Gene annotation
Transcriptome id Sobic.002G349900.1
Synonym MAR1, Sb02g037210, TOC75-III
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
outer membrane protein, OMP85 family, putative, expressed
UniProt A0A1B6QF42
Pfam PF01103
Panther DB PTHR12815 PTHR12815:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G46740 : translocon at the outer envelope membrane of chloroplasts 75-III
RAP-DB (Rice) LOC_Os03g16440.1 : outer membrane protein, OMP85 family, putative, expressed
MaizeGDB (Corn) Zm00025a052771
Brachypodium KQK22363
Barley HORVU4Hr1G060190.1 , HORVU4Hr1G060190.2 , HORVU4Hr1G060190.3 , HORVU4Hr1G060190.6 , HORVU4Hr1G060190.4 , HORVU4Hr1G060190.5
Wheat TraesCS4B02G209200 , TraesCS4D02G209900 , TraesCS4A02G095300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G090400 seven in absentia protein family protein, expressed -
2 Sobic.003G356850 - -
3 Sobic.002G280950 - -
4 Sobic.008G071700 - -
5 Sobic.005G006900 RNA recognition motif containing protein, putative, expressed -
6 Sobic.004G254700 plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.002G019300 OsFBL33 - F-box domain and LRR containing protein, expressed -
8 Sobic.009G149100 GASR6 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
9 Sobic.004G335400 expressed protein -
10 Sobic.006G276600 auxin-induced protein 5NG4, putative, expressed -
11 Sobic.002G123400 OsRR7 type-A response regulator, expressed K14492: two-component response regulator ARR-A family
12 Sobic.005G041500 OsProCP5 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed K01285: lysosomal Pro-X carboxypeptidase
13 Sobic.002G298600 LTPL63 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
14 Sobic.003G090200 seven in absentia protein family domain containing protein, expressed -
15 Sobic.002G100300 OsFBD15 - F-box and FBD domain containing protein, expressed -
16 Sobic.005G212300 MBTB24 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
17 Sobic.003G354850 - -
18 Sobic.004G002700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
19 Sobic.004G349450 - -
20 Sobic.008G155000 ankyrin, putative, expressed -


Gene co-expression network
sample Sobic002G349900 Sobic002G349900 Sobic003G090400 Sobic003G090400 Sobic002G349900--Sobic003G090400 Sobic003G356850 Sobic003G356850 Sobic002G349900--Sobic003G356850 Sobic002G280950 Sobic002G280950 Sobic002G349900--Sobic002G280950 Sobic008G071700 Sobic008G071700 Sobic002G349900--Sobic008G071700 Sobic005G006900 Sobic005G006900 Sobic002G349900--Sobic005G006900 Sobic004G254700 Sobic004G254700 Sobic002G349900--Sobic004G254700 Sobic002G019300 Sobic002G019300 Sobic002G349900--Sobic002G019300 Sobic009G149100 Sobic009G149100 Sobic002G349900--Sobic009G149100 Sobic004G335400 Sobic004G335400 Sobic002G349900--Sobic004G335400 Sobic009G240500 Sobic009G240500 Sobic003G090400--Sobic009G240500 Sobic003G090400--Sobic005G006900 Sobic003G090200 Sobic003G090200 Sobic003G090400--Sobic003G090200 Sobic002G100300 Sobic002G100300 Sobic003G090400--Sobic002G100300 Sobic005G212300 Sobic005G212300 Sobic003G090400--Sobic005G212300 Sobic003G354850 Sobic003G354850 Sobic003G090400--Sobic003G354850 Sobic005G201400 Sobic005G201400 Sobic003G090400--Sobic005G201400 