Gene annotation
Transcriptome id Sobic.006G144300.2,Sobic.006G144300.3,Sobic.006G144300.4
Synonym Sb06g022313
Functional annotation expressed protein
UniProt A0A1Z5RE16 , A0A1Z5RED5 , A0A1Z5RDY4
Pfam -
Panther DB PTHR33318 PTHR33318:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G44040 : -
RAP-DB (Rice) LOC_Os04g43230.1,LOC_Os04g43230.2 : expressed protein
MaizeGDB (Corn) Zm00025a010675
Brachypodium -
Barley HORVU2Hr1G088900.18 , HORVU2Hr1G088900.11 , HORVU2Hr1G088900.10 , HORVU2Hr1G088900.12 , HORVU2Hr1G088900.14 , HORVU2Hr1G088900.17 , HORVU2Hr1G088900.16 , HORVU2Hr1G088900.9 , HORVU2Hr1G088900.8 , HORVU2Hr1G088900.4 , HORVU2Hr1G088900.6 , HORVU2Hr1G088900.3 , HORVU2Hr1G088900.2 , HORVU2Hr1G088900.1
Wheat TraesCS2D02G382000 , TraesCS2D02G382000 , TraesCS2D02G382000 , TraesCS2D02G382000 , TraesCS2A02G385300 , TraesCS2A02G385300 , TraesCS2A02G385300 , TraesCS2B02G402200 , TraesCS2B02G402200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G294500 dynamin family protein, putative, expressed -
2 Sobic.005G144600 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
3 Sobic.007G168900 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
4 Sobic.001G177900 Kinesin motor domain domain containing protein, expressed K10400: kinesin family member 15
5 Sobic.003G314900 flap endonuclease, putative, expressed K10746: exonuclease 1
6 Sobic.003G260700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
7 Sobic.004G257600 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
8 Sobic.005G000500 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
9 Sobic.004G271300 DNA topoisomerase 2, putative, expressed K03164: DNA topoisomerase II
10 Sobic.001G029800 expressed protein -
11 Sobic.010G274000 cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
12 Sobic.010G008900 kinesin motor domain containing protein, expressed K11498: centromeric protein E
13 Sobic.002G426800 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.003G013000 inactive receptor kinase At2g26730 precursor, putative, expressed -
15 Sobic.004G339500 kinesin motor domain containing protein, putative, expressed -
16 Sobic.003G328500 Expressed in younger stem(PubMedID : 28649278)@cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
17 Sobic.009G181500 Up-reguralion under heat(PubMedID : 24916767)@cyclin, putative, expressed -
18 Sobic.003G444100 "OsCCS52B(Ortholog in rice:Su’udi et al., 2012)"(PubMedID : 31659875)@WD repeat-containing protein, putative, expressed K03364: cell division cycle 20-like protein 1, cofactor of APC complex
19 Sobic.005G005700 inactive receptor kinase At2g26730 precursor, putative, expressed -
20 Sobic.004G197400 expressed protein K00558: DNMT1, DNA (cytosine-5)-methyltransferase 1


Gene co-expression network
sample Sobic006G144300 Sobic006G144300 Sobic003G294500 Sobic003G294500 Sobic006G144300--Sobic003G294500 Sobic005G144600 Sobic005G144600 Sobic006G144300--Sobic005G144600 Sobic007G168900 Sobic007G168900 Sobic006G144300--Sobic007G168900 Sobic001G177900 Sobic001G177900 Sobic006G144300--Sobic001G177900 Sobic003G314900 Sobic003G314900 Sobic006G144300--Sobic003G314900 Sobic003G260700 Sobic003G260700 Sobic006G144300--Sobic003G260700 Sobic004G257600 Sobic004G257600 Sobic006G144300--Sobic004G257600 Sobic005G000500 Sobic005G000500 Sobic006G144300--Sobic005G000500 Sobic004G271300 