Gene annotation
Transcriptome id Sobic.004G179800.1
Synonym
Functional annotation expressed protein
UniProt C5XUV6
Pfam -
Panther DB PTHR31358 PTHR31358:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G70950 : TPX2 (targeting protein for Xklp2) protein family
RAP-DB (Rice) LOC_Os02g35230.1 : expressed protein
MaizeGDB (Corn) Zm00025a020706
Brachypodium PNT68840 , PNT68841 , KQJ99914
Barley HORVU6Hr1G033310.29 , HORVU6Hr1G033310.28 , HORVU6Hr1G033310.21 , HORVU6Hr1G033310.20 , HORVU6Hr1G033310.23 , HORVU6Hr1G033310.22 , HORVU6Hr1G033310.25 , HORVU6Hr1G033310.24 , HORVU6Hr1G033310.27 , HORVU6Hr1G033310.26 , HORVU6Hr1G033310.49 , HORVU6Hr1G033310.48 , HORVU6Hr1G033310.38 , HORVU6Hr1G033310.39 , HORVU6Hr1G033310.36 , HORVU6Hr1G033310.37 , HORVU6Hr1G033310.34 , HORVU6Hr1G033310.35 , HORVU6Hr1G033310.32 , HORVU6Hr1G033310.33 , HORVU6Hr1G033310.30 , HORVU6Hr1G033310.31 , HORVU6Hr1G033310.43 , HORVU6Hr1G033310.42 , HORVU6Hr1G033310.41 , HORVU6Hr1G033310.40 , HORVU6Hr1G033310.47 , HORVU6Hr1G033310.46 , HORVU6Hr1G033310.45 , HORVU6Hr1G033310.44 , HORVU6Hr1G033310.8 , HORVU6Hr1G033310.9 , HORVU6Hr1G033310.6 , HORVU6Hr1G033310.7 , HORVU6Hr1G033310.4 , HORVU6Hr1G033310.5 , HORVU6Hr1G033310.2 , HORVU6Hr1G033310.3 , HORVU6Hr1G033310.1 , HORVU6Hr1G033310.14 , HORVU6Hr1G033310.15 , HORVU6Hr1G033310.16 , HORVU6Hr1G033310.17 , HORVU6Hr1G033310.10 , HORVU6Hr1G033310.11 , HORVU6Hr1G033310.12 , HORVU6Hr1G033310.13 , HORVU6Hr1G033310.18 , HORVU6Hr1G033310.19
Wheat TraesCS6B02G192000 , TraesCS6A02G159300 , TraesCS6D02G153200
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G142500 protein kinase, putative, expressed -
2 Sobic.010G024500 expressed protein -
3 Sobic.008G190000 leucine-rich repeat family protein, putative, expressed -
4 Sobic.009G225500 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
5 Sobic.010G192500 anthranilate phosphoribosyltransferase, putative, expressed -
6 Sobic.005G163400 dnaJ domain containing protein, expressed -
7 Sobic.003G104100 expressed protein -
8 Sobic.009G047000 E3 ubiquitin-protein ligase SINA-like 2, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
9 Sobic.003G366000 DUF623 domain containing protein, expressed -
10 Sobic.001G244900 type I inositol-1,4,5-trisphosphate 5-phosphatase, putative, expressed -
11 Sobic.010G275800 callose synthase-like enzyme(PubMedID : 25311645)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
12 Sobic.003G411800 receptor-like protein kinase 2 precursor, putative, expressed -
13 Sobic.001G381100 receptor-like protein kinase precursor, putative, expressed -
14 Sobic.001G390400 expressed protein -
15 Sobic.005G092700 expressed protein -
16 Sobic.007G160300 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
17 Sobic.001G064600 IQ calmodulin-binding motif domain containing protein, expressed -
18 Sobic.006G272500 "PKc_like super family, protein kjinases, catalytic domain"(PubMedID : 29491869)@expressed protein -
19 Sobic.001G008300 expressed protein -
20 Sobic.003G031700 protein kinase family protein, putative, expressed -


Gene co-expression network
sample Sobic004G179800 Sobic004G179800 Sobic006G142500 Sobic006G142500 Sobic004G179800--Sobic006G142500 Sobic010G024500 Sobic010G024500 Sobic004G179800--Sobic010G024500 Sobic008G190000 Sobic008G190000 Sobic004G179800--Sobic008G190000 Sobic009G225500 Sobic009G225500 Sobic004G179800--Sobic009G225500 Sobic010G192500 Sobic010G192500 Sobic004G179800--Sobic010G192500 Sobic005G163400 Sobic005G163400 Sobic004G179800--Sobic005G163400 Sobic003G104100 Sobic003G104100 Sobic004G179800--Sobic003G104100 Sobic009G047000 Sobic009G047000 Sobic004G179800--Sobic009G047000 Sobic003G366000 Sobic003G366000 Sobic004G179800--Sobic003G366000 Sobic010G086000 Sobic010G086000 Sobic006G142500--Sobic010G086000 Sobic004G267600 Sobic004G267600 Sobic006G142500--Sobic004G267600 Sobic006G142500--Sobic010G192500 Sobic006G142500--Sobic009G225500 Sobic003G032200 Sobic003G032200 