Gene annotation
Transcriptome id Sobic.005G076600.1
Synonym Sb05g006250, emb2170
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5Y748
Pfam -
Panther DB PTHR34193 PTHR34193:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G76980 : -
RAP-DB (Rice) LOC_Os11g09350.1 : expressed protein
MaizeGDB (Corn) Zm00025a029591
Brachypodium KQJ89035
Barley HORVU4Hr1G043990.3
Wheat TraesCS4A02G214000 , TraesCS4D02G099000 , TraesCS4B02G102300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G157200 expressed protein -
2 Sobic.004G179600 VP15, putative, expressed K03635: MOCS2B, molybdopterin synthase catalytic subunit
3 Sobic.006G250500 expressed protein -
4 Sobic.004G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
5 Sobic.005G075900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@C1-like domain containing protein, expressed -
6 Sobic.002G245900 AGC_PVPK_like_CDK8.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
7 Sobic.009G105600 60S ribosomal protein L29-2, putative, expressed K02905: RP-L29e, large subunit ribosomal protein L29e
8 Sobic.004G157000 protein kinase domain containing protein, expressed K13430: serine/threonine-protein kinase PBS1
9 Sobic.007G131800 Annexin D5(PubMedID : 26320239)@annexin, putative, expressed K17095: annexin A7/11
10 Sobic.002G373001 - -
11 Sobic.010G099600 expressed protein -
12 Sobic.002G407100 expressed protein -
13 Sobic.001G080100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.004G010300 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
15 Sobic.004G335600 40S ribosomal protein S30, putative, expressed K02983: RP-S30e, small subunit ribosomal protein S30e
16 Sobic.003G135700 - -
17 Sobic.004G042700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endoglucanase, putative, expressed -
18 Sobic.006G044932 - -
19 Sobic.007G025500 amino acid transporter, putative, expressed -
20 Sobic.010G136000 expressed protein -


Gene co-expression network
sample Sobic005G076600 Sobic005G076600 Sobic006G157200 Sobic006G157200 Sobic005G076600--Sobic006G157200 Sobic004G179600 Sobic004G179600 Sobic005G076600--Sobic004G179600 Sobic006G250500 Sobic006G250500 Sobic005G076600--Sobic006G250500 Sobic004G247600 Sobic004G247600 Sobic005G076600--Sobic004G247600 Sobic005G075900 Sobic005G075900 Sobic005G076600--Sobic005G075900 Sobic002G245900 Sobic002G245900 Sobic005G076600--Sobic002G245900 Sobic009G105600 Sobic009G105600 Sobic005G076600--Sobic009G105600 Sobic004G157000 Sobic004G157000 Sobic005G076600--Sobic004G157000 Sobic007G131800 Sobic007G131800 Sobic005G076600--Sobic007G131800 Sobic004G335600 Sobic004G335600 Sobic006G157200--Sobic004G335600 Sobic006G157200--Sobic005G076600 Sobic006G157200--Sobic004G157000 Sobic004G035200 Sobic004G035200 Sobic006G157200--Sobic004G035200 Sobic002G245800 Sobic002G245800 Sobic006G157200--Sobic002G245800 Sobic006G274700 Sobic006G274700 Sobic006G157200--Sobic006G274700 Sobic006G186700 Sobic006G186700 Sobic006G157200--Sobic006G186700 Sobic010G099600 Sobic010G099600 Sobic006G157200--Sobic010G099600 Sobic002G405600 Sobic002G405600 Sobic006G157200--Sobic002G405600 Sobic007G025500 Sobic007G025500 Sobic004G179600--Sobic007G025500 Sobic007G107000 Sobic007G107000 Sobic004G179600--Sobic007G107000 Sobic002G212200 Sobic002G212200 Sobic004G179600--Sobic002G212200 Sobic002G319100 Sobic002G319100 Sobic004G179600--Sobic002G319100 Sobic009G023200 Sobic009G023200 Sobic004G179600--Sobic009G023200 Sobic003G362100 Sobic003G362100 Sobic004G179600--Sobic003G362100 Sobic005G228000 Sobic005G228000 Sobic004G179600--Sobic005G228000 Sobic001G019900 Sobic001G019900 Sobic004G179600--Sobic001G019900 Sobic001G252300 Sobic001G252300 Sobic004G179600--Sobic001G252300 Sobic009G155200 Sobic009G155200 Sobic006G250500--Sobic009G155200 