Sobic002G123400 Sobic002G123400 Sobic003G090400--Sobic002G123400 Sobic006G018000 Sobic006G018000 Sobic003G090400--Sobic006G018000 Sobic003G356850--Sobic004G254700 Sobic003G356850--Sobic008G071700 Sobic003G356850--Sobic009G149100 Sobic003G356850--Sobic002G019300 Sobic002G013550 Sobic002G013550 Sobic003G356850--Sobic002G013550 Sobic006G276600 Sobic006G276600 Sobic003G356850--Sobic006G276600 Sobic002G298600 Sobic002G298600 Sobic003G356850--Sobic002G298600 Sobic003G356850--Sobic004G335400 Sobic005G041500 Sobic005G041500 Sobic003G356850--Sobic005G041500 Sobic003G064100 Sobic003G064100 Sobic002G280950--Sobic003G064100 Sobic003G211233 Sobic003G211233 Sobic002G280950--Sobic003G211233 Sobic002G000800 Sobic002G000800 Sobic002G280950--Sobic002G000800 Sobic002G193200 Sobic002G193200 Sobic002G280950--Sobic002G193200 Sobic005G198800 Sobic005G198800 Sobic002G280950--Sobic005G198800 Sobic008G008000 Sobic008G008000 Sobic002G280950--Sobic008G008000 Sobic005G077001 Sobic005G077001 Sobic002G280950--Sobic005G077001 Sobic003G079532 Sobic003G079532 Sobic002G280950--Sobic003G079532 Sobic005G058600 Sobic005G058600 Sobic002G280950--Sobic005G058600 Sobic008G071700--Sobic004G254700 Sobic008G071700--Sobic005G006900 Sobic008G071700--Sobic002G019300 Sobic008G071700--Sobic006G276600 Sobic008G071700--Sobic009G149100 Sobic008G071700--Sobic004G335400 Sobic008G071700--Sobic002G298600 Sobic008G071700--Sobic005G041500 Sobic008G071700--Sobic003G090200 Sobic005G006900--Sobic008G071700 Sobic005G006900--Sobic004G254700 Sobic005G006900--Sobic006G276600 Sobic005G006900--Sobic002G019300 Sobic005G006900--Sobic009G149100 Sobic005G006900--Sobic003G090200 Sobic005G006900--Sobic002G100300 Sobic005G006900--Sobic005G212300 Sobic005G006900--Sobic003G354850 Sobic004G254700--Sobic002G019300 Sobic004G254700--Sobic006G276600 Sobic004G254700--Sobic009G149100 Sobic004G254700--Sobic004G335400 Sobic004G254700--Sobic005G041500 Sobic004G254700--Sobic002G298600 Sobic004G254700--Sobic008G071700 Sobic004G254700--Sobic005G006900 Sobic001G241700 Sobic001G241700 Sobic004G254700--Sobic001G241700 Sobic002G019300--Sobic004G335400 Sobic002G019300--Sobic006G276600 Sobic002G019300--Sobic005G041500 Sobic002G019300--Sobic009G149100 Sobic002G019300--Sobic004G254700 Sobic002G019300--Sobic002G298600 Sobic002G019300--Sobic008G071700 Sobic002G019300--Sobic001G241700 Sobic001G021200 Sobic001G021200 Sobic002G019300--Sobic001G021200 Sobic009G149100--Sobic006G276600 Sobic009G149100--Sobic002G019300 Sobic009G149100--Sobic004G335400 Sobic009G149100--Sobic005G041500 Sobic009G149100--Sobic004G254700 Sobic009G149100--Sobic002G298600 Sobic009G149100--Sobic001G241700 Sobic009G149100--Sobic008G071700 Sobic001G103600 Sobic001G103600 Sobic009G149100--Sobic001G103600 Sobic004G335400--Sobic002G019300 Sobic004G335400--Sobic005G041500 Sobic004G335400--Sobic006G276600 Sobic004G335400--Sobic002G298600 Sobic004G335400--Sobic009G149100 Sobic004G335400--Sobic004G254700 Sobic004G335400--Sobic001G241700 Sobic004G335400--Sobic001G021200 Sobic010G202400 Sobic010G202400 Sobic004G335400--Sobic010G202400
Octagon: transcription factors


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