Gene annotation
Transcriptome id Sobic.001G244900.1
Synonym CVL1, Sb01g021700
Functional annotation type I inositol-1,4,5-trisphosphate 5-phosphatase, putative, expressed
UniProt C5X1I0
Pfam PF03372
Panther DB PTHR11200 PTHR11200:SF159
NCBI CDD KOG0565; Inositol polyphosphate 5-phosphatase and related proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G63240 : DNAse I-like superfamily protein
RAP-DB (Rice) LOC_Os10g28660.1 : type I inositol-1,4,5-trisphosphate 5-phosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a053455 , Zm00025a006900
Brachypodium KQJ96768
Barley HORVU4Hr1G073350.2 , HORVU4Hr1G073350.1 , HORVU4Hr1G073350.3 , HORVU4Hr1G073350.4 , HORVU4Hr1G073350.5 , HORVU4Hr1G073350.6 , HORVU4Hr1G073350.7 , HORVU4Hr1G073350.8
Wheat TraesCS4D02G275200 , TraesCS6A02G225700 , TraesCS6A02G225700 , TraesCS4A02G029300 , TraesCS4B02G276600
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G048966 - -
2 Sobic.005G092700 expressed protein -
3 Sobic.009G200000 expressed protein -
4 Sobic.009G207400 ATP binding protein, putative, expressed -
5 Sobic.001G008300 expressed protein -
6 Sobic.004G179800 expressed protein -
7 Sobic.006G142500 protein kinase, putative, expressed -
8 Sobic.001G064600 IQ calmodulin-binding motif domain containing protein, expressed -
9 Sobic.001G390400 expressed protein -
10 Sobic.003G366000 DUF623 domain containing protein, expressed -
11 Sobic.008G190000 leucine-rich repeat family protein, putative, expressed -
12 Sobic.004G115700 extra-large G-protein-related, putative, expressed -
13 Sobic.007G160300 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
14 Sobic.008G042200 DUF623 domain containing protein, expressed -
15 Sobic.001G296100 DUF630/DUF632 domains containing protein, putative, expressed -
16 Sobic.002G293700 ATXR, putative, expressed -
17 Sobic.006G240900 plant protein of unknown function DUF869 domain containing protein, expressed -
18 Sobic.009G124800 zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.003G031700 protein kinase family protein, putative, expressed -
20 Sobic.005G163400 dnaJ domain containing protein, expressed -


Gene co-expression network
sample Sobic001G244900 Sobic001G244900 Sobic008G048966 Sobic008G048966 Sobic001G244900--Sobic008G048966 Sobic005G092700 Sobic005G092700 Sobic001G244900--Sobic005G092700 Sobic009G200000 Sobic009G200000 Sobic001G244900--Sobic009G200000 Sobic009G207400 Sobic009G207400 Sobic001G244900--Sobic009G207400 Sobic001G008300 Sobic001G008300 Sobic001G244900--Sobic001G008300 Sobic004G179800 Sobic004G179800 Sobic001G244900--Sobic004G179800 Sobic006G142500 Sobic006G142500 Sobic001G244900--Sobic006G142500 Sobic001G064600 Sobic001G064600 Sobic001G244900--Sobic001G064600 Sobic001G390400 Sobic001G390400 Sobic001G244900--Sobic001G390400 Sobic008G048966--Sobic001G244900 Sobic001G019200 Sobic001G019200 Sobic008G048966--Sobic001G019200 Sobic003G104100 Sobic003G104100 Sobic008G048966--Sobic003G104100 Sobic008G048966--Sobic009G207400 Sobic006G240900 Sobic006G240900 Sobic008G048966--Sobic006G240900 Sobic008G048966--Sobic009G200000 Sobic010G257000 Sobic010G257000 Sobic008G048966--Sobic010G257000 Sobic001G296100 Sobic001G296100 Sobic008G048966--Sobic001G296100 Sobic001G395200 Sobic001G395200 Sobic008G048966--Sobic001G395200 Sobic008G190000 Sobic008G190000 Sobic005G092700--Sobic008G190000 Sobic008G042200 Sobic008G042200 Sobic005G092700--Sobic008G042200 Sobic005G092700--Sobic009G200000 Sobic004G115700 