Gene annotation
Transcriptome id Sobic.002G135600.1
Synonym Sb02g012090
Functional annotation Cupin domain containing protein, expressed
UniProt C5X5Z6
Pfam PF07883
Panther DB PTHR31238 PTHR31238:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G02335 : germin-like protein subfamily 2 member 2 precursor
RAP-DB (Rice) LOC_Os09g39530.1 : Cupin domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQJ91594 , KQJ91593 , KQK02320
Barley HORVU5Hr1G080640.1 , HORVU5Hr1G080640.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G193400 - -
2 Sobic.010G127500 hydrolase, alpha/beta fold family domain containing protein, expressed -
3 Sobic.008G091100 - -
4 Sobic.005G083932 - -
5 Sobic.001G317900 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
6 Sobic.001G317900 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
7 Sobic.001G317900 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.001G317900 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.008G174400 OsFBX464 - F-box domain containing protein, expressed -
10 Sobic.002G191200 OsFBX55 - F-box domain containing protein, expressed -
11 Sobic.001G059300 acetyltransferase, GNAT family, putative, expressed -
12 Sobic.002G373500 OsFBX152 - F-box domain containing protein, expressed -
13 Sobic.007G080660 - -
14 Sobic.001G260900 - -
15 Sobic.004G087432 - -
16 Sobic.007G115050 - -
17 Sobic.005G145000 expressed protein -
18 Sobic.006G030250 - -
19 Sobic.005G134301 - -
20 Sobic.002G288800 serine/threonine-protein kinase receptor precursor, putative, expressed -


Gene co-expression network
sample Sobic002G135600 Sobic002G135600 Sobic005G193400 Sobic005G193400 Sobic002G135600--Sobic005G193400 Sobic010G127500 Sobic010G127500 Sobic002G135600--Sobic010G127500 Sobic008G091100 Sobic008G091100 Sobic002G135600--Sobic008G091100 Sobic005G083932 Sobic005G083932 Sobic002G135600--Sobic005G083932 Sobic001G317900 Sobic001G317900 Sobic002G135600--Sobic001G317900 Sobic008G174400 Sobic008G174400 Sobic002G135600--Sobic008G174400 Sobic005G193400--Sobic008G091100 Sobic004G087432 Sobic004G087432 Sobic005G193400--Sobic004G087432 Sobic007G080660 Sobic007G080660 Sobic005G193400--Sobic007G080660 Sobic005G193400--Sobic001G317900 Sobic005G193400--Sobic005G083932 Sobic002G191200 Sobic002G191200 Sobic005G193400--Sobic002G191200 Sobic006G030250 Sobic006G030250 Sobic010G127500--Sobic006G030250 Sobic010G127500--Sobic001G317900 Sobic010G127500--Sobic005G083932 Sobic010G127500--Sobic008G174400 Sobic010G127500--Sobic002G191200 Sobic002G373500 Sobic002G373500 Sobic010G127500--Sobic002G373500 Sobic008G091100--Sobic004G087432 Sobic008G091100--Sobic001G317900 Sobic008G091100--Sobic005G083932 Sobic008G091100--Sobic008G174400 Sobic008G091100--Sobic002G191200 Sobic008G091100--Sobic010G127500 Sobic005G083932--Sobic001G317900 Sobic005G083932--Sobic008G174400 Sobic005G083932--Sobic002G191200 Sobic005G083932--Sobic002G373500 Sobic005G083932--Sobic010G127500 Sobic005G083932--Sobic007G080660 Sobic001G317900--Sobic001G317900 Sobic001G317900--Sobic005G083932 Sobic001G317900--Sobic008G174400 Sobic001G317900--Sobic002G191200 Sobic001G317900--Sobic002G373500 Sobic001G317900--Sobic010G127500 Sobic001G317900--Sobic007G080660 Sobic008G174400--Sobic001G317900 Sobic008G174400--Sobic002G373500 Sobic008G174400--Sobic005G083932 Sobic008G174400--Sobic002G191200 Sobic008G174400--Sobic010G127500 Sobic008G174400--Sobic007G080660
Octagon: transcription factors


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