Gene annotation
Transcriptome id Sobic.010G263400.2
Synonym Sb10g029960
Functional annotation expressed protein
UniProt A0A1W0VUZ1
Pfam PF07893
Panther DB PTHR33085 PTHR33085:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g09020.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.010G263400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G060100 expressed protein -
2 Sobic.003G258100 dynamin family protein, putative, expressed -
3 Sobic.003G072700 expressed protein -
4 Sobic.007G144100 eukaryotic translation initiation factor 3 subunit C, putative, expressed K03252: translation initiation factor 3 subunit C
5 Sobic.004G168900 elongation factor Tu family protein, putative, expressed K14536: ribosome assembly protein 1
6 Sobic.002G299500 expressed protein -
7 Sobic.003G217800 ras-related protein, putative, expressed K07936: GTP-binding nuclear protein Ran
8 Sobic.004G038400 fruit bromelain precursor, putative, expressed -
9 Sobic.004G250800 pre-mRNA-processing factor 31, putative, expressed K12844: U4/U6 small nuclear ribonucleoprotein PRP31
10 Sobic.001G506400 expressed protein -
11 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
12 Sobic.004G062200 expressed protein -
13 Sobic.006G171600 ZOS4-10 - C2H2 zinc finger protein, expressed -
14 Sobic.004G279200 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
15 Sobic.001G076600 hydrolase, acting on carbon-nitrogen, putative, expressed -
16 Sobic.004G014500 THION20 - Plant thionin family protein precursor, putative, expressed -
17 Sobic.010G058300 expressed protein -
18 Sobic.008G006700 expressed protein -
19 Sobic.010G266600 calcium-dependent protein kinase CPK1 adapter protein 2, putative, expressed -
20 Sobic.003G018000 expressed protein -


Gene co-expression network
sample Sobic010G263400 Sobic010G263400 Sobic007G060100 Sobic007G060100 Sobic010G263400--Sobic007G060100 Sobic003G258100 Sobic003G258100 Sobic010G263400--Sobic003G258100 Sobic003G072700 Sobic003G072700 Sobic010G263400--Sobic003G072700 Sobic007G144100 Sobic007G144100 Sobic010G263400--Sobic007G144100 Sobic004G168900 Sobic004G168900 Sobic010G263400--Sobic004G168900 Sobic002G299500 Sobic002G299500 Sobic010G263400--Sobic002G299500 Sobic003G217800 Sobic003G217800 Sobic010G263400--Sobic003G217800 Sobic004G038400 Sobic004G038400 Sobic010G263400--Sobic004G038400 Sobic004G250800 Sobic004G250800 Sobic010G263400--Sobic004G250800 Sobic007G060100--Sobic010G263400 Sobic007G060100--Sobic004G168900 Sobic007G060100--Sobic004G038400 Sobic001G506400 Sobic001G506400 Sobic007G060100--Sobic001G506400 Sobic007G060100--Sobic007G144100 Sobic007G060100--Sobic003G258100 Sobic007G048900 Sobic007G048900 Sobic007G060100--Sobic007G048900 Sobic001G076600 Sobic001G076600 Sobic007G060100--Sobic001G076600 Sobic001G218600 Sobic001G218600 Sobic007G060100--Sobic001G218600 Sobic003G258100--Sobic007G144100 Sobic003G258100--Sobic003G217800 Sobic003G258100--Sobic010G263400 Sobic003G258100--Sobic001G076600 Sobic003G352900 Sobic003G352900 Sobic003G258100--Sobic003G352900 Sobic003G258100--Sobic001G506400 Sobic003G258100--Sobic007G060100 Sobic003G258100--Sobic002G299500 Sobic003G018000 Sobic003G018000 Sobic003G258100--Sobic003G018000 Sobic003G072700--Sobic010G263400 Sobic004G014500 Sobic004G014500 