Gene annotation
Transcriptome id Sobic.001G244400.1,Sobic.001G244400.2,Sobic.001G244400.3
Synonym Sb01g021660, IQD19
Functional annotation IQ calmodulin-binding motif family protein, putative, expressed
UniProt A0A1B6QKR1 , A0A1Z5S775 , A0A1Z5S750
Pfam PF00612 PF13178 PF13178
Panther DB PTHR32295 PTHR32295:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G14750 : IQ-domain 19
RAP-DB (Rice) LOC_Os03g06570.1,LOC_Os10g28420.1 : IQ calmodulin-binding motif family protein, putative, expressed
MaizeGDB (Corn) Zm00025a006894 , Zm00025a007338 , Zm00025a053456
Brachypodium KQJ84110 , KQJ84111 , KQJ84109
Barley HORVU2Hr1G106540.1 , HORVU2Hr1G106550.3 , HORVU2Hr1G106550.2
Wheat TraesCS2A02G470100 , TraesCS2D02G398300 , TraesCS2D02G470000 , TraesCS2B02G492900 , TraesCS2B02G418900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G098900 syntaxin-related protein, putative, expressed K08486: syntaxin 1B/2/3
2 Sobic.009G064600 phototropic-responsive NPH3 family protein, putative, expressed -
3 Sobic.003G414400 expressed protein -
4 Sobic.010G215300 cyclin-dependent kinase B2-1, putative, expressed K07760: cyclin-dependent kinase
5 Sobic.006G155900 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
6 Sobic.010G202100 expressed protein -
7 Sobic.009G190400 expressed protein -
8 Sobic.010G234800 expressed protein -
9 Sobic.003G047200 expressed protein -
10 Sobic.001G284900 expressed protein -
11 Sobic.004G237300 PCF-like (ClassI) Subclade 5 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP-domain protein, putative, expressed -
12 Sobic.001G397700 DNAJ heat shock N-terminal domain-containing protein, putative, expressed -
13 Sobic.001G462100 MFP1 attachment factor 1, putative, expressed -
14 Sobic.003G040100 PHD-finger domain containing protein, putative, expressed K11380: NuA3 HAT complex component NTO1
15 Sobic.004G198200 expressed protein -
16 Sobic.007G019600 expressed protein -
17 Sobic.002G293800 expressed protein -
18 Sobic.004G133000 - -
19 Sobic.006G176400 ATROPGEF7/ROPGEF7, putative, expressed -
20 Sobic.003G415500 RALFL1 - Rapid ALkalinization Factor RALF family protein precursor, putative, expressed -


Gene co-expression network
sample Sobic001G244400 Sobic001G244400 Sobic001G098900 Sobic001G098900 Sobic001G244400--Sobic001G098900 Sobic009G064600 Sobic009G064600 Sobic001G244400--Sobic009G064600 Sobic003G414400 Sobic003G414400 Sobic001G244400--Sobic003G414400 Sobic010G215300 Sobic010G215300 Sobic001G244400--Sobic010G215300 Sobic006G155900 Sobic006G155900 Sobic001G244400--Sobic006G155900 Sobic010G202100 Sobic010G202100 Sobic001G244400--Sobic010G202100 Sobic009G190400 Sobic009G190400 Sobic001G244400--Sobic009G190400 Sobic010G234800 Sobic010G234800 Sobic001G244400--Sobic010G234800 Sobic003G047200 Sobic003G047200 Sobic001G244400--Sobic003G047200 Sobic001G098900--Sobic010G215300 Sobic001G098900--Sobic010G234800 Sobic001G098900--Sobic010G202100 Sobic001G098900--Sobic001G244400 Sobic001G098900--Sobic003G047200 Sobic001G098900--Sobic003G414400 Sobic002G293800 Sobic002G293800 Sobic001G098900--Sobic002G293800 Sobic008G114500 Sobic008G114500 Sobic001G098900--Sobic008G114500 Sobic001G098900--Sobic006G155900 