Gene annotation
Transcriptome id Sobic.003G236150.1
Synonym -
Functional annotation -
UniProt A0A1W0VYP2
Pfam PF01535
Panther DB PTHR24015 PTHR24015:SF389
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G53360 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os01g68524.1 : pentatricopeptide, putative, expressed
MaizeGDB (Corn) Zm00025a039368
Brachypodium KQK11160
Barley -
Wheat TraesCS3D02G414500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G199800 BTB/POZ domain containing protein, expressed K10523: speckle-type POZ protein
2 Sobic.006G281900 down-regulated TF in developmental senescence(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
3 Sobic.007G187700 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
4 Sobic.007G050800 abhydrolase domain-containing protein FAM108C1, putative, expressed -
5 Sobic.002G168000 expressed protein -
6 Sobic.010G175000 expressed protein -
7 Sobic.006G262501 - -
8 Sobic.001G264201 - -
9 Sobic.003G290400 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
10 Sobic.005G153000 agenet domain containing protein, expressed -
11 Sobic.009G105400 OsFBX135 - F-box domain containing protein, expressed -
12 Sobic.008G118100 kelch repeat protein, putative, expressed -
13 Sobic.002G187600 expressed protein -
14 Sobic.001G199500 heat shock protein DnaJ, putative, expressed K09531: DnaJ homolog subfamily C member 11
15 Sobic.001G242500 - -
16 Sobic.002G055800 zinc finger, C3HC4 type domain containing protein, expressed K16277: E3 ubiquitin-protein ligase DRIP
17 Sobic.004G282601 - -
18 Sobic.009G002200 formin-like protein 1 precursor, putative, expressed -
19 Sobic.002G095300 deoxynucleoside kinase family, putative, expressed K00893: deoxycitidine kinase
20 Sobic.009G077300 protein kinase, putative, expressed -


Gene co-expression network
sample Sobic003G236150 Sobic003G236150 Sobic007G199800 Sobic007G199800 Sobic003G236150--Sobic007G199800 Sobic006G281900 Sobic006G281900 Sobic003G236150--Sobic006G281900 Sobic007G187700 Sobic007G187700 Sobic003G236150--Sobic007G187700 Sobic007G050800 Sobic007G050800 Sobic003G236150--Sobic007G050800 Sobic002G168000 Sobic002G168000 Sobic003G236150--Sobic002G168000 Sobic010G175000 Sobic010G175000 Sobic003G236150--Sobic010G175000 Sobic006G262501 Sobic006G262501 Sobic003G236150--Sobic006G262501 Sobic001G264201 Sobic001G264201 Sobic003G236150--Sobic001G264201 Sobic003G290400 Sobic003G290400 Sobic003G236150--Sobic003G290400 Sobic009G060600 Sobic009G060600 Sobic007G199800--Sobic009G060600 Sobic007G199800--Sobic007G050800 Sobic007G199800--Sobic003G236150 Sobic005G036200 Sobic005G036200 Sobic007G199800--Sobic005G036200 Sobic002G367200 Sobic002G367200 Sobic007G199800--Sobic002G367200 Sobic002G055800 Sobic002G055800 Sobic007G199800--Sobic002G055800 Sobic007G192200 Sobic007G192200 Sobic007G199800--Sobic007G192200 Sobic009G002200 Sobic009G002200 Sobic007G199800--Sobic009G002200 Sobic009G012600 Sobic009G012600 Sobic007G199800--Sobic009G012600 Sobic006G281900--Sobic002G168000 Sobic002G021200 Sobic002G021200 Sobic006G281900--Sobic002G021200 Sobic009G188900 Sobic009G188900 Sobic006G281900--Sobic009G188900 Sobic001G290500 Sobic001G290500 Sobic006G281900--Sobic001G290500 Sobic001G199500 Sobic001G199500 Sobic006G281900--Sobic001G199500 