Gene annotation
Transcriptome id Sobic.001G515900.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QQQ3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g42230.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G071300 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.010G077275 - -
3 Sobic.010G174600 Leucine rich repeat N-terminal domain containing protein, putative, expressed -
4 Sobic.003G418600 6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed -
5 Sobic.001G146450 - -
6 Sobic.007G084900 - -
7 Sobic.001G352100 serine/threonine-protein kinase BRI1-like 1 precursor, putative, expressed -
8 Sobic.006G176300 OsSub44 - Putative Subtilisin homologue, expressed -
9 Sobic.001G371500 - -
10 Sobic.003G137832 - -
11 Sobic.007G054300 harpin-induced protein 1 domain containing protein, expressed -
12 Sobic.010G090550 - -
13 Sobic.001G338200 RNA-directed DNA polymerase, putative, expressed -
14 Sobic.003G089400 seven in absentia protein family protein, putative, expressed K04506: E3 ubiquitin-protein ligase SIAH1
15 Sobic.002G258200 OsFBX307 - F-box domain containing protein, expressed -
16 Sobic.001G018700 RD26, putative, expressed -
17 Sobic.001G018700 RD26, putative, expressed -
18 Sobic.001G018700 RD26, putative, expressed -
19 Sobic.001G018700 RD26, putative, expressed -
20 Sobic.001G018700 RD26, putative, expressed -


Gene co-expression network
sample Sobic001G515900 Sobic001G515900 Sobic004G071300 Sobic004G071300 Sobic001G515900--Sobic004G071300 Sobic010G077275 Sobic010G077275 Sobic001G515900--Sobic010G077275 Sobic010G174600 Sobic010G174600 Sobic001G515900--Sobic010G174600 Sobic003G418600 Sobic003G418600 Sobic001G515900--Sobic003G418600 Sobic001G146450 Sobic001G146450 Sobic001G515900--Sobic001G146450 Sobic007G084900 Sobic007G084900 Sobic001G515900--Sobic007G084900 Sobic001G352100 Sobic001G352100 Sobic001G515900--Sobic001G352100 Sobic006G176300 Sobic006G176300 Sobic001G515900--Sobic006G176300 Sobic001G371500 Sobic001G371500 Sobic001G515900--Sobic001G371500 Sobic004G071300--Sobic010G077275 Sobic004G071300--Sobic010G174600 Sobic001G251650 Sobic001G251650 Sobic004G071300--Sobic001G251650 Sobic004G071300--Sobic001G515900 Sobic004G071300--Sobic001G146450 Sobic004G071300--Sobic003G418600 Sobic004G071300--Sobic001G352100 Sobic004G071300--Sobic006G176300 Sobic004G071300--Sobic007G084900 Sobic010G077275--Sobic001G146450 Sobic010G077275--Sobic006G176300 Sobic010G077275--Sobic001G352100 Sobic010G077275--Sobic003G418600 Sobic001G018700 Sobic001G018700 Sobic010G077275--Sobic001G018700 Sobic010G174600--Sobic004G071300 Sobic010G174600--Sobic010G077275 Sobic010G174600--Sobic001G515900 Sobic010G174600--Sobic001G146450 Sobic010G174600--Sobic003G418600 Sobic010G174600--Sobic006G176300 Sobic010G174600--Sobic001G352100 Sobic001G110150 Sobic001G110150 Sobic010G174600--Sobic001G110150 Sobic004G099650 Sobic004G099650 Sobic010G174600--Sobic004G099650 Sobic003G418600--Sobic001G146450 Sobic003G418600--Sobic010G077275 Sobic001G183900 Sobic001G183900 Sobic003G418600--Sobic001G183900 Sobic003G418600--Sobic006G176300 Sobic003G072100 Sobic003G072100 Sobic003G418600--Sobic003G072100 Sobic005G207900 Sobic005G207900 Sobic003G418600--Sobic005G207900 Sobic003G418600--Sobic001G018700 Sobic001G146450--Sobic006G176300 Sobic001G146450--Sobic001G018700 Sobic003G137832 Sobic003G137832 Sobic007G084900--Sobic003G137832 Sobic002G258200 Sobic002G258200 Sobic007G084900--Sobic002G258200 Sobic007G084900--Sobic001G146450 Sobic006G080050 Sobic006G080050 Sobic007G084900--Sobic006G080050 Sobic007G084900--Sobic001G018700 Sobic001G352100--Sobic010G077275 Sobic001G352100--Sobic001G146450 Sobic002G099500 Sobic002G099500 Sobic001G352100--Sobic002G099500 Sobic003G178101 Sobic003G178101 Sobic001G352100--Sobic003G178101 Sobic003G384650 Sobic003G384650 Sobic001G352100--Sobic003G384650 Sobic001G211101 Sobic001G211101 Sobic001G352100--Sobic001G211101 Sobic001G352100--Sobic006G176300 Sobic006G075650 Sobic006G075650 Sobic001G352100--Sobic006G075650 Sobic003G021700 Sobic003G021700 Sobic001G352100--Sobic003G021700 Sobic007G221300 Sobic007G221300 Sobic006G176300--Sobic007G221300 Sobic006G176300--Sobic001G018700 Sobic007G054300 Sobic007G054300 Sobic001G371500--Sobic007G054300 Sobic003G089400 Sobic003G089400 Sobic001G371500--Sobic003G089400 Sobic001G371500--Sobic001G018700
Octagon: transcription factors


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