Gene annotation
Transcriptome id Sobic.008G027700.1
Synonym Sb08g002430
Functional annotation RALFL23 - Rapid ALkalinization Factor RALF family protein precursor, expressed
UniProt C5YR91
Pfam -
Panther DB PTHR34998 PTHR34998:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os11g26190.1 : RALFL23 - Rapid ALkalinization Factor RALF family protein precursor, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G263700 expressed protein -
2 Sobic.003G300900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
3 Sobic.003G340100 "domain confirmed by Pfam database, expressed in leaf, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
4 Sobic.001G431100 Plantacyanin(PubMedID : 23915383)@plastocyanin-like domain containing protein, putative, expressed -
5 Sobic.010G144900 fiber protein Fb34, putative, expressed -
6 Sobic.003G128900 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.006G200000 RNA recognition motif, putative, expressed -
8 Sobic.009G189200 secretory carrier-associated membrane protein, putative, expressed -
9 Sobic.003G072900 OsRhmbd18 - Putative Rhomboid homologue, expressed -
10 Sobic.001G261400 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
11 Sobic.002G186900 enolase, putative, expressed K01689: ENO, enolase
12 Sobic.003G396600 down-regulated TF in developmental senescence(PubMedID : 27586543)@ZOS5-12 - C2H2 zinc finger protein, expressed -
13 Sobic.002G057500 C-Myc-binding protein, putative, expressed -
14 Sobic.008G141200 DUF1336 domain containing protein, expressed -
15 Sobic.001G434300 expressed protein -
16 Sobic.001G410200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@OsAPx1 - Cytosolic Ascorbate Peroxidase encoding gene 1-8, expressed K00434: L-ascorbate peroxidase
17 Sobic.010G138300 DUF617 domain containing protein, expressed -
18 Sobic.009G088200 -(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
19 Sobic.001G260701 -(PubMedID : 26976818) -
20 Sobic.001G078700 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic008G027700 Sobic008G027700 Sobic004G263700 Sobic004G263700 Sobic008G027700--Sobic004G263700 Sobic003G300900 Sobic003G300900 Sobic008G027700--Sobic003G300900 Sobic003G340100 Sobic003G340100 Sobic008G027700--Sobic003G340100 Sobic001G431100 Sobic001G431100 Sobic008G027700--Sobic001G431100 Sobic010G144900 Sobic010G144900 Sobic008G027700--Sobic010G144900 Sobic003G128900 Sobic003G128900 Sobic008G027700--Sobic003G128900 Sobic006G200000 Sobic006G200000 Sobic008G027700--Sobic006G200000 Sobic009G189200 Sobic009G189200 Sobic008G027700--Sobic009G189200 Sobic003G072900 Sobic003G072900 Sobic008G027700--Sobic003G072900 Sobic001G260701 Sobic001G260701 Sobic004G263700--Sobic001G260701 Sobic001G261400 Sobic001G261400 Sobic004G263700--Sobic001G261400 Sobic002G218600 Sobic002G218600 Sobic004G263700--Sobic002G218600 Sobic004G233700 Sobic004G233700 Sobic004G263700--Sobic004G233700 Sobic001G304800 Sobic001G304800 Sobic004G263700--Sobic001G304800 Sobic007G113300 Sobic007G113300 Sobic004G263700--Sobic007G113300 Sobic002G230900 Sobic002G230900 Sobic004G263700--Sobic002G230900 Sobic006G073800 Sobic006G073800 Sobic004G263700--Sobic006G073800 Sobic004G029450 Sobic004G029450 Sobic004G263700--Sobic004G029450 Sobic008G170500 Sobic008G170500 Sobic003G300900--Sobic008G170500 Sobic010G190300 Sobic010G190300 Sobic003G300900--Sobic010G190300 Sobic008G135500 Sobic008G135500 Sobic003G300900--Sobic008G135500 Sobic003G128700 Sobic003G128700 Sobic003G300900--Sobic003G128700 Sobic001G410200 Sobic001G410200 Sobic003G300900--Sobic001G410200 Sobic003G300900--Sobic006G200000 Sobic001G397000 Sobic001G397000 Sobic003G300900--Sobic001G397000 Sobic006G245500 Sobic006G245500 