Sobic004G115700 Sobic005G092700--Sobic004G115700 Sobic003G366000 Sobic003G366000 Sobic005G092700--Sobic003G366000 Sobic001G381100 Sobic001G381100 Sobic005G092700--Sobic001G381100 Sobic001G160000 Sobic001G160000 Sobic005G092700--Sobic001G160000 Sobic005G092700--Sobic001G390400 Sobic001G075700 Sobic001G075700 Sobic005G092700--Sobic001G075700 Sobic009G200000--Sobic008G042200 Sobic009G200000--Sobic004G115700 Sobic009G200000--Sobic005G092700 Sobic009G200000--Sobic008G190000 Sobic009G200000--Sobic006G240900 Sobic009G200000--Sobic009G207400 Sobic009G200000--Sobic001G075700 Sobic009G200000--Sobic001G244900 Sobic005G125300 Sobic005G125300 Sobic009G200000--Sobic005G125300 Sobic005G163400 Sobic005G163400 Sobic009G207400--Sobic005G163400 Sobic009G207400--Sobic009G200000 Sobic009G207400--Sobic008G042200 Sobic009G207400--Sobic005G092700 Sobic010G250400 Sobic010G250400 Sobic009G207400--Sobic010G250400 Sobic009G207400--Sobic001G244900 Sobic003G147500 Sobic003G147500 Sobic009G207400--Sobic003G147500 Sobic009G207400--Sobic003G104100 Sobic008G052300 Sobic008G052300 Sobic009G207400--Sobic008G052300 Sobic002G319300 Sobic002G319300 Sobic001G008300--Sobic002G319300 Sobic006G193100 Sobic006G193100 Sobic001G008300--Sobic006G193100 Sobic007G160300 Sobic007G160300 Sobic001G008300--Sobic007G160300 Sobic010G192500 Sobic010G192500 Sobic001G008300--Sobic010G192500 Sobic001G155700 Sobic001G155700 Sobic001G008300--Sobic001G155700 Sobic001G008300--Sobic001G390400 Sobic003G031700 Sobic003G031700 Sobic001G008300--Sobic003G031700 Sobic001G493900 Sobic001G493900 Sobic001G008300--Sobic001G493900 Sobic009G202801 Sobic009G202801 Sobic001G008300--Sobic009G202801 Sobic004G179800--Sobic006G142500 Sobic010G024500 Sobic010G024500 Sobic004G179800--Sobic010G024500 Sobic004G179800--Sobic008G190000 Sobic009G225500 Sobic009G225500 Sobic004G179800--Sobic009G225500 Sobic004G179800--Sobic010G192500 Sobic004G179800--Sobic005G163400 Sobic004G179800--Sobic003G104100 Sobic009G047000 Sobic009G047000 Sobic004G179800--Sobic009G047000 Sobic004G179800--Sobic003G366000 Sobic010G086000 Sobic010G086000 Sobic006G142500--Sobic010G086000 Sobic004G267600 Sobic004G267600 Sobic006G142500--Sobic004G267600 Sobic006G142500--Sobic010G192500 Sobic006G142500--Sobic009G225500 Sobic003G032200 Sobic003G032200 Sobic006G142500--Sobic003G032200 Sobic004G234500 Sobic004G234500 Sobic006G142500--Sobic004G234500 Sobic009G127800 Sobic009G127800 Sobic006G142500--Sobic009G127800 Sobic006G142500--Sobic009G047000 Sobic006G142500--Sobic001G390400 Sobic009G060800 Sobic009G060800 Sobic001G064600--Sobic009G060800 Sobic001G064600--Sobic003G366000 Sobic001G064600--Sobic010G192500 Sobic010G058700 Sobic010G058700 Sobic001G064600--Sobic010G058700 Sobic006G187000 Sobic006G187000 Sobic001G064600--Sobic006G187000 Sobic001G064600--Sobic001G008300 Sobic009G208300 Sobic009G208300 Sobic001G064600--Sobic009G208300 Sobic004G302700 Sobic004G302700 Sobic001G064600--Sobic004G302700 Sobic009G174100 Sobic009G174100 Sobic001G064600--Sobic009G174100 Sobic001G390400--Sobic003G366000 Sobic001G390400--Sobic005G163400 Sobic006G050900 Sobic006G050900 Sobic001G390400--Sobic006G050900 Sobic002G050700 Sobic002G050700 Sobic001G390400--Sobic002G050700 Sobic001G390400--Sobic010G192500 Sobic004G317200 Sobic004G317200 Sobic001G390400--Sobic004G317200 Sobic001G390400--Sobic002G319300 Sobic001G390400--Sobic010G024500 Sobic001G390400--Sobic006G142500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.