Sobic009G064600--Sobic009G190400 Sobic009G064600--Sobic001G244400 Sobic009G064600--Sobic006G155900 Sobic003G040100 Sobic003G040100 Sobic009G064600--Sobic003G040100 Sobic009G064600--Sobic001G098900 Sobic001G062700 Sobic001G062700 Sobic009G064600--Sobic001G062700 Sobic007G153300 Sobic007G153300 Sobic009G064600--Sobic007G153300 Sobic004G061600 Sobic004G061600 Sobic009G064600--Sobic004G061600 Sobic001G462100 Sobic001G462100 Sobic009G064600--Sobic001G462100 Sobic001G284900 Sobic001G284900 Sobic003G414400--Sobic001G284900 Sobic003G414400--Sobic010G215300 Sobic003G414400--Sobic001G098900 Sobic003G414400--Sobic010G202100 Sobic003G414400--Sobic003G047200 Sobic003G414400--Sobic010G234800 Sobic003G414400--Sobic006G155900 Sobic001G070200 Sobic001G070200 Sobic003G414400--Sobic001G070200 Sobic004G271300 Sobic004G271300 Sobic003G414400--Sobic004G271300 Sobic010G215300--Sobic001G098900 Sobic010G215300--Sobic010G234800 Sobic010G215300--Sobic003G414400 Sobic010G215300--Sobic010G202100 Sobic001G140600 Sobic001G140600 Sobic010G215300--Sobic001G140600 Sobic010G215300--Sobic003G047200 Sobic010G215300--Sobic008G114500 Sobic001G540900 Sobic001G540900 Sobic010G215300--Sobic001G540900 Sobic010G215300--Sobic001G284900 Sobic006G155900--Sobic009G190400 Sobic004G198200 Sobic004G198200 Sobic006G155900--Sobic004G198200 Sobic006G155900--Sobic003G040100 Sobic001G494300 Sobic001G494300 Sobic006G155900--Sobic001G494300 Sobic008G020500 Sobic008G020500 Sobic006G155900--Sobic008G020500 Sobic006G155900--Sobic003G047200 Sobic006G155900--Sobic003G414400 Sobic006G155900--Sobic001G070200 Sobic001G331100 Sobic001G331100 Sobic006G155900--Sobic001G331100 Sobic010G202100--Sobic010G215300 Sobic010G202100--Sobic010G234800 Sobic010G202100--Sobic001G098900 Sobic007G017700 Sobic007G017700 Sobic010G202100--Sobic007G017700 Sobic010G202100--Sobic003G414400 Sobic009G025400 Sobic009G025400 Sobic010G202100--Sobic009G025400 Sobic010G202100--Sobic003G047200 Sobic006G201300 Sobic006G201300 Sobic010G202100--Sobic006G201300 Sobic010G202100--Sobic008G114500 Sobic009G190400--Sobic003G040100 Sobic009G190400--Sobic006G155900 Sobic009G190400--Sobic004G198200 Sobic009G190400--Sobic009G064600 Sobic003G415500 Sobic003G415500 Sobic009G190400--Sobic003G415500 Sobic009G190400--Sobic008G020500 Sobic002G282100 Sobic002G282100 Sobic009G190400--Sobic002G282100 Sobic004G156600 Sobic004G156600 Sobic009G190400--Sobic004G156600 Sobic009G190400--Sobic001G070200 Sobic010G234800--Sobic001G098900 Sobic010G234800--Sobic010G215300 Sobic010G234800--Sobic010G202100 Sobic010G234800--Sobic003G047200 Sobic010G234800--Sobic008G114500 Sobic010G234800--Sobic002G293800 Sobic010G234800--Sobic007G017700 Sobic010G234800--Sobic003G414400 Sobic010G234800--Sobic001G140600 Sobic003G047200--Sobic010G234800 Sobic003G047200--Sobic001G098900 Sobic003G047200--Sobic010G215300 Sobic001G458900 Sobic001G458900 Sobic003G047200--Sobic001G458900 Sobic003G047200--Sobic001G284900 Sobic003G047200--Sobic003G414400 Sobic003G047200--Sobic006G155900 Sobic003G047200--Sobic010G202100 Sobic002G279300 Sobic002G279300 Sobic003G047200--Sobic002G279300
Octagon: transcription factors


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