Sobic003G300900--Sobic006G245500 Sobic010G090100 Sobic010G090100 Sobic003G300900--Sobic010G090100 Sobic010G138300 Sobic010G138300 Sobic003G340100--Sobic010G138300 Sobic006G227500 Sobic006G227500 Sobic003G340100--Sobic006G227500 Sobic009G221500 Sobic009G221500 Sobic003G340100--Sobic009G221500 Sobic001G430100 Sobic001G430100 Sobic003G340100--Sobic001G430100 Sobic007G050200 Sobic007G050200 Sobic003G340100--Sobic007G050200 Sobic003G340100--Sobic010G190300 Sobic008G102800 Sobic008G102800 Sobic003G340100--Sobic008G102800 Sobic002G154600 Sobic002G154600 Sobic003G340100--Sobic002G154600 Sobic003G340100--Sobic003G300900 Sobic010G232500 Sobic010G232500 Sobic001G431100--Sobic010G232500 Sobic003G180400 Sobic003G180400 Sobic001G431100--Sobic003G180400 Sobic001G431100--Sobic008G027700 Sobic009G048000 Sobic009G048000 Sobic001G431100--Sobic009G048000 Sobic002G167600 Sobic002G167600 Sobic001G431100--Sobic002G167600 Sobic006G144600 Sobic006G144600 Sobic001G431100--Sobic006G144600 Sobic008G141200 Sobic008G141200 Sobic001G431100--Sobic008G141200 Sobic009G034300 Sobic009G034300 Sobic001G431100--Sobic009G034300 Sobic001G431100--Sobic001G261400 Sobic010G144900--Sobic009G189200 Sobic006G104100 Sobic006G104100 Sobic010G144900--Sobic006G104100 Sobic010G144900--Sobic001G397000 Sobic006G120700 Sobic006G120700 Sobic010G144900--Sobic006G120700 Sobic009G059500 Sobic009G059500 Sobic010G144900--Sobic009G059500 Sobic002G186900 Sobic002G186900 Sobic010G144900--Sobic002G186900 Sobic007G044400 Sobic007G044400 Sobic010G144900--Sobic007G044400 Sobic002G236700 Sobic002G236700 Sobic010G144900--Sobic002G236700 Sobic001G371100 Sobic001G371100 Sobic010G144900--Sobic001G371100 Sobic003G052900 Sobic003G052900 Sobic003G128900--Sobic003G052900 Sobic002G374650 Sobic002G374650 Sobic003G128900--Sobic002G374650 Sobic001G295800 Sobic001G295800 Sobic003G128900--Sobic001G295800 Sobic008G099100 Sobic008G099100 Sobic003G128900--Sobic008G099100 Sobic007G165400 Sobic007G165400 Sobic003G128900--Sobic007G165400 Sobic003G128900--Sobic008G027700 Sobic001G476300 Sobic001G476300 Sobic003G128900--Sobic001G476300 Sobic008G034700 Sobic008G034700 Sobic003G128900--Sobic008G034700 Sobic010G131400 Sobic010G131400 Sobic003G128900--Sobic010G131400 Sobic006G200000--Sobic006G120700 Sobic005G080900 Sobic005G080900 Sobic006G200000--Sobic005G080900 Sobic003G396600 Sobic003G396600 Sobic006G200000--Sobic003G396600 Sobic010G265900 Sobic010G265900 Sobic006G200000--Sobic010G265900 Sobic003G034600 Sobic003G034600 Sobic006G200000--Sobic003G034600 Sobic010G115200 Sobic010G115200 Sobic006G200000--Sobic010G115200 Sobic006G083000 Sobic006G083000 Sobic006G200000--Sobic006G083000 Sobic006G200000--Sobic003G300900 Sobic006G200000--Sobic001G410200 Sobic006G102900 Sobic006G102900 Sobic009G189200--Sobic006G102900 Sobic001G261549 Sobic001G261549 Sobic009G189200--Sobic001G261549 Sobic002G057500 Sobic002G057500 Sobic009G189200--Sobic002G057500 Sobic009G189200--Sobic010G144900 Sobic009G189200--Sobic007G044400 Sobic004G285900 Sobic004G285900 Sobic009G189200--Sobic004G285900 Sobic003G084300 Sobic003G084300 Sobic009G189200--Sobic003G084300 Sobic003G122200 Sobic003G122200 Sobic009G189200--Sobic003G122200 Sobic001G131600 Sobic001G131600 Sobic009G189200--Sobic001G131600 Sobic003G072900--Sobic009G189200 Sobic003G072900--Sobic002G236700 Sobic003G072900--Sobic010G144900 Sobic001G336050 Sobic001G336050 Sobic003G072900--Sobic001G336050 Sobic003G072900--Sobic006G120700 Sobic003G072900--Sobic003G122200 Sobic003G072900--Sobic003G396600 Sobic003G072900--Sobic003G084300 Sobic009G111400 Sobic009G111400 Sobic003G072900--Sobic009G111400
Octagon: transcription factors


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