Sobic006G089300 Sobic006G089300 Sobic006G250500--Sobic006G089300 Sobic007G151100 Sobic007G151100 Sobic006G250500--Sobic007G151100 Sobic006G228300 Sobic006G228300 Sobic006G250500--Sobic006G228300 Sobic007G171000 Sobic007G171000 Sobic006G250500--Sobic007G171000 Sobic006G182100 Sobic006G182100 Sobic006G250500--Sobic006G182100 Sobic010G268400 Sobic010G268400 Sobic006G250500--Sobic010G268400 Sobic001G516600 Sobic001G516600 Sobic006G250500--Sobic001G516600 Sobic006G159300 Sobic006G159300 Sobic006G250500--Sobic006G159300 Sobic002G353900 Sobic002G353900 Sobic004G247600--Sobic002G353900 Sobic006G143400 Sobic006G143400 Sobic004G247600--Sobic006G143400 Sobic006G158600 Sobic006G158600 Sobic004G247600--Sobic006G158600 Sobic009G221400 Sobic009G221400 Sobic004G247600--Sobic009G221400 Sobic001G281400 Sobic001G281400 Sobic004G247600--Sobic001G281400 Sobic003G041600 Sobic003G041600 Sobic004G247600--Sobic003G041600 Sobic010G259600 Sobic010G259600 Sobic004G247600--Sobic010G259600 Sobic007G155000 Sobic007G155000 Sobic004G247600--Sobic007G155000 Sobic004G247600--Sobic007G025500 Sobic005G075900--Sobic010G099600 Sobic007G156700 Sobic007G156700 Sobic005G075900--Sobic007G156700 Sobic001G437000 Sobic001G437000 Sobic005G075900--Sobic001G437000 Sobic005G075900--Sobic002G245900 Sobic001G219200 Sobic001G219200 Sobic005G075900--Sobic001G219200 Sobic002G278500 Sobic002G278500 Sobic005G075900--Sobic002G278500 Sobic005G122500 Sobic005G122500 Sobic005G075900--Sobic005G122500 Sobic002G140300 Sobic002G140300 Sobic005G075900--Sobic002G140300 Sobic001G440200 Sobic001G440200 Sobic005G075900--Sobic001G440200 Sobic009G008300 Sobic009G008300 Sobic002G245900--Sobic009G008300 Sobic007G133600 Sobic007G133600 Sobic002G245900--Sobic007G133600 Sobic010G067300 Sobic010G067300 Sobic002G245900--Sobic010G067300 Sobic001G076800 Sobic001G076800 Sobic002G245900--Sobic001G076800 Sobic002G245900--Sobic004G335600 Sobic004G042700 Sobic004G042700 Sobic002G245900--Sobic004G042700 Sobic004G099500 Sobic004G099500 Sobic002G245900--Sobic004G099500 Sobic001G239400 Sobic001G239400 Sobic002G245900--Sobic001G239400 Sobic009G032700 Sobic009G032700 Sobic002G245900--Sobic009G032700 Sobic009G105700 Sobic009G105700 Sobic009G105600--Sobic009G105700 Sobic004G331400 Sobic004G331400 Sobic009G105600--Sobic004G331400 Sobic002G175100 Sobic002G175100 Sobic009G105600--Sobic002G175100 Sobic004G271400 Sobic004G271400 Sobic009G105600--Sobic004G271400 Sobic002G414700 Sobic002G414700 Sobic009G105600--Sobic002G414700 Sobic007G184600 Sobic007G184600 Sobic009G105600--Sobic007G184600 Sobic003G322400 Sobic003G322400 Sobic009G105600--Sobic003G322400 Sobic006G047400 Sobic006G047400 Sobic009G105600--Sobic006G047400 Sobic001G374700 Sobic001G374700 Sobic009G105600--Sobic001G374700 Sobic010G204600 Sobic010G204600 Sobic004G157000--Sobic010G204600 Sobic009G046600 Sobic009G046600 Sobic004G157000--Sobic009G046600 Sobic003G249800 Sobic003G249800 Sobic004G157000--Sobic003G249800 Sobic002G046100 Sobic002G046100 Sobic004G157000--Sobic002G046100 Sobic009G129000 Sobic009G129000 Sobic004G157000--Sobic009G129000 Sobic004G157000--Sobic009G023200 Sobic009G033700 Sobic009G033700 Sobic004G157000--Sobic009G033700 Sobic002G345300 Sobic002G345300 Sobic004G157000--Sobic002G345300 Sobic003G285800 Sobic003G285800 Sobic004G157000--Sobic003G285800 Sobic007G131800--Sobic004G335600 Sobic007G131800--Sobic002G245900 Sobic007G131800--Sobic007G133600 Sobic007G131800--Sobic009G008300 Sobic007G131800--Sobic010G099600 Sobic007G131800--Sobic006G157200 Sobic007G131800--Sobic004G042700 Sobic003G118900 Sobic003G118900 Sobic007G131800--Sobic003G118900 Sobic006G206000 Sobic006G206000 Sobic007G131800--Sobic006G206000
Octagon: transcription factors


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