Gene annotation
Transcriptome id Sobic.010G013600.1
Synonym Sb10g001360, ATSYP43, SYP43
Functional annotation syntaxin, putative, expressed
UniProt C5Z2V2
Pfam PF05739
Panther DB PTHR19957 PTHR19957:SF108
NCBI CDD KOG0809; SNARE protein TLG2/Syntaxin 16
KEGG Orthology K08489; syntaxin 16
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G05710 : syntaxin of plants 43
RAP-DB (Rice) LOC_Os06g02570.1 : syntaxin, putative, expressed
MaizeGDB (Corn) Zm00025a017591 , Zm00025a022950
Brachypodium KQK19812
Barley HORVU7Hr1G008670.8 , HORVU7Hr1G008670.9 , HORVU7Hr1G008670.6 , HORVU7Hr1G008670.7 , HORVU7Hr1G008670.4 , HORVU7Hr1G008670.5 , HORVU7Hr1G008670.2 , HORVU7Hr1G008670.3 , HORVU7Hr1G008670.1 , HORVU7Hr1G008640.2 , HORVU7Hr1G008640.1 , HORVU7Hr1G008670.10 , HORVU7Hr1G008670.11 , HORVU7Hr1G008670.12
Wheat TraesCS4A02G435000 , TraesCS7A02G049200 , TraesCS7D02G044300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G189000 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
2 Sobic.004G298600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
3 Sobic.001G131900 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
4 Sobic.003G293400 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
5 Sobic.001G076600 hydrolase, acting on carbon-nitrogen, putative, expressed -
6 Sobic.001G380700 bZIP transcription factor family protein, putative, expressed -
7 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
8 Sobic.003G044000 lipase class 3 family protein, putative, expressed -
9 Sobic.001G010500 frigida, putative, expressed -
10 Sobic.010G009700 OsFBX182 - F-box domain containing protein, expressed -
11 Sobic.010G036901 - -
12 Sobic.001G385300 auxin-independent growth promoter protein, putative, expressed -
13 Sobic.002G309100 phosphate-induced protein 1 conserved region domain containing protein, expressed -
14 Sobic.010G255400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
15 Sobic.003G376900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed -
16 Sobic.007G144100 eukaryotic translation initiation factor 3 subunit C, putative, expressed K03252: translation initiation factor 3 subunit C
17 Sobic.002G336400 OsFBLD4 - F-box, LRR and FBD domain containing protein, expressed -
18 Sobic.005G048600 expressed protein -
19 Sobic.010G157200 MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
20 Sobic.001G433600 - -


Gene co-expression network
sample Sobic010G013600 Sobic010G013600 Sobic006G189000 Sobic006G189000 Sobic010G013600--Sobic006G189000 Sobic004G298600 Sobic004G298600 Sobic010G013600--Sobic004G298600 Sobic001G131900 Sobic001G131900 Sobic010G013600--Sobic001G131900 Sobic003G293400 Sobic003G293400 Sobic010G013600--Sobic003G293400 Sobic001G076600 Sobic001G076600 Sobic010G013600--Sobic001G076600 Sobic001G380700 Sobic001G380700 Sobic010G013600--Sobic001G380700 Sobic003G352900 Sobic003G352900 Sobic010G013600--Sobic003G352900 Sobic003G044000 Sobic003G044000 Sobic010G013600--Sobic003G044000 Sobic001G010500 Sobic001G010500 Sobic010G013600--Sobic001G010500 Sobic001G385300 Sobic001G385300 Sobic006G189000--Sobic001G385300 Sobic006G189000--Sobic001G076600 Sobic003G376900 Sobic003G376900 Sobic006G189000--Sobic003G376900 Sobic006G189000--Sobic001G131900 Sobic006G189000--Sobic003G352900 Sobic006G189000--Sobic004G298600 Sobic010G009700 Sobic010G009700 Sobic006G189000--Sobic010G009700 Sobic005G045800 Sobic005G045800 Sobic006G189000--Sobic005G045800 Sobic006G189000--Sobic001G380700 Sobic004G298600--Sobic001G385300 Sobic004G298600--Sobic001G131900 