Gene annotation
Transcriptome id Sobic.003G186400.1
Synonym Sb03g025150
Functional annotation expressed protein
UniProt A0A1W0VY03
Pfam -
Panther DB PTHR21596 PTHR21596:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G53020 : Ribonuclease P protein subunit P38-related
RAP-DB (Rice) LOC_Os01g36970.1 : expressed protein
MaizeGDB (Corn) Zm00025a028798
Brachypodium KQK08241
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G300400 expressed protein -
2 Sobic.002G032500 leucine-rich repeat family protein, putative, expressed -
3 Sobic.002G419200 inactive receptor kinase At2g26730 precursor, putative, expressed -
4 Sobic.003G116100 pectinesterase, putative, expressed K01051: pectinesterase
5 Sobic.005G091000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
6 Sobic.007G180200 NC domain-containing protein, putative, expressed -
7 Sobic.003G309400 OsSub4 - Putative Subtilisin homologue, expressed -
8 Sobic.010G010900 expressed protein -
9 Sobic.001G488900 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
10 Sobic.001G142200 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
11 Sobic.006G272500 "PKc_like super family, protein kjinases, catalytic domain"(PubMedID : 29491869)@expressed protein -
12 Sobic.007G094200 expressed protein -
13 Sobic.003G356600 ATROPGEF7/ROPGEF7, putative, expressed -
14 Sobic.009G172700 expressed protein -
15 Sobic.005G098400 "domain confirmed by Pfam database, expressed in leaf and root"(PubMedID : 20499123)@OsIAA27 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
16 Sobic.001G398300 expressed protein -
17 Sobic.002G229700 expressed protein -
18 Sobic.008G093600 expressed protein -
19 Sobic.001G285200 protein transport protein-related, putative, expressed -
20 Sobic.005G021900 expressed protein -


Gene co-expression network
sample Sobic003G186400 Sobic003G186400 Sobic003G300400 Sobic003G300400 Sobic003G186400--Sobic003G300400 Sobic002G032500 Sobic002G032500 Sobic003G186400--Sobic002G032500 Sobic002G419200 Sobic002G419200 Sobic003G186400--Sobic002G419200 Sobic003G116100 Sobic003G116100 Sobic003G186400--Sobic003G116100 Sobic005G091000 Sobic005G091000 Sobic003G186400--Sobic005G091000 Sobic007G180200 Sobic007G180200 Sobic003G186400--Sobic007G180200 Sobic003G309400 Sobic003G309400 Sobic003G186400--Sobic003G309400 Sobic010G010900 Sobic010G010900 Sobic003G186400--Sobic010G010900 Sobic001G488900 Sobic001G488900 Sobic003G186400--Sobic001G488900 Sobic003G300400--Sobic003G309400 Sobic003G300400--Sobic002G032500 Sobic003G300400--Sobic002G419200 Sobic009G254500 Sobic009G254500 Sobic003G300400--Sobic009G254500 Sobic007G094200 Sobic007G094200 Sobic003G300400--Sobic007G094200 Sobic003G339600 Sobic003G339600 Sobic003G300400--Sobic003G339600 Sobic002G229700 Sobic002G229700 Sobic003G300400--Sobic002G229700 Sobic008G154700 Sobic008G154700 Sobic003G300400--Sobic008G154700 Sobic009G141300 Sobic009G141300 Sobic003G300400--Sobic009G141300 Sobic002G032500--Sobic003G309400 Sobic002G032500--Sobic007G094200 Sobic002G032500--Sobic003G300400 Sobic007G211200 Sobic007G211200 Sobic002G032500--Sobic007G211200 Sobic004G211700 Sobic004G211700 Sobic002G032500--Sobic004G211700 Sobic003G089300 Sobic003G089300 Sobic002G032500--Sobic003G089300 Sobic004G248100 