Gene annotation
Transcriptome id Sobic.002G345100.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QF30
Pfam PF00069 PF00139
Panther DB PTHR27007 PTHR27007:SF52
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G10530 : Concanavalin A-like lectin protein kinase family protein
RAP-DB (Rice) LOC_Os01g57100.1 : expressed protein
MaizeGDB (Corn) Zm00025a014947
Brachypodium KQK15650
Barley HORVU2Hr1G038790.1 , HORVU7Hr1G098030.1
Wheat TraesCS4D02G102700 , TraesCS4A02G201800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G046400 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed K18054: 2'-deoxymugineic-acid 2'-dioxygenase / mugineic-acid 3-dioxygenase
2 Sobic.008G045900 - -
3 Sobic.009G142600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cysteine-rich receptor-like protein kinase 6 precursor, putative, expressed -
4 Sobic.003G210701 - -
5 Sobic.005G025500 expressed protein -
6 Sobic.002G084100 - -
7 Sobic.005G014600 OsMan09 - Endo-Beta-Mannanase, expressed K19355: mannan endo-1,4-beta-mannosidase
8 Sobic.001G358101 - -
9 Sobic.004G162800 - -
10 Sobic.001G234700 AP2 domain containing protein, expressed -
11 Sobic.001G234700 AP2 domain containing protein, expressed -
12 Sobic.001G234700 AP2 domain containing protein, expressed -
13 Sobic.001G234700 AP2 domain containing protein, expressed -
14 Sobic.001G234700 AP2 domain containing protein, expressed -
15 Sobic.001G234700 AP2 domain containing protein, expressed -
16 Sobic.001G234700 AP2 domain containing protein, expressed -
17 Sobic.001G234700 AP2 domain containing protein, expressed -
18 Sobic.001G234700 AP2 domain containing protein, expressed -
19 Sobic.001G234700 AP2 domain containing protein, expressed -
20 Sobic.001G234700 AP2 domain containing protein, expressed -


Gene co-expression network
sample Sobic002G345100 Sobic002G345100 Sobic002G046400 Sobic002G046400 Sobic002G345100--Sobic002G046400 Sobic008G045900 Sobic008G045900 Sobic002G345100--Sobic008G045900 Sobic009G142600 Sobic009G142600 Sobic002G345100--Sobic009G142600 Sobic003G210701 Sobic003G210701 Sobic002G345100--Sobic003G210701 Sobic005G025500 Sobic005G025500 Sobic002G345100--Sobic005G025500 Sobic002G084100 Sobic002G084100 Sobic002G345100--Sobic002G084100 Sobic005G014600 Sobic005G014600 Sobic002G345100--Sobic005G014600 Sobic001G358101 Sobic001G358101 Sobic002G345100--Sobic001G358101 Sobic004G162800 Sobic004G162800 Sobic002G345100--Sobic004G162800 Sobic002G046400--Sobic005G025500 Sobic008G045100 Sobic008G045100 Sobic002G046400--Sobic008G045100 Sobic002G046400--Sobic004G162800 Sobic002G046400--Sobic001G358101 Sobic001G234700 Sobic001G234700 Sobic002G046400--Sobic001G234700 Sobic001G138500 Sobic001G138500 Sobic008G045900--Sobic001G138500 Sobic001G045300 Sobic001G045300 Sobic008G045900--Sobic001G045300 Sobic004G090900 Sobic004G090900 Sobic008G045900--Sobic004G090900 Sobic007G027400 Sobic007G027400 Sobic008G045900--Sobic007G027400 Sobic002G046500 Sobic002G046500 Sobic008G045900--Sobic002G046500 Sobic008G008701 Sobic008G008701 Sobic008G045900--Sobic008G008701 Sobic008G045900--Sobic002G084100 Sobic001G033701 Sobic001G033701 Sobic008G045900--Sobic001G033701 Sobic008G045900--Sobic009G142600 Sobic009G142600--Sobic008G045900 Sobic008G053700 Sobic008G053700 Sobic009G142600--Sobic008G053700 Sobic006G258200 Sobic006G258200 Sobic009G142600--Sobic006G258200 Sobic001G160300 Sobic001G160300 Sobic009G142600--Sobic001G160300 Sobic008G069901 Sobic008G069901 Sobic009G142600--Sobic008G069901 Sobic003G046000 Sobic003G046000 Sobic009G142600--Sobic003G046000 Sobic009G113300 Sobic009G113300 Sobic009G142600--Sobic009G113300 Sobic010G081500 Sobic010G081500 Sobic009G142600--Sobic010G081500 Sobic004G184900 Sobic004G184900 Sobic009G142600--Sobic004G184900 Sobic003G210701--Sobic001G234700 Sobic008G008601 Sobic008G008601 Sobic005G025500--Sobic008G008601 Sobic005G025500--Sobic005G014600 Sobic004G122700 Sobic004G122700 Sobic005G025500--Sobic004G122700 Sobic005G025500--Sobic004G090900 Sobic005G025500--Sobic008G069901 Sobic005G025500--Sobic008G008701 Sobic002G063500 Sobic002G063500 Sobic005G025500--Sobic002G063500 Sobic001G452300 Sobic001G452300 Sobic005G025500--Sobic001G452300 Sobic005G025500--Sobic002G046500 Sobic003G245101 Sobic003G245101 Sobic002G084100--Sobic003G245101 Sobic002G289601 Sobic002G289601 Sobic002G084100--Sobic002G289601 Sobic009G159800 Sobic009G159800 Sobic002G084100--Sobic009G159800 Sobic002G084100--Sobic004G162800 Sobic002G084100--Sobic010G081500 Sobic002G084100--Sobic002G046500 Sobic002G084100--Sobic009G113300 Sobic002G084100--Sobic001G358101 Sobic002G084100--Sobic005G014600 Sobic005G014600--Sobic002G289601 Sobic005G014600--Sobic009G113300 Sobic005G014600--Sobic002G084100 Sobic005G014600--Sobic010G081500 Sobic005G014600--Sobic002G046500 Sobic005G014600--Sobic003G245101 Sobic005G014600--Sobic004G090900 Sobic005G014600--Sobic009G159800 Sobic005G014600--Sobic008G069901 Sobic001G358101--Sobic004G162800 Sobic003G190701 Sobic003G190701 Sobic001G358101--Sobic003G190701 Sobic001G358101--Sobic003G245101 Sobic001G358101--Sobic001G234700 Sobic004G162800--Sobic003G245101 Sobic004G162800--Sobic001G358101 Sobic004G162800--Sobic003G190701 Sobic004G162800--Sobic002G084100 Sobic004G162800--Sobic009G159800 Sobic004G162800--Sobic001G234700
Octagon: transcription factors


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