Gene annotation
Transcriptome id Sobic.002G153900.1
Synonym Sb02g019110, WIP2, NTT
Functional annotation ZOS9-02 - C2H2 zinc finger protein, expressed
UniProt C5X870
Pfam -
Panther DB PTHR10593 PTHR10593:SF41
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G20880 : WIP domain protein 4
RAP-DB (Rice) LOC_Os09g10980.1 : ZOS9-02 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a037244 , Zm00025a046409 , Zm00025a033793 , Zm00025a051571 , Zm00025a043815 , Zm00025a026771 , Zm00025a013702 , Zm00025a047434 , Zm00025a005046 , Zm00025a042128
Brachypodium KQK10684 , KQK17682 , KQJ89685 , KQK06003 , KQJ90731 , KQJ89791
Barley -
Wheat TraesCS5A02G179800 , TraesCS1A02G276800 , TraesCS5B02G177600 , TraesCS7B02G304000 , TraesCS7D02G242600 , TraesCS5D02G179700 , TraesCS3D02G364800 , TraesCS3B02G404000 , TraesCS1D02G276200 , TraesCS5D02G270700 , TraesCS5D02G184400 , TraesCS5A02G175400 , TraesCS3A02G371700 , TraesCS5B02G262400 , TraesCS7D02G397800 , TraesCS1B02G285900 , TraesCS7B02G147400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G126750 - -
2 Sobic.004G358200 RING-H2 finger protein, putative, expressed -
3 Sobic.001G261464 - -
4 Sobic.002G026150 - -
5 Sobic.006G026300 expressed protein -
6 Sobic.006G109600 - -
7 Sobic.005G031901 - -
8 Sobic.004G358301 - -
9 Sobic.002G100100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.010G147300 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
11 Sobic.004G243700 - -
12 Sobic.007G064000 expressed protein -
13 Sobic.008G139250 - -
14 Sobic.002G175700 STE_MEK_ste7_MAP2K.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04368: MAP2K1, mitogen-activated protein kinase kinase 1
15 Sobic.005G048100 - -
16 Sobic.002G397650 - -
17 Sobic.007G067800 - -
18 Sobic.002G384600 expressed protein -
19 Sobic.003G281700 pentatricopeptide, putative, expressed -
20 Sobic.008G079733 - -


Gene co-expression network
sample Sobic002G153900 Sobic002G153900 Sobic003G126750 Sobic003G126750 Sobic002G153900--Sobic003G126750 Sobic004G358200 Sobic004G358200 Sobic002G153900--Sobic004G358200 Sobic001G261464 Sobic001G261464 Sobic002G153900--Sobic001G261464 Sobic002G026150 Sobic002G026150 Sobic002G153900--Sobic002G026150 Sobic006G026300 Sobic006G026300 Sobic002G153900--Sobic006G026300 Sobic006G109600 Sobic006G109600 Sobic002G153900--Sobic006G109600 Sobic005G031901 Sobic005G031901 Sobic002G153900--Sobic005G031901 Sobic004G358301 Sobic004G358301 Sobic002G153900--Sobic004G358301 Sobic002G100100 Sobic002G100100 Sobic002G153900--Sobic002G100100 Sobic003G126750--Sobic006G109600 Sobic003G126750--Sobic005G031901 Sobic003G126750--Sobic002G026150 Sobic003G126750--Sobic001G261464 Sobic010G147300 Sobic010G147300 Sobic003G126750--Sobic010G147300 Sobic003G126750--Sobic002G100100 Sobic003G126750--Sobic004G358301 Sobic004G243700 Sobic004G243700 Sobic003G126750--Sobic004G243700 Sobic003G126750--Sobic002G153900 Sobic004G358200--Sobic001G261464 Sobic004G358200--Sobic003G126750 Sobic004G358200--Sobic002G153900 Sobic004G358200--Sobic005G031901 Sobic004G358200--Sobic006G109600 Sobic004G358200--Sobic006G026300 Sobic004G358200--Sobic002G100100 Sobic004G358200--Sobic004G243700 Sobic004G358200--Sobic002G026150 Sobic001G261464--Sobic005G031901 Sobic001G261464--Sobic003G126750 Sobic001G261464--Sobic006G109600 Sobic001G261464--Sobic002G100100 Sobic001G261464--Sobic010G147300 Sobic001G261464--Sobic004G358200 Sobic001G261464--Sobic004G358301 Sobic001G261464--Sobic004G243700 Sobic001G261464--Sobic002G026150 Sobic002G026150--Sobic003G126750 Sobic002G026150--Sobic006G109600 Sobic002G026150--Sobic005G031901 Sobic002G026150--Sobic001G261464 Sobic002G026150--Sobic010G147300 Sobic002G026150--Sobic004G358301 Sobic002G026150--Sobic002G100100 Sobic002G026150--Sobic002G153900 Sobic002G026150--Sobic004G243700 Sobic006G026300--Sobic002G100100 Sobic006G026300--Sobic001G261464 Sobic006G026300--Sobic002G153900 Sobic006G026300--Sobic004G243700 Sobic006G026300--Sobic005G031901 Sobic006G026300--Sobic004G358200 Sobic006G026300--Sobic003G126750 Sobic006G026300--Sobic006G109600 Sobic006G026300--Sobic010G147300 Sobic006G109600--Sobic003G126750 Sobic006G109600--Sobic005G031901 Sobic006G109600--Sobic010G147300 Sobic006G109600--Sobic001G261464 Sobic006G109600--Sobic002G100100 Sobic006G109600--Sobic002G026150 Sobic002G175700 Sobic002G175700 Sobic006G109600--Sobic002G175700 Sobic006G109600--Sobic004G358301 Sobic006G109600--Sobic004G243700 Sobic005G031901--Sobic010G147300 Sobic005G031901--Sobic006G109600 Sobic005G031901--Sobic003G126750 Sobic005G031901--Sobic001G261464 Sobic005G031901--Sobic004G358301 Sobic005G031901--Sobic002G100100 Sobic005G031901--Sobic002G026150 Sobic005G031901--Sobic002G175700 Sobic007G064000 Sobic007G064000 Sobic005G031901--Sobic007G064000 Sobic004G358301--Sobic005G031901 Sobic004G358301--Sobic010G147300 Sobic004G358301--Sobic003G126750 Sobic004G358301--Sobic006G109600 Sobic004G358301--Sobic001G261464 Sobic004G358301--Sobic002G100100 Sobic004G358301--Sobic002G026150 Sobic004G358301--Sobic002G153900 Sobic004G358301--Sobic004G243700 Sobic002G100100--Sobic005G031901 Sobic002G100100--Sobic001G261464 Sobic002G100100--Sobic006G109600 Sobic002G100100--Sobic003G126750 Sobic002G100100--Sobic010G147300 Sobic002G100100--Sobic006G026300 Sobic002G100100--Sobic004G358301 Sobic002G100100--Sobic004G243700 Sobic002G100100--Sobic002G026150
Octagon: transcription factors


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