Sobic004G248100 Sobic002G032500--Sobic004G248100 Sobic002G032500--Sobic005G091000 Sobic003G338200 Sobic003G338200 Sobic002G032500--Sobic003G338200 Sobic002G419200--Sobic003G300400 Sobic002G419200--Sobic003G338200 Sobic002G419200--Sobic003G116100 Sobic002G419200--Sobic003G309400 Sobic003G277200 Sobic003G277200 Sobic002G419200--Sobic003G277200 Sobic001G285200 Sobic001G285200 Sobic002G419200--Sobic001G285200 Sobic002G419200--Sobic002G032500 Sobic002G419200--Sobic004G248100 Sobic002G419200--Sobic003G339600 Sobic003G116100--Sobic002G419200 Sobic003G116100--Sobic007G094200 Sobic003G116100--Sobic003G338200 Sobic006G219100 Sobic006G219100 Sobic003G116100--Sobic006G219100 Sobic006G044200 Sobic006G044200 Sobic003G116100--Sobic006G044200 Sobic001G488400 Sobic001G488400 Sobic003G116100--Sobic001G488400 Sobic003G116100--Sobic003G277200 Sobic003G116100--Sobic003G300400 Sobic008G187400 Sobic008G187400 Sobic003G116100--Sobic008G187400 Sobic005G091000--Sobic002G032500 Sobic006G105600 Sobic006G105600 Sobic005G091000--Sobic006G105600 Sobic001G267100 Sobic001G267100 Sobic005G091000--Sobic001G267100 Sobic005G091000--Sobic003G309400 Sobic005G091000--Sobic003G089300 Sobic005G091000--Sobic003G338200 Sobic001G381100 Sobic001G381100 Sobic005G091000--Sobic001G381100 Sobic002G224200 Sobic002G224200 Sobic005G091000--Sobic002G224200 Sobic006G074900 Sobic006G074900 Sobic005G091000--Sobic006G074900 Sobic005G199700 Sobic005G199700 Sobic007G180200--Sobic005G199700 Sobic007G165800 Sobic007G165800 Sobic007G180200--Sobic007G165800 Sobic001G299600 Sobic001G299600 Sobic007G180200--Sobic001G299600 Sobic003G338700 Sobic003G338700 Sobic007G180200--Sobic003G338700 Sobic003G027100 Sobic003G027100 Sobic007G180200--Sobic003G027100 Sobic009G146700 Sobic009G146700 Sobic007G180200--Sobic009G146700 Sobic001G199400 Sobic001G199400 Sobic007G180200--Sobic001G199400 Sobic010G014700 Sobic010G014700 Sobic007G180200--Sobic010G014700 Sobic010G235300 Sobic010G235300 Sobic007G180200--Sobic010G235300 Sobic003G309400--Sobic003G300400 Sobic003G309400--Sobic002G032500 Sobic003G309400--Sobic004G248100 Sobic003G309400--Sobic003G338200 Sobic003G309400--Sobic009G254500 Sobic003G309400--Sobic007G094200 Sobic003G309400--Sobic002G229700 Sobic003G309400--Sobic009G141300 Sobic002G011000 Sobic002G011000 Sobic003G309400--Sobic002G011000 Sobic010G010900--Sobic001G488900 Sobic006G272500 Sobic006G272500 Sobic010G010900--Sobic006G272500 Sobic010G010900--Sobic003G309400 Sobic010G010900--Sobic002G419200 Sobic010G010900--Sobic003G300400 Sobic009G172700 Sobic009G172700 Sobic010G010900--Sobic009G172700 Sobic001G267800 Sobic001G267800 Sobic010G010900--Sobic001G267800 Sobic010G010900--Sobic002G032500 Sobic002G071850 Sobic002G071850 Sobic010G010900--Sobic002G071850 Sobic001G488900--Sobic001G299600 Sobic001G488900--Sobic010G010900 Sobic001G488900--Sobic007G180200 Sobic001G488900--Sobic001G199400 Sobic001G488900--Sobic005G199700 Sobic003G356600 Sobic003G356600 Sobic001G488900--Sobic003G356600 Sobic003G052000 Sobic003G052000 Sobic001G488900--Sobic003G052000 Sobic001G488900--Sobic009G146700 Sobic006G219500 Sobic006G219500 Sobic001G488900--Sobic006G219500
Octagon: transcription factors


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