Gene annotation
| Transcriptome id | Sobic.002G265133.1 |
|---|---|
| Synonym | - |
| Functional annotation | - |
| UniProt | A0A1W0W5U6 |
| Pfam | PF00076 |
| Panther DB | PTHR10352 PTHR10352:SF1 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0003676; nucleic acid binding GO:0005852eukaryotic translation initiation factor 3 complex GO:0005737cytoplasm GO:0003743translation initiation factor activity |
Orthologs (automatic annotation)
| TAIR | - |
|---|---|
| RAP-DB (Rice) | LOC_Os05g23790.1 : retrotransposon, putative, centromere-specific, expressed |
| MaizeGDB (Corn) | - |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.004G293900 | thioesterase family protein, putative, expressed | - |
| 2 | Sobic.009G069100 | dolichol phosphate-mannose biosynthesis regulatory protein, putative, expressed | K09658: dolichol phosphate-mannose biosynthesis regulatory protein |
| 3 | Sobic.010G152900 | beta-D-xylosidase, putative, expressed | - |
| 4 | Sobic.002G129700 | LTPL62 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed | - |
| 5 | Sobic.001G332050 | - | - |
| 6 | Sobic.001G332050 | - | - |
| 7 | Sobic.001G332050 | - | - |
| 8 | Sobic.001G332050 | - | - |
| 9 | Sobic.001G332050 | - | - |
| 10 | Sobic.001G332050 | - | - |
| 11 | Sobic.001G332050 | - | - |
| 12 | Sobic.001G332050 | - | - |
| 13 | Sobic.001G332050 | - | - |
| 14 | Sobic.001G332050 | - | - |
| 15 | Sobic.001G332050 | - | - |
| 16 | Sobic.001G332050 | - | - |
| 17 | Sobic.001G332050 | - | - |
| 18 | Sobic.001G332050 | - | - |
| 19 | Sobic.001G332050 | - | - |
| 20 | Sobic.001G332050 | - | - |
Gene co-expression network
Octagon: transcription factors
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