Sobic006G142500--Sobic003G032200 Sobic004G234500 Sobic004G234500 Sobic006G142500--Sobic004G234500 Sobic009G127800 Sobic009G127800 Sobic006G142500--Sobic009G127800 Sobic006G142500--Sobic009G047000 Sobic001G390400 Sobic001G390400 Sobic006G142500--Sobic001G390400 Sobic010G024500--Sobic005G163400 Sobic010G024500--Sobic008G190000 Sobic010G024500--Sobic001G390400 Sobic006G241800 Sobic006G241800 Sobic010G024500--Sobic006G241800 Sobic008G083500 Sobic008G083500 Sobic010G024500--Sobic008G083500 Sobic001G381100 Sobic001G381100 Sobic010G024500--Sobic001G381100 Sobic002G319300 Sobic002G319300 Sobic010G024500--Sobic002G319300 Sobic010G024500--Sobic010G192500 Sobic004G164700 Sobic004G164700 Sobic010G024500--Sobic004G164700 Sobic008G190000--Sobic001G381100 Sobic005G092700 Sobic005G092700 Sobic008G190000--Sobic005G092700 Sobic001G160000 Sobic001G160000 Sobic008G190000--Sobic001G160000 Sobic008G190000--Sobic010G024500 Sobic008G190000--Sobic003G366000 Sobic008G042200 Sobic008G042200 Sobic008G190000--Sobic008G042200 Sobic002G286700 Sobic002G286700 Sobic008G190000--Sobic002G286700 Sobic009G200000 Sobic009G200000 Sobic008G190000--Sobic009G200000 Sobic004G115700 Sobic004G115700 Sobic008G190000--Sobic004G115700 Sobic009G225500--Sobic009G127800 Sobic003G259300 Sobic003G259300 Sobic009G225500--Sobic003G259300 Sobic009G225500--Sobic006G142500 Sobic006G221300 Sobic006G221300 Sobic009G225500--Sobic006G221300 Sobic009G225500--Sobic010G086000 Sobic001G425700 Sobic001G425700 Sobic009G225500--Sobic001G425700 Sobic009G225500--Sobic004G179800 Sobic006G272800 Sobic006G272800 Sobic009G225500--Sobic006G272800 Sobic006G281900 Sobic006G281900 Sobic009G225500--Sobic006G281900 Sobic009G060800 Sobic009G060800 Sobic010G192500--Sobic009G060800 Sobic003G089300 Sobic003G089300 Sobic010G192500--Sobic003G089300 Sobic002G337600 Sobic002G337600 Sobic010G192500--Sobic002G337600 Sobic010G192500--Sobic003G366000 Sobic010G241100 Sobic010G241100 Sobic010G192500--Sobic010G241100 Sobic001G155700 Sobic001G155700 Sobic010G192500--Sobic001G155700 Sobic001G493900 Sobic001G493900 Sobic010G192500--Sobic001G493900 Sobic010G192500--Sobic002G319300 Sobic009G208300 Sobic009G208300 Sobic010G192500--Sobic009G208300 Sobic005G163400--Sobic010G024500 Sobic005G163400--Sobic001G390400 Sobic009G077300 Sobic009G077300 Sobic005G163400--Sobic009G077300 Sobic005G163400--Sobic003G104100 Sobic008G052300 Sobic008G052300 Sobic005G163400--Sobic008G052300 Sobic005G163400--Sobic008G190000 Sobic001G054700 Sobic001G054700 Sobic005G163400--Sobic001G054700 Sobic005G153000 Sobic005G153000 Sobic005G163400--Sobic005G153000 Sobic002G050700 Sobic002G050700 Sobic005G163400--Sobic002G050700 Sobic001G395200 Sobic001G395200 Sobic003G104100--Sobic001G395200 Sobic003G104100--Sobic008G052300 Sobic003G104100--Sobic005G163400 Sobic003G104100--Sobic001G425700 Sobic006G067700 Sobic006G067700 Sobic003G104100--Sobic006G067700 Sobic003G104100--Sobic010G024500 Sobic003G104100--Sobic004G179800 Sobic006G084300 Sobic006G084300 Sobic003G104100--Sobic006G084300 Sobic009G259900 Sobic009G259900 Sobic003G104100--Sobic009G259900 Sobic009G047000--Sobic006G142500 Sobic009G047000--Sobic004G267600 Sobic009G047000--Sobic010G192500 Sobic009G047000--Sobic004G179800 Sobic009G047000--Sobic010G086000 Sobic002G417000 Sobic002G417000 Sobic009G047000--Sobic002G417000 Sobic009G047000--Sobic010G024500 Sobic009G202801 Sobic009G202801 Sobic009G047000--Sobic009G202801 Sobic003G292700 Sobic003G292700 Sobic009G047000--Sobic003G292700 Sobic006G110850 Sobic006G110850 Sobic003G366000--Sobic006G110850 Sobic006G187000 Sobic006G187000 Sobic003G366000--Sobic006G187000 Sobic003G366000--Sobic009G060800 Sobic004G302700 Sobic004G302700 Sobic003G366000--Sobic004G302700 Sobic003G366000--Sobic010G192500 Sobic003G366000--Sobic001G390400 Sobic003G366000--Sobic001G160000 Sobic001G046400 Sobic001G046400 Sobic003G366000--Sobic001G046400 Sobic003G366000--Sobic008G190000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.