Sobic003G072700--Sobic004G014500 Sobic006G152700 Sobic006G152700 Sobic003G072700--Sobic006G152700 Sobic003G379000 Sobic003G379000 Sobic003G072700--Sobic003G379000 Sobic007G141600 Sobic007G141600 Sobic003G072700--Sobic007G141600 Sobic003G072700--Sobic003G258100 Sobic003G072700--Sobic002G299500 Sobic006G115900 Sobic006G115900 Sobic003G072700--Sobic006G115900 Sobic007G146200 Sobic007G146200 Sobic003G072700--Sobic007G146200 Sobic007G144100--Sobic003G258100 Sobic007G144100--Sobic003G352900 Sobic007G144100--Sobic001G076600 Sobic007G144100--Sobic003G217800 Sobic010G058300 Sobic010G058300 Sobic007G144100--Sobic010G058300 Sobic007G144100--Sobic001G506400 Sobic007G144100--Sobic002G299500 Sobic004G045632 Sobic004G045632 Sobic007G144100--Sobic004G045632 Sobic007G144100--Sobic004G038400 Sobic009G048700 Sobic009G048700 Sobic004G168900--Sobic009G048700 Sobic008G056600 Sobic008G056600 Sobic004G168900--Sobic008G056600 Sobic010G038300 Sobic010G038300 Sobic004G168900--Sobic010G038300 Sobic002G097200 Sobic002G097200 Sobic004G168900--Sobic002G097200 Sobic001G417700 Sobic001G417700 Sobic004G168900--Sobic001G417700 Sobic003G211800 Sobic003G211800 Sobic004G168900--Sobic003G211800 Sobic009G145000 Sobic009G145000 Sobic004G168900--Sobic009G145000 Sobic002G243400 Sobic002G243400 Sobic004G168900--Sobic002G243400 Sobic006G266400 Sobic006G266400 Sobic004G168900--Sobic006G266400 Sobic008G171900 Sobic008G171900 Sobic002G299500--Sobic008G171900 Sobic003G376900 Sobic003G376900 Sobic002G299500--Sobic003G376900 Sobic009G163100 Sobic009G163100 Sobic002G299500--Sobic009G163100 Sobic005G020600 Sobic005G020600 Sobic002G299500--Sobic005G020600 Sobic008G007600 Sobic008G007600 Sobic002G299500--Sobic008G007600 Sobic002G299500--Sobic003G352900 Sobic002G299500--Sobic004G250800 Sobic009G202000 Sobic009G202000 Sobic002G299500--Sobic009G202000 Sobic001G072000 Sobic001G072000 Sobic002G299500--Sobic001G072000 Sobic003G217800--Sobic007G144100 Sobic003G217800--Sobic003G258100 Sobic003G217800--Sobic003G352900 Sobic003G217800--Sobic002G299500 Sobic003G217800--Sobic003G018000 Sobic001G485700 Sobic001G485700 Sobic003G217800--Sobic001G485700 Sobic009G220700 Sobic009G220700 Sobic003G217800--Sobic009G220700 Sobic004G062600 Sobic004G062600 Sobic003G217800--Sobic004G062600 Sobic003G217800--Sobic010G263400 Sobic005G173700 Sobic005G173700 Sobic004G038400--Sobic005G173700 Sobic004G038400--Sobic009G048700 Sobic004G038400--Sobic001G076600 Sobic004G038400--Sobic004G168900 Sobic003G005700 Sobic003G005700 Sobic004G038400--Sobic003G005700 Sobic004G038400--Sobic007G144100 Sobic004G038400--Sobic002G243400 Sobic004G038400--Sobic008G056600 Sobic009G002100 Sobic009G002100 Sobic004G038400--Sobic009G002100 Sobic006G115700 Sobic006G115700 Sobic004G250800--Sobic006G115700 Sobic006G171600 Sobic006G171600 Sobic004G250800--Sobic006G171600 Sobic004G250800--Sobic008G007600 Sobic002G364700 Sobic002G364700 Sobic004G250800--Sobic002G364700 Sobic004G250800--Sobic002G299500 Sobic009G061500 Sobic009G061500 Sobic004G250800--Sobic009G061500 Sobic008G165401 Sobic008G165401 Sobic004G250800--Sobic008G165401 Sobic002G307400 Sobic002G307400 Sobic004G250800--Sobic002G307400 Sobic001G135800 Sobic001G135800 Sobic004G250800--Sobic001G135800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.