Gene annotation
Transcriptome id Sobic.003G155700.1
Synonym TAF13, Sb03g013580
Functional annotation transcription initiation factor IID, 18kD subunit family protein, expressed
UniProt C5XJT2
Pfam PF02269
Panther DB PTHR11380 PTHR11380:SF5
NCBI CDD KOG3901; Transