Gene annotation
Transcriptome id Sobic.009G113900.1,Sobic.009G113900.2
Synonym Sb09g018170
Functional annotation expressed protein
UniProt C5YWW1
Pfam -
Panther DB PTHR34057 PTHR34057:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G59670 : -
RAP-DB (Rice) LOC_Os05g30340.1 : expressed protein
MaizeGDB (Corn) Zm00025a043346
Brachypodium KQK06669 , KQK06674 , KQK06670 , KQK06671 , KQK06672 , KQK06673
Barley HORVU1Hr1G058540.9 , HORVU1Hr1G058540.8 , HORVU1Hr1G058540.3 , HORVU1Hr1G058540.2 , HORVU1Hr1G058540.1 , HORVU1Hr1G058540.7 , HORVU1Hr1G058540.6 , HORVU1Hr1G058540.5 , HORVU1Hr1G058540.4 , HORVU1Hr1G058540.18 , HORVU1Hr1G058540.13 , HORVU1Hr1G058540.12 , HORVU1Hr1G058540.11 , HORVU1Hr1G058540.17 , HORVU1Hr1G058540.16 , HORVU1Hr1G058540.15 , HORVU1Hr1G058540.14
Wheat TraesCS1A02G229400 , TraesCS1A02G229400 , TraesCS1B02G244700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G068800 TOPBP1A - Similar to DNA replication protein TOPBP1 from, expressed K10728: topoisomerase (DNA) II binding protein 1
2 Sobic.001G460100 heparanase-like protein precursor, putative, expressed K07964: heparanase
3 Sobic.001G199500 heat shock protein DnaJ, putative, expressed K09531: DnaJ homolog subfamily C member 11
4 Sobic.001G507000 expressed protein -
5 Sobic.005G088900 AGAP007117-PA, putative, expressed -
6 Sobic.002G215200 lung seven transmembrane domain containing protein, putative, expressed -
7 Sobic.006G281900 down-regulated TF in developmental senescence(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
8 Sobic.006G051000 POLA3 - Putative DNA polymerase alpha complex subunit, expressed K02685: DNA primase large subunit
9 Sobic.001G122100 protein kinase family protein, putative, expressed K08866: TTK, serine/threonine-protein kinase TTK/MPS1
10 Sobic.006G195500 DNA-binding protein, putative, expressed K10742: DNA replication ATP-dependent helicase Dna2
11 Sobic.003G102700 exostosin family protein, putative, expressed -
12 Sobic.004G330600 GHMP kinases ATP-binding protein, putative, expressed K01597: MVD, diphosphomevalonate decarboxylase
13 Sobic.009G188900 acyltransferase, putative, expressed K13513: LCLAT1, lysocardiolipin and lysophospholipid acyltransferase
14 Sobic.002G303800 expressed protein -
15 Sobic.003G183700 MCM4 - Putative minichromosome maintenance MCM complex subunit 4, expressed K02212: MCM4, DNA replication licensing factor MCM4
16 Sobic.008G118100 kelch repeat protein, putative, expressed -
17 Sobic.002G168000 expressed protein -
18 Sobic.010G252700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cullin family domain containing protein, putative, expressed K03349: anaphase-promoting complex subunit 2
19 Sobic.010G021900 rad1, putative, expressed K02830: HRAD1, cell cycle checkpoint protein
20 Sobic.010G169700 pollen-specific protein SF21, putative, expressed -


Gene co-expression network
sample Sobic009G113900 Sobic009G113900 Sobic005G068800 Sobic005G068800 Sobic009G113900--Sobic005G068800 Sobic001G460100 Sobic001G460100 Sobic009G113900--Sobic001G460100 Sobic001G199500 Sobic001G199500 Sobic009G113900--Sobic001G199500 Sobic001G507000 Sobic001G507000 Sobic009G113900--Sobic001G507000 Sobic005G088900 Sobic005G088900 Sobic009G113900--Sobic005G088900 Sobic002G215200 Sobic002G215200 Sobic009G113900--Sobic002G215200 Sobic006G281900 Sobic006G281900 Sobic009G113900--Sobic006G281900 Sobic006G051000 Sobic006G051000 Sobic009G113900--Sobic006G051000 Sobic001G122100 Sobic001G122100 Sobic009G113900--Sobic001G122100 Sobic005G068800--Sobic001G507000 Sobic004G156200 Sobic004G156200 Sobic005G068800--Sobic004G156200 Sobic004G095200 Sobic004G095200 Sobic005G068800--Sobic004G095200 Sobic006G120600 Sobic006G120600 Sobic005G068800--Sobic006G120600 Sobic009G146250 Sobic009G146250 Sobic005G068800--Sobic009G146250 Sobic006G195500 Sobic006G195500 Sobic005G068800--Sobic006G195500 Sobic003G183700 Sobic003G183700 Sobic005G068800--Sobic003G183700 Sobic002G021200 Sobic002G021200 