Gene annotation
Transcriptome id Sobic.002G364301.1
Synonym -
Functional annotation -
UniProt A0A1W0W7A2
Pfam PF01015
Panther DB PTHR11830
NCBI CDD KOG1628; 40S ribosomal protein S3A
KEGG Orthology -
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0005622intracellular GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT4G34670 : Ribosomal protein S3Ae
RAP-DB (Rice) LOC_Os03g10340.1 : 40S ribosomal protein S3a, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G177700 zinc knuckle domain containing protein, expressed -
2 Sobic.005G226700 zinc finger, C3HC4 type domain containing protein, expressed -
3 Sobic.001G220066 - -
4 Sobic.002G157350 - -
5 Sobic.002G348200 expressed protein -
6 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
7 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
8 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
9 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
10 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
11 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
12 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
13 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
14 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
15 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
16 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
17 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
18 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
19 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
20 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic002G364301 Sobic002G364301 Sobic001G177700 Sobic001G177700 Sobic002G364301--Sobic001G177700 Sobic005G226700 Sobic005G226700 Sobic002G364301--Sobic005G226700 Sobic001G220066 Sobic001G220066 Sobic002G364301--Sobic001G220066 Sobic002G157350 Sobic002G157350 Sobic002G364301--Sobic002G157350 Sobic002G348200 Sobic002G348200 Sobic002G364301--Sobic002G348200 Sobic001G272300 Sobic001G272300 Sobic002G364301--Sobic001G272300 Sobic007G129500 Sobic007G129500 Sobic001G177700--Sobic007G129500 Sobic001G177700--Sobic002G364301 Sobic002G088500 Sobic002G088500 Sobic001G177700--Sobic002G088500 Sobic001G177700--Sobic005G226700 Sobic001G055300 Sobic001G055300 Sobic001G177700--Sobic001G055300 Sobic006G107332 Sobic006G107332 Sobic001G177700--Sobic006G107332 Sobic009G214700 Sobic009G214700 Sobic001G177700--Sobic009G214700 Sobic007G141001 Sobic007G141001 Sobic001G177700--Sobic007G141001 Sobic003G353050 Sobic003G353050 Sobic001G177700--Sobic003G353050 Sobic005G226700--Sobic001G055300 Sobic005G226700--Sobic001G177700 Sobic005G226700--Sobic002G364301 Sobic005G226700--Sobic006G107332 Sobic005G226700--Sobic007G129500 Sobic007G059800 Sobic007G059800 Sobic005G226700--Sobic007G059800 Sobic002G069601 Sobic002G069601 Sobic005G226700--Sobic002G069601 Sobic003G318400 Sobic003G318400 Sobic005G226700--Sobic003G318400 Sobic005G181700 Sobic005G181700 Sobic005G226700--Sobic005G181700 Sobic001G220066--Sobic002G157350 Sobic001G220066--Sobic001G272300 Sobic002G157350--Sobic001G220066 Sobic002G157350--Sobic001G272300 Sobic002G348200--Sobic001G220066 Sobic002G348200--Sobic002G157350 Sobic002G348200--Sobic001G272300 Sobic001G272300--Sobic001G272300
Octagon: transcription factors


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