Gene annotation
Transcriptome id Sobic.001G431100.1,Sobic.001G431100.2
Synonym ARPN, Sb01g040540
Functional annotation Plantacyanin (PubMedID : 23915383)
plastocyanin-like domain containing protein, putative, expressed
UniProt C5WQS6
Pfam PF02298
Panther DB PTHR33021 PTHR33021:SF39
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009055; electron transfer activity


Orthologs (automatic annotation)
TAIR AT2G02850 : plantacyanin
RAP-DB (Rice) LOC_Os03g15340.1 : plastocyanin-like domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a001676
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G431100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G232500 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.003G180400 "domain confirmed by Pfam database, expressed in leaf, flower and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
3 Sobic.008G027700 RALFL23 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
4 Sobic.009G048000 villin, putative, expressed K08017: advillin
5 Sobic.002G167600 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
6 Sobic.006G144600 ARPC2B, putative, expressed K05758: actin related protein 2/3 complex, subunit 2
7 Sobic.008G141200 DUF1336 domain containing protein, expressed -
8 Sobic.009G034300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
9 Sobic.001G261400 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
10 Sobic.010G131400 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
11 Sobic.002G203900 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
12 Sobic.001G360800 cytochrome P450, putative, expressed K13083: flavonoid 3',5'-hydroxylase
13 Sobic.001G406700 expressed protein -
14 Sobic.005G229100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
15 Sobic.010G180100 transferase family protein, putative, expressed -
16 Sobic.006G226200 kinesin motor domain containing protein, putative, expressed K10405: kinesin family member C1
17 Sobic.004G263700 expressed protein -
18 Sobic.001G399200 kinesin motor domain containing protein, expressed K10406: kinesin family member C2/C3
19 Sobic.003G387500 IQ calmodulin-binding motif domain containing protein, expressed -
20 Sobic.002G343100 protein kinase, putative, expressed -