Sobic004G271300 Sobic006G144300--Sobic004G271300 Sobic003G294500--Sobic005G144600 Sobic003G294500--Sobic007G168900 Sobic003G294500--Sobic003G314900 Sobic003G294500--Sobic001G177900 Sobic003G294500--Sobic005G000500 Sobic003G294500--Sobic006G144300 Sobic010G008900 Sobic010G008900 Sobic003G294500--Sobic010G008900 Sobic001G029800 Sobic001G029800 Sobic003G294500--Sobic001G029800 Sobic010G147700 Sobic010G147700 Sobic003G294500--Sobic010G147700 Sobic005G144600--Sobic007G168900 Sobic010G105400 Sobic010G105400 Sobic005G144600--Sobic010G105400 Sobic005G144600--Sobic003G294500 Sobic005G144600--Sobic005G000500 Sobic005G144600--Sobic003G314900 Sobic005G144600--Sobic001G177900 Sobic004G047100 Sobic004G047100 Sobic005G144600--Sobic004G047100 Sobic005G144600--Sobic004G271300 Sobic003G179500 Sobic003G179500 Sobic005G144600--Sobic003G179500 Sobic007G168900--Sobic005G000500 Sobic007G168900--Sobic005G144600 Sobic007G168900--Sobic004G271300 Sobic007G168900--Sobic001G177900 Sobic007G168900--Sobic003G314900 Sobic007G168900--Sobic003G294500 Sobic007G168900--Sobic003G260700 Sobic007G168900--Sobic010G008900 Sobic007G168900--Sobic010G147700 Sobic001G177900--Sobic007G168900 Sobic001G177900--Sobic003G314900 Sobic001G177900--Sobic005G000500 Sobic001G177900--Sobic003G260700 Sobic001G170800 Sobic001G170800 Sobic001G177900--Sobic001G170800 Sobic001G177900--Sobic010G008900 Sobic004G339500 Sobic004G339500 Sobic001G177900--Sobic004G339500 Sobic001G177900--Sobic005G144600 Sobic001G177900--Sobic003G294500 Sobic003G314900--Sobic005G000500 Sobic003G314900--Sobic007G168900 Sobic003G314900--Sobic001G177900 Sobic003G314900--Sobic010G008900 Sobic003G314900--Sobic005G144600 Sobic003G314900--Sobic003G294500 Sobic003G314900--Sobic003G260700 Sobic003G314900--Sobic001G170800 Sobic003G314900--Sobic004G271300 Sobic003G260700--Sobic001G170800 Sobic003G260700--Sobic004G257600 Sobic003G260700--Sobic004G339500 Sobic001G398400 Sobic001G398400 Sobic003G260700--Sobic001G398400 Sobic004G198100 Sobic004G198100 Sobic003G260700--Sobic004G198100 Sobic003G260700--Sobic004G271300 Sobic008G006800 Sobic008G006800 Sobic003G260700--Sobic008G006800 Sobic003G260700--Sobic001G177900 Sobic002G313000 Sobic002G313000 Sobic003G260700--Sobic002G313000 Sobic004G257600--Sobic003G260700 Sobic003G387700 Sobic003G387700 Sobic004G257600--Sobic003G387700 Sobic004G257600--Sobic001G398400 Sobic004G257600--Sobic001G177900 Sobic004G257600--Sobic004G198100 Sobic004G257600--Sobic001G170800 Sobic003G444100 Sobic003G444100 Sobic004G257600--Sobic003G444100 Sobic004G257600--Sobic007G168900 Sobic004G257600--Sobic004G339500 Sobic005G000500--Sobic007G168900 Sobic005G000500--Sobic001G170800 Sobic008G148000 Sobic008G148000 Sobic005G000500--Sobic008G148000 Sobic005G000500--Sobic003G444100 Sobic005G000500--Sobic003G314900 Sobic005G000500--Sobic004G271300 Sobic005G000500--Sobic005G144600 Sobic005G000500--Sobic010G008900 Sobic005G000500--Sobic001G177900 Sobic004G271300--Sobic007G168900 Sobic004G271300--Sobic005G000500 Sobic004G271300--Sobic003G260700 Sobic004G271300--Sobic001G170800 Sobic005G005700 Sobic005G005700 Sobic004G271300--Sobic005G005700 Sobic004G271300--Sobic001G398400 Sobic004G271300--Sobic008G006800 Sobic004G271300--Sobic001G177900 Sobic004G271300--Sobic005G144600
Octagon: transcription factors


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