Sobic001G425700 Sobic001G425700 Sobic006G281900--Sobic001G425700 Sobic009G225500 Sobic009G225500 Sobic006G281900--Sobic009G225500 Sobic006G281900--Sobic007G187700 Sobic003G024000 Sobic003G024000 Sobic006G281900--Sobic003G024000 Sobic007G187700--Sobic002G168000 Sobic007G187700--Sobic002G021200 Sobic005G153000 Sobic005G153000 Sobic007G187700--Sobic005G153000 Sobic001G104500 Sobic001G104500 Sobic007G187700--Sobic001G104500 Sobic001G377700 Sobic001G377700 Sobic007G187700--Sobic001G377700 Sobic006G275500 Sobic006G275500 Sobic007G187700--Sobic006G275500 Sobic004G317000 Sobic004G317000 Sobic007G187700--Sobic004G317000 Sobic004G282601 Sobic004G282601 Sobic007G187700--Sobic004G282601 Sobic009G077300 Sobic009G077300 Sobic007G187700--Sobic009G077300 Sobic007G050800--Sobic009G002200 Sobic006G016700 Sobic006G016700 Sobic007G050800--Sobic006G016700 Sobic008G118100 Sobic008G118100 Sobic007G050800--Sobic008G118100 Sobic006G226000 Sobic006G226000 Sobic007G050800--Sobic006G226000 Sobic007G050800--Sobic002G168000 Sobic007G050800--Sobic005G153000 Sobic006G135800 Sobic006G135800 Sobic007G050800--Sobic006G135800 Sobic007G050800--Sobic007G187700 Sobic007G050800--Sobic009G012600 Sobic002G168000--Sobic007G187700 Sobic002G168000--Sobic005G153000 Sobic002G168000--Sobic002G021200 Sobic002G168000--Sobic006G281900 Sobic002G168000--Sobic006G275500 Sobic002G168000--Sobic009G188900 Sobic002G168000--Sobic009G077300 Sobic002G168000--Sobic006G016700 Sobic002G168000--Sobic001G104500 Sobic004G192500 Sobic004G192500 Sobic010G175000--Sobic004G192500 Sobic010G257000 Sobic010G257000 Sobic010G175000--Sobic010G257000 Sobic010G175000--Sobic006G226000 Sobic010G175000--Sobic009G188900 Sobic010G175000--Sobic006G281900 Sobic010G175000--Sobic006G275500 Sobic010G175000--Sobic006G016700 Sobic010G175000--Sobic002G168000 Sobic010G175000--Sobic002G055800 Sobic005G045700 Sobic005G045700 Sobic006G262501--Sobic005G045700 Sobic002G127900 Sobic002G127900 Sobic006G262501--Sobic002G127900 Sobic006G262501--Sobic005G036200 Sobic006G262501--Sobic008G118100 Sobic003G368901 Sobic003G368901 Sobic006G262501--Sobic003G368901 Sobic006G262501--Sobic009G012600 Sobic006G262501--Sobic007G050800 Sobic005G139300 Sobic005G139300 Sobic006G262501--Sobic005G139300 Sobic006G262501--Sobic010G175000 Sobic001G264201--Sobic006G281900 Sobic009G105400 Sobic009G105400 Sobic001G264201--Sobic009G105400 Sobic004G199200 Sobic004G199200 Sobic001G264201--Sobic004G199200 Sobic001G264201--Sobic010G175000 Sobic002G284400 Sobic002G284400 Sobic001G264201--Sobic002G284400 Sobic006G084300 Sobic006G084300 Sobic001G264201--Sobic006G084300 Sobic002G416150 Sobic002G416150 Sobic001G264201--Sobic002G416150 Sobic008G090000 Sobic008G090000 Sobic001G264201--Sobic008G090000 Sobic001G264201--Sobic006G262501 Sobic003G290400--Sobic005G153000 Sobic003G290400--Sobic009G002200 Sobic003G290400--Sobic004G282601 Sobic003G290400--Sobic009G077300 Sobic006G221300 Sobic006G221300 Sobic003G290400--Sobic006G221300 Sobic002G027600 Sobic002G027600 Sobic003G290400--Sobic002G027600 Sobic003G290400--Sobic006G135800 Sobic007G162400 Sobic007G162400 Sobic003G290400--Sobic007G162400 Sobic003G259300 Sobic003G259300 Sobic003G290400--Sobic003G259300
Octagon: transcription factors


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