Gene co-expression network
sample Sobic001G431100 Sobic001G431100 Sobic010G232500 Sobic010G232500 Sobic001G431100--Sobic010G232500 Sobic003G180400 Sobic003G180400 Sobic001G431100--Sobic003G180400 Sobic008G027700 Sobic008G027700 Sobic001G431100--Sobic008G027700 Sobic009G048000 Sobic009G048000 Sobic001G431100--Sobic009G048000 Sobic002G167600 Sobic002G167600 Sobic001G431100--Sobic002G167600 Sobic006G144600 Sobic006G144600 Sobic001G431100--Sobic006G144600 Sobic008G141200 Sobic008G141200 Sobic001G431100--Sobic008G141200 Sobic009G034300 Sobic009G034300 Sobic001G431100--Sobic009G034300 Sobic001G261400 Sobic001G261400 Sobic001G431100--Sobic001G261400 Sobic010G232500--Sobic006G144600 Sobic001G406700 Sobic001G406700 Sobic010G232500--Sobic001G406700 Sobic005G229100 Sobic005G229100 Sobic010G232500--Sobic005G229100 Sobic003G387500 Sobic003G387500 Sobic010G232500--Sobic003G387500 Sobic006G226200 Sobic006G226200 Sobic010G232500--Sobic006G226200 Sobic010G232500--Sobic002G167600 Sobic001G399200 Sobic001G399200 Sobic010G232500--Sobic001G399200 Sobic003G231500 Sobic003G231500 Sobic010G232500--Sobic003G231500 Sobic007G223600 Sobic007G223600 Sobic010G232500--Sobic007G223600 Sobic003G180400--Sobic010G232500 Sobic003G180400--Sobic001G406700 Sobic009G170500 Sobic009G170500 Sobic003G180400--Sobic009G170500 Sobic003G180400--Sobic006G144600 Sobic003G180400--Sobic001G399200 Sobic003G180400--Sobic001G431100 Sobic003G180400--Sobic002G167600 Sobic003G180400--Sobic003G387500 Sobic003G180400--Sobic005G229100 Sobic004G263700 Sobic004G263700 Sobic008G027700--Sobic004G263700 Sobic003G300900 Sobic003G300900 Sobic008G027700--Sobic003G300900 Sobic003G340100 Sobic003G340100 Sobic008G027700--Sobic003G340100 Sobic008G027700--Sobic001G431100 Sobic010G144900 Sobic010G144900 Sobic008G027700--Sobic010G144900 Sobic003G128900 Sobic003G128900 Sobic008G027700--Sobic003G128900 Sobic006G200000 Sobic006G200000 Sobic008G027700--Sobic006G200000 Sobic009G189200 Sobic009G189200 Sobic008G027700--Sobic009G189200 Sobic003G072900 Sobic003G072900 Sobic008G027700--Sobic003G072900 Sobic009G048000--Sobic006G226200 Sobic003G296400 Sobic003G296400 Sobic009G048000--Sobic003G296400 Sobic002G205500 Sobic002G205500 Sobic009G048000--Sobic002G205500 Sobic003G236701 Sobic003G236701 Sobic009G048000--Sobic003G236701 Sobic001G468300 Sobic001G468300 Sobic009G048000--Sobic001G468300 Sobic009G226900 Sobic009G226900 Sobic009G048000--Sobic009G226900 Sobic001G224300 Sobic001G224300 Sobic009G048000--Sobic001G224300 Sobic003G112200 Sobic003G112200 Sobic009G048000--Sobic003G112200 Sobic009G048000--Sobic007G223600 Sobic001G360700 Sobic001G360700 Sobic002G167600--Sobic001G360700 Sobic002G167600--Sobic006G144600 Sobic004G047600 Sobic004G047600 Sobic002G167600--Sobic004G047600 Sobic002G167600--Sobic001G406700 Sobic002G203900 Sobic002G203900 Sobic002G167600--Sobic002G203900 Sobic002G167600--Sobic009G170500 Sobic002G254900 Sobic002G254900 Sobic002G167600--Sobic002G254900 Sobic001G072600 Sobic001G072600 Sobic002G167600--Sobic001G072600 Sobic010G180100 Sobic010G180100 Sobic002G167600--Sobic010G180100 Sobic006G144600--Sobic001G406700 Sobic006G144600--Sobic010G232500 Sobic006G144600--Sobic003G387500 Sobic006G144600--Sobic002G167600 Sobic006G144600--Sobic009G170500 Sobic006G144600--Sobic001G399200 Sobic006G144600--Sobic005G229100 Sobic007G119500 Sobic007G119500 Sobic006G144600--Sobic007G119500 Sobic006G144600--Sobic007G223600 Sobic003G135400 Sobic003G135400 Sobic008G141200--Sobic003G135400 Sobic009G206500 Sobic009G206500 Sobic008G141200--Sobic009G206500 Sobic003G420100 Sobic003G420100 Sobic008G141200--Sobic003G420100 Sobic009G059500 Sobic009G059500 Sobic008G141200--Sobic009G059500 Sobic003G247600 Sobic003G247600 Sobic008G141200--Sobic003G247600 Sobic010G131400 Sobic010G131400 Sobic008G141200--Sobic010G131400 Sobic008G141200--Sobic009G189200 Sobic009G214100 Sobic009G214100 Sobic008G141200--Sobic009G214100 Sobic004G066900 Sobic004G066900 Sobic008G141200--Sobic004G066900 Sobic001G360800 Sobic001G360800 Sobic009G034300--Sobic001G360800 Sobic004G221300 Sobic004G221300 Sobic009G034300--Sobic004G221300 Sobic009G034300--Sobic001G224300 Sobic003G410800 Sobic003G410800 Sobic009G034300--Sobic003G410800 Sobic009G034300--Sobic002G203900 Sobic006G036400 Sobic006G036400 Sobic009G034300--Sobic006G036400 Sobic009G034300--Sobic002G167600 Sobic001G409100 Sobic001G409100 Sobic009G034300--Sobic001G409100 Sobic009G034300--Sobic010G180100 Sobic010G134900 Sobic010G134900 Sobic001G261400--Sobic010G134900 Sobic004G214300 Sobic004G214300 Sobic001G261400--Sobic004G214300 Sobic009G102400 Sobic009G102400 Sobic001G261400--Sobic009G102400 Sobic001G261400--Sobic004G263700 Sobic002G230900 Sobic002G230900 Sobic001G261400--Sobic002G230900 Sobic006G124200 Sobic006G124200 Sobic001G261400--Sobic006G124200 Sobic002G218600 Sobic002G218600 Sobic001G261400--Sobic002G218600 Sobic010G177300 Sobic010G177300 Sobic001G261400--Sobic010G177300 Sobic010G155100 Sobic010G155100 Sobic001G261400--Sobic010G155100
Octagon: transcription factors


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