Sobic005G068800--Sobic002G021200 Sobic009G052100 Sobic009G052100 Sobic005G068800--Sobic009G052100 Sobic010G177100 Sobic010G177100 Sobic001G460100--Sobic010G177100 Sobic009G188900 Sobic009G188900 Sobic001G460100--Sobic009G188900 Sobic001G460100--Sobic009G113900 Sobic003G084200 Sobic003G084200 Sobic001G460100--Sobic003G084200 Sobic009G012600 Sobic009G012600 Sobic001G460100--Sobic009G012600 Sobic003G024000 Sobic003G024000 Sobic001G460100--Sobic003G024000 Sobic007G050800 Sobic007G050800 Sobic001G460100--Sobic007G050800 Sobic006G275500 Sobic006G275500 Sobic001G460100--Sobic006G275500 Sobic003G102700 Sobic003G102700 Sobic001G460100--Sobic003G102700 Sobic001G199500--Sobic005G088900 Sobic001G199500--Sobic003G102700 Sobic006G084300 Sobic006G084300 Sobic001G199500--Sobic006G084300 Sobic001G199500--Sobic003G024000 Sobic001G199500--Sobic006G281900 Sobic001G199500--Sobic009G188900 Sobic007G006800 Sobic007G006800 Sobic001G199500--Sobic007G006800 Sobic006G071628 Sobic006G071628 Sobic001G199500--Sobic006G071628 Sobic003G144000 Sobic003G144000 Sobic001G199500--Sobic003G144000 Sobic001G507000--Sobic005G068800 Sobic004G321400 Sobic004G321400 Sobic001G507000--Sobic004G321400 Sobic001G507000--Sobic003G183700 Sobic001G146900 Sobic001G146900 Sobic001G507000--Sobic001G146900 Sobic001G507000--Sobic006G120600 Sobic001G507000--Sobic004G156200 Sobic001G507000--Sobic006G195500 Sobic001G507000--Sobic004G095200 Sobic009G087000 Sobic009G087000 Sobic001G507000--Sobic009G087000 Sobic005G088900--Sobic001G199500 Sobic009G191500 Sobic009G191500 Sobic005G088900--Sobic009G191500 Sobic009G176300 Sobic009G176300 Sobic005G088900--Sobic009G176300 Sobic004G215900 Sobic004G215900 Sobic005G088900--Sobic004G215900 Sobic008G068100 Sobic008G068100 Sobic005G088900--Sobic008G068100 Sobic003G432300 Sobic003G432300 Sobic005G088900--Sobic003G432300 Sobic005G088900--Sobic003G144000 Sobic002G133000 Sobic002G133000 Sobic005G088900--Sobic002G133000 Sobic002G003300 Sobic002G003300 Sobic005G088900--Sobic002G003300 Sobic003G289800 Sobic003G289800 Sobic002G215200--Sobic003G289800 Sobic002G215200--Sobic003G183700 Sobic002G215200--Sobic006G051000 Sobic003G369200 Sobic003G369200 Sobic002G215200--Sobic003G369200 Sobic002G215200--Sobic009G087000 Sobic004G243900 Sobic004G243900 Sobic002G215200--Sobic004G243900 Sobic003G201000 Sobic003G201000 Sobic002G215200--Sobic003G201000 Sobic002G215200--Sobic006G195500 Sobic003G318900 Sobic003G318900 Sobic002G215200--Sobic003G318900 Sobic002G168000 Sobic002G168000 Sobic006G281900--Sobic002G168000 Sobic006G281900--Sobic002G021200 Sobic006G281900--Sobic009G188900 Sobic001G290500 Sobic001G290500 Sobic006G281900--Sobic001G290500 Sobic006G281900--Sobic001G199500 Sobic001G425700 Sobic001G425700 Sobic006G281900--Sobic001G425700 Sobic009G225500 Sobic009G225500 Sobic006G281900--Sobic009G225500 Sobic007G187700 Sobic007G187700 Sobic006G281900--Sobic007G187700 Sobic006G281900--Sobic003G024000 Sobic006G051000--Sobic003G183700 Sobic006G051000--Sobic006G195500 Sobic010G103700 Sobic010G103700 Sobic006G051000--Sobic010G103700 Sobic006G196600 Sobic006G196600 Sobic006G051000--Sobic006G196600 Sobic003G179500 Sobic003G179500 Sobic006G051000--Sobic003G179500 Sobic006G051000--Sobic009G087000 Sobic009G109300 Sobic009G109300 Sobic006G051000--Sobic009G109300 Sobic008G129200 Sobic008G129200 Sobic006G051000--Sobic008G129200 Sobic005G110535 Sobic005G110535 Sobic006G051000--Sobic005G110535 Sobic002G303800 Sobic002G303800 Sobic001G122100--Sobic002G303800 Sobic009G087300 Sobic009G087300 Sobic001G122100--Sobic009G087300 Sobic006G281400 Sobic006G281400 Sobic001G122100--Sobic006G281400 Sobic001G122100--Sobic003G369200 Sobic001G122100--Sobic002G021200 Sobic003G444300 Sobic003G444300 Sobic001G122100--Sobic003G444300 Sobic001G122100--Sobic009G052100 Sobic010G105400 Sobic010G105400 Sobic001G122100--Sobic010G105400 Sobic010G252700 Sobic010G252700 Sobic001G122100--Sobic010G252700
Octagon: transcription factors


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