Gene annotation
Transcriptome id Sobic.003G001701.1
Synonym -
Functional annotation -
UniProt C5XJH6
Pfam PF02365
Panther DB PTHR31719 PTHR31719:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT1G61110 : NAC domain containing protein 25
RAP-DB (Rice) LOC_Os03g21060.1 : No apical meristem protein, putative, expressed
MaizeGDB (Corn) Zm00025a002287 , Zm00025a049186 , Zm00025a035397 , Zm00025a025343 , Zm00025a054134
Brachypodium KQK03520 , KQK14591 , KQJ87582 , KQJ85858
Barley HORVU2Hr1G017470.1 , HORVU2Hr1G017470.3 , HORVU2Hr1G017470.2 , HORVU2Hr1G017470.4 , HORVU2Hr1G017470.7 , HORVU2Hr1G017470.9 , HORVU2Hr1G017470.8 , HORVU3Hr1G032680.1 , HORVU2Hr1G017470.15 , HORVU2Hr1G017470.14 , HORVU2Hr1G017470.16 , HORVU2Hr1G017470.11 , HORVU2Hr1G017470.10 , HORVU2Hr1G017470.13 , HORVU2Hr1G017470.12
Wheat TraesCS2B02G119000 , TraesCS3B02G194000 , TraesCS2D02G101300 , TraesCS2B02G119100 , TraesCS3D02G078900 , TraesCS2D02G101400 , TraesCS3A02G162900 , TraesCS3D02G170000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G110151 - -
2 Sobic.007G191150 - -
3 Sobic.010G272700 exo70 exocyst complex subunit family protein, putative, expressed -
4 Sobic.005G032700 phospholipase, putative, expressed K16818: phospholipase A1
5 Sobic.002G247700 expressed protein -
6 Sobic.001G209000 secretory protein, putative, expressed -
7 Sobic.001G355850 - -
8 Sobic.003G254400 expressed protein -
9 Sobic.007G121800 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
10 Sobic.003G318600 - -
11 Sobic.003G008400 acetyltransferase, GNAT family protein, expressed -
12 Sobic.003G244401 - -
13 Sobic.009G025950 - -
14 Sobic.005G080075 - -
15 Sobic.010G043350 - -
16 Sobic.001G100650 - -
17 Sobic.010G064050 - -
18 Sobic.002G082350 - -
19 Sobic.003G360500 glycosyl transferase, putative, expressed K00750: GYG1, glycogenin
20 Sobic.003G034800 MYB family transcription factor, putative, expressed -


Gene co-expression network
sample Sobic003G001701 Sobic003G001701 Sobic008G110151 Sobic008G110151 Sobic003G001701--Sobic008G110151 Sobic007G191150 Sobic007G191150 Sobic003G001701--Sobic007G191150 Sobic010G272700 Sobic010G272700 Sobic003G001701--Sobic010G272700 Sobic005G032700 Sobic005G032700 Sobic003G001701--Sobic005G032700 Sobic002G247700 Sobic002G247700 Sobic003G001701--Sobic002G247700 Sobic001G209000 Sobic001G209000 Sobic003G001701--Sobic001G209000 Sobic001G355850 Sobic001G355850 Sobic003G001701--Sobic001G355850 Sobic003G254400 Sobic003G254400 Sobic003G001701--Sobic003G254400 Sobic007G121800 Sobic007G121800 Sobic003G001701--Sobic007G121800 Sobic008G110151--Sobic007G191150 Sobic010G263151 Sobic010G263151 Sobic008G110151--Sobic010G263151 Sobic003G267400 Sobic003G267400 Sobic008G110151--Sobic003G267400 Sobic003G188700 Sobic003G188700 Sobic008G110151--Sobic003G188700 Sobic008G110151--Sobic003G254400 Sobic008G110151--Sobic001G209000 Sobic003G008400 Sobic003G008400 Sobic008G110151--Sobic003G008400 Sobic008G110151--Sobic001G355850 Sobic003G360500 Sobic003G360500 Sobic008G110151--Sobic003G360500 Sobic007G191150--Sobic010G263151 Sobic007G191150--Sobic003G267400 