Sobic004G298600--Sobic003G293400 Sobic004G026600 Sobic004G026600 Sobic004G298600--Sobic004G026600 Sobic005G060100 Sobic005G060100 Sobic004G298600--Sobic005G060100 Sobic001G308500 Sobic001G308500 Sobic004G298600--Sobic001G308500 Sobic001G433600 Sobic001G433600 Sobic004G298600--Sobic001G433600 Sobic007G105700 Sobic007G105700 Sobic004G298600--Sobic007G105700 Sobic004G298600--Sobic003G352900 Sobic001G131900--Sobic003G293400 Sobic001G131900--Sobic003G352900 Sobic004G038400 Sobic004G038400 Sobic001G131900--Sobic004G038400 Sobic001G131900--Sobic001G076600 Sobic001G131900--Sobic001G385300 Sobic001G131900--Sobic005G045800 Sobic001G131900--Sobic004G298600 Sobic002G420100 Sobic002G420100 Sobic001G131900--Sobic002G420100 Sobic007G144100 Sobic007G144100 Sobic001G131900--Sobic007G144100 Sobic003G293400--Sobic001G131900 Sobic003G293400--Sobic003G352900 Sobic004G198300 Sobic004G198300 Sobic003G293400--Sobic004G198300 Sobic003G293400--Sobic001G076600 Sobic003G293400--Sobic002G420100 Sobic003G293400--Sobic004G038400 Sobic003G293400--Sobic004G026600 Sobic003G293400--Sobic004G298600 Sobic003G293400--Sobic007G144100 Sobic001G076600--Sobic003G352900 Sobic001G076600--Sobic007G144100 Sobic008G166100 Sobic008G166100 Sobic001G076600--Sobic008G166100 Sobic001G076600--Sobic004G038400 Sobic002G299500 Sobic002G299500 Sobic001G076600--Sobic002G299500 Sobic004G045632 Sobic004G045632 Sobic001G076600--Sobic004G045632 Sobic003G258100 Sobic003G258100 Sobic001G076600--Sobic003G258100 Sobic005G173700 Sobic005G173700 Sobic001G076600--Sobic005G173700 Sobic001G076600--Sobic003G376900 Sobic001G380700--Sobic001G385300 Sobic001G380700--Sobic001G131900 Sobic001G380700--Sobic004G298600 Sobic009G214500 Sobic009G214500 Sobic001G380700--Sobic009G214500 Sobic001G380700--Sobic007G105700 Sobic001G380700--Sobic001G433600 Sobic001G380700--Sobic006G189000 Sobic001G380700--Sobic003G376900 Sobic001G380700--Sobic003G293400 Sobic003G352900--Sobic007G144100 Sobic003G352900--Sobic002G299500 Sobic003G352900--Sobic001G076600 Sobic003G352900--Sobic003G376900 Sobic009G201000 Sobic009G201000 Sobic003G352900--Sobic009G201000 Sobic003G352900--Sobic005G045800 Sobic009G163100 Sobic009G163100 Sobic003G352900--Sobic009G163100 Sobic003G352900--Sobic001G385300 Sobic008G007600 Sobic008G007600 Sobic003G352900--Sobic008G007600 Sobic001G218600 Sobic001G218600 Sobic003G044000--Sobic001G218600 Sobic003G090000 Sobic003G090000 Sobic003G044000--Sobic003G090000 Sobic003G027000 Sobic003G027000 Sobic003G044000--Sobic003G027000 Sobic001G506400 Sobic001G506400 Sobic003G044000--Sobic001G506400 Sobic003G044000--Sobic001G131900 Sobic003G396500 Sobic003G396500 Sobic003G044000--Sobic003G396500 Sobic009G066600 Sobic009G066600 Sobic003G044000--Sobic009G066600 Sobic004G313400 Sobic004G313400 Sobic003G044000--Sobic004G313400 Sobic003G044000--Sobic003G293400 Sobic009G163400 Sobic009G163400 Sobic001G010500--Sobic009G163400 Sobic002G309100 Sobic002G309100 Sobic001G010500--Sobic002G309100 Sobic001G376501 Sobic001G376501 Sobic001G010500--Sobic001G376501 Sobic008G141900 Sobic008G141900 Sobic001G010500--Sobic008G141900 Sobic001G257650 Sobic001G257650 Sobic001G010500--Sobic001G257650 Sobic003G009000 Sobic003G009000 Sobic001G010500--Sobic003G009000 Sobic001G130600 Sobic001G130600 Sobic001G010500--Sobic001G130600 Sobic008G121501 Sobic008G121501 Sobic001G010500--Sobic008G121501 Sobic003G005500 Sobic003G005500 Sobic001G010500--Sobic003G005500
Octagon: transcription factors


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