100 Sobic006G263900--Sobic010G253800 Sobic006G263900--Sobic009G246950 Sobic006G263900--Sobic003G007500 Sobic001G463100 Sobic001G463100 Sobic004G337000--Sobic001G463100 Sobic004G337000--Sobic006G263900 Sobic001G138300 Sobic001G138300 Sobic004G337000--Sobic001G138300 Sobic004G337000--Sobic001G054200 Sobic004G293700 Sobic004G293700 Sobic004G337000--Sobic004G293700 Sobic004G337000--Sobic008G001800 Sobic003G000800 Sobic003G000800 Sobic004G337000--Sobic003G000800 Sobic003G050600 Sobic003G050600 Sobic004G337000--Sobic003G050600 Sobic006G160600 Sobic006G160600 Sobic004G337000--Sobic006G160600 Sobic009G111600 Sobic009G111600 Sobic001G403700--Sobic009G111600 Sobic004G284500 Sobic004G284500 Sobic001G403700--Sobic004G284500 Sobic002G078400 Sobic002G078400 Sobic001G403700--Sobic002G078400 Sobic006G182100 Sobic006G182100 Sobic001G403700--Sobic006G182100 Sobic002G296300 Sobic002G296300 Sobic001G403700--Sobic002G296300 Sobic003G248600 Sobic003G248600 Sobic001G403700--Sobic003G248600 Sobic008G132800 Sobic008G132800 Sobic001G403700--Sobic008G132800 Sobic002G214900 Sobic002G214900 Sobic001G403700--Sobic002G214900 Sobic010G213400 Sobic010G213400 Sobic001G403700--Sobic010G213400 Sobic007G186300 Sobic007G186300 Sobic003G007500--Sobic007G186300 Sobic003G007500--Sobic010G083700 Sobic003G007500--Sobic010G168600 Sobic003G007500--Sobic001G078500 Sobic003G295400 Sobic003G295400 Sobic003G007500--Sobic003G295400 Sobic001G051200 Sobic001G051200 Sobic003G007500--Sobic001G051200 Sobic004G072800 Sobic004G072800 Sobic003G007500--Sobic004G072800 Sobic004G104900 Sobic004G104900 Sobic003G007500--Sobic004G104900 Sobic002G281300 Sobic002G281300 Sobic003G007500--Sobic002G281300 Sobic003G323600 Sobic003G323600 Sobic001G459500--Sobic003G323600 Sobic007G045600 Sobic007G045600 Sobic001G459500--Sobic007G045600 Sobic010G188200 Sobic010G188200 Sobic001G459500--Sobic010G188200 Sobic007G142500 Sobic007G142500 Sobic001G459500--Sobic007G142500 Sobic003G398300 Sobic003G398300 Sobic001G459500--Sobic003G398300 Sobic006G232200 Sobic006G232200 Sobic001G459500--Sobic006G232200 Sobic003G367451 Sobic003G367451 Sobic001G459500--Sobic003G367451 Sobic001G461900 Sobic001G461900 Sobic001G459500--Sobic001G461900 Sobic004G335000 Sobic004G335000 Sobic001G459500--Sobic004G335000 Sobic009G146100 Sobic009G146100 Sobic010G253800--Sobic009G146100 Sobic010G253800--Sobic004G293700 Sobic010G253800--Sobic010G083700 Sobic002G247500 Sobic002G247500 Sobic010G253800--Sobic002G247500 Sobic010G253800--Sobic002G352700 Sobic001G007200 Sobic001G007200 Sobic010G253800--Sobic001G007200 Sobic010G253800--Sobic006G263900 Sobic009G171700 Sobic009G171700 Sobic010G253800--Sobic009G171700 Sobic010G253800--Sobic001G054200 Sobic001G078500--Sobic010G168600 Sobic001G078500--Sobic009G171700 Sobic001G078500--Sobic003G007500 Sobic001G078500--Sobic006G263900 Sobic004G339200 Sobic004G339200 Sobic001G078500--Sobic004G339200 Sobic001G078500--Sobic010G083700 Sobic001G078500--Sobic009G246950 Sobic001G078500--Sobic007G186300 Sobic002G400000 Sobic002G400000 Sobic001G078500--Sobic002G400000 Sobic010G000900--Sobic002G400000 Sobic003G012200 Sobic003G012200 Sobic010G000900--Sobic003G012200 Sobic001G047400 Sobic001G047400 Sobic010G000900--Sobic001G047400 Sobic003G261400 Sobic003G261400 Sobic010G000900--Sobic003G261400 Sobic004G130900 Sobic004G130900 Sobic010G000900--Sobic004G130900 Sobic010G000900--Sobic001G051200 Sobic001G323000 Sobic001G323000 Sobic010G000900--Sobic001G323000 Sobic001G388200 Sobic001G388200 Sobic010G000900--Sobic001G388200 Sobic001G085100 Sobic001G085100 Sobic010G000900--Sobic001G085100
Octagon: transcription factors


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