Gene annotation
Transcriptome id Sobic.006G278600.1
Synonym Sb06g033940
Functional annotation oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed
UniProt A0A1Z5RGS6
Pfam PF13532
Panther DB PTHR31447 PTHR31447:SF3
NCBI CDD KOG4176; Uncharacterized conserved protein
KEGG Orthology K10767; mRNA N6-methyladenine demethylase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G36090 : oxidoreductase, 2OG-Fe(II) oxygenase family protein
RAP-DB (Rice) LOC_Os06g04660.1 : oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ85479
Barley HORVU2Hr1G125630.7 , HORVU2Hr1G125630.5 , HORVU2Hr1G125630.9 , HORVU2Hr1G125630.8 , HORVU5Hr1G058580.3 , HORVU5Hr1G058580.2 , HORVU5Hr1G058580.1
Wheat TraesCS2D02G579400 , TraesCS2D02G579000 , TraesCS2A02G568300 , TraesCS2B02G628500
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G206550 - -
2 Sobic.002G003100 gibberellin 2-beta-dioxygenase 7, putative, expressed K04125: gibberellin 2beta-dioxygenase
3 Sobic.004G089700 - -
4 Sobic.007G157550 - -
5 Sobic.004G347866 - -
6 Sobic.005G209800 nodulin, putative, expressed -
7 Sobic.002G048250 - -
8 Sobic.001G457100 - -
9 Sobic.005G231800 tropinone reductase, putative, expressed K08081: tropinone reductase I
10 Sobic.001G179680 - -
11 Sobic.007G183000 helix-loop-helix DNA-binding domain containing protein, expressed -
12 Sobic.006G171000 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL7 - SBP-box gene family member, expressed -
13 Sobic.002G010500 expressed protein -
14 Sobic.008G002100 zinc finger, C3HC4 type domain containing protein -
15 Sobic.009G187500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MONOCULM 1, putative, expressed -
16 Sobic.008G023000 expressed protein -
17 Sobic.009G223700 - -
18 Sobic.004G226300 expressed protein -
19 Sobic.001G527400 - -
20 Sobic.009G005800 formin-like protein 6 precursor, putative, expressed -


Gene co-expression network
sample Sobic006G278600 Sobic006G278600 Sobic007G206550 Sobic007G206550 Sobic006G278600--Sobic007G206550 Sobic002G003100 Sobic002G003100 Sobic006G278600--Sobic002G003100 Sobic004G089700 Sobic004G089700 Sobic006G278600--Sobic004G089700 Sobic007G157550 Sobic007G157550 Sobic006G278600--Sobic007G157550 Sobic004G347866 Sobic004G347866 Sobic006G278600--Sobic004G347866 Sobic005G209800 Sobic005G209800 Sobic006G278600--Sobic005G209800 Sobic002G048250 Sobic002G048250 Sobic006G278600--Sobic002G048250 Sobic001G457100 Sobic001G457100 Sobic006G278600--Sobic001G457100 Sobic005G231800 Sobic005G231800 Sobic006G278600--Sobic005G231800 Sobic007G206550--Sobic007G157550 Sobic007G206550--Sobic004G347866 Sobic001G179680 Sobic001G179680 Sobic007G206550--Sobic001G179680 Sobic007G206550--Sobic001G457100 Sobic007G206550--Sobic004G089700 Sobic007G206550--Sobic002G048250 Sobic007G183000 Sobic007G183000 Sobic007G206550--Sobic007G183000 Sobic004G355401 Sobic004G355401 Sobic007G206550--Sobic004G355401 Sobic004G224300 Sobic004G224300 Sobic007G206550--Sobic004G224300 Sobic002G003100--Sobic005G209800 Sobic002G003100--Sobic005G231800 Sobic008G002100 Sobic008G002100 Sobic002G003100--Sobic008G002100 Sobic008G023000 Sobic008G023000 Sobic002G003100--Sobic008G023000 Sobic004G226300 Sobic004G226300 Sobic002G003100--Sobic004G226300 Sobic006G171000 Sobic006G171000 Sobic002G003100--Sobic006G171000 Sobic001G527400 Sobic001G527400 Sobic002G003100--Sobic001G527400 Sobic002G003100--Sobic007G183000 Sobic005G156700 Sobic005G156700 Sobic002G003100--Sobic005G156700 Sobic004G089700--Sobic002G048250 Sobic004G089700--Sobic007G183000 Sobic004G089700--Sobic005G231800 Sobic004G089700--Sobic008G023000 Sobic004G089700--Sobic001G527400 Sobic004G089700--Sobic004G226300 Sobic004G089700--Sobic008G002100 Sobic004G089700--Sobic005G209800 Sobic004G089700--Sobic004G347866 Sobic007G157550--Sobic004G347866 Sobic007G157550--Sobic002G048250 Sobic007G157550--Sobic001G457100 Sobic007G157550--Sobic004G089700 Sobic007G157550--Sobic007G183000 Sobic009G223700 Sobic009G223700 Sobic007G157550--Sobic009G223700 Sobic007G157550--Sobic001G179680 Sobic002G339250 Sobic002G339250 Sobic007G157550--Sobic002G339250 Sobic007G157550--Sobic004G226300 Sobic004G347866--Sobic007G157550 Sobic004G347866--Sobic002G048250 Sobic004G347866--Sobic007G183000 Sobic004G347866--Sobic004G089700 Sobic004G347866--Sobic001G457100 Sobic004G347866--Sobic004G226300 Sobic004G347866--Sobic009G223700 Sobic004G347866--Sobic001G527400 Sobic004G347866--Sobic002G339250 Sobic005G209800--Sobic008G002100 Sobic005G209800--Sobic008G023000 Sobic005G209800--Sobic001G527400 Sobic005G209800--Sobic007G183000 Sobic005G209800--Sobic004G226300 Sobic005G209800--Sobic005G231800 Sobic005G209800--Sobic006G171000 Sobic003G173032 Sobic003G173032 Sobic005G209800--Sobic003G173032 Sobic005G209800--Sobic002G048250 Sobic002G048250--Sobic007G183000 Sobic002G048250--Sobic001G527400 Sobic002G048250--Sobic004G226300 Sobic002G048250--Sobic008G023000 Sobic002G048250--Sobic008G002100 Sobic002G048250--Sobic005G231800 Sobic002G048250--Sobic005G209800 Sobic002G048250--Sobic003G173032 Sobic002G048250--Sobic004G224300 Sobic001G457100--Sobic009G223700 Sobic001G457100--Sobic004G347866 Sobic001G457100--Sobic004G089700 Sobic001G457100--Sobic004G226300 Sobic001G457100--Sobic002G048250 Sobic001G457100--Sobic007G183000 Sobic001G457100--Sobic007G157550 Sobic001G457100--Sobic005G231800 Sobic003G290700 Sobic003G290700 Sobic001G457100--Sobic003G290700 Sobic005G231800--Sobic008G023000 Sobic005G231800--Sobic001G527400 Sobic005G231800--Sobic008G002100 Sobic005G231800--Sobic007G183000 Sobic005G231800--Sobic004G226300 Sobic005G231800--Sobic005G209800 Sobic005G231800--Sobic002G048250 Sobic005G231800--Sobic003G173032 Sobic005G231800--Sobic006G171000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.