Sobic007G191150--Sobic008G110151 Sobic003G244401 Sobic003G244401 Sobic007G191150--Sobic003G244401 Sobic007G191150--Sobic001G209000 Sobic006G089601 Sobic006G089601 Sobic007G191150--Sobic006G089601 Sobic006G196800 Sobic006G196800 Sobic007G191150--Sobic006G196800 Sobic007G191150--Sobic007G121800 Sobic003G419100 Sobic003G419100 Sobic007G191150--Sobic003G419100 Sobic010G165925 Sobic010G165925 Sobic010G272700--Sobic010G165925 Sobic010G272700--Sobic010G263151 Sobic010G272700--Sobic003G267400 Sobic010G272700--Sobic006G196800 Sobic007G003250 Sobic007G003250 Sobic010G272700--Sobic007G003250 Sobic001G369701 Sobic001G369701 Sobic010G272700--Sobic001G369701 Sobic003G025500 Sobic003G025500 Sobic010G272700--Sobic003G025500 Sobic010G272700--Sobic003G188700 Sobic006G007700 Sobic006G007700 Sobic010G272700--Sobic006G007700 Sobic001G101650 Sobic001G101650 Sobic005G032700--Sobic001G101650 Sobic005G032700--Sobic002G247700 Sobic002G313850 Sobic002G313850 Sobic005G032700--Sobic002G313850 Sobic005G057500 Sobic005G057500 Sobic005G032700--Sobic005G057500 Sobic008G191800 Sobic008G191800 Sobic005G032700--Sobic008G191800 Sobic002G082350 Sobic002G082350 Sobic005G032700--Sobic002G082350 Sobic010G064050 Sobic010G064050 Sobic005G032700--Sobic010G064050 Sobic001G100650 Sobic001G100650 Sobic005G032700--Sobic001G100650 Sobic005G080075 Sobic005G080075 Sobic005G032700--Sobic005G080075 Sobic002G247700--Sobic005G057500 Sobic002G247700--Sobic005G032700 Sobic002G247700--Sobic008G191800 Sobic002G247700--Sobic005G080075 Sobic002G247700--Sobic001G100650 Sobic002G247700--Sobic010G064050 Sobic002G247700--Sobic002G313850 Sobic002G247700--Sobic003G008400 Sobic002G247700--Sobic002G082350 Sobic001G209000--Sobic010G263151 Sobic001G209000--Sobic003G267400 Sobic001G209000--Sobic001G355850 Sobic001G209000--Sobic006G196800 Sobic001G209000--Sobic003G419100 Sobic001G209000--Sobic003G188700 Sobic001G209000--Sobic003G008400 Sobic001G209000--Sobic003G254400 Sobic003G318600 Sobic003G318600 Sobic001G209000--Sobic003G318600 Sobic001G355850--Sobic010G263151 Sobic001G355850--Sobic001G209000 Sobic001G355850--Sobic006G196800 Sobic001G355850--Sobic003G254400 Sobic001G355850--Sobic003G008400 Sobic001G355850--Sobic003G267400 Sobic001G355850--Sobic003G318600 Sobic001G355850--Sobic003G419100 Sobic008G060400 Sobic008G060400 Sobic001G355850--Sobic008G060400 Sobic003G254400--Sobic003G008400 Sobic003G254400--Sobic005G080075 Sobic003G254400--Sobic001G100650 Sobic003G254400--Sobic010G064050 Sobic003G254400--Sobic003G318600 Sobic003G254400--Sobic002G082350 Sobic003G254400--Sobic003G360500 Sobic009G073200 Sobic009G073200 Sobic003G254400--Sobic009G073200 Sobic001G413400 Sobic001G413400 Sobic003G254400--Sobic001G413400 Sobic007G121800--Sobic005G080075 Sobic007G121800--Sobic003G254400 Sobic007G121800--Sobic001G100650 Sobic007G121800--Sobic010G064050 Sobic007G121800--Sobic003G008400 Sobic007G121800--Sobic002G082350 Sobic007G121800--Sobic009G073200 Sobic007G121800--Sobic003G318600 Sobic007G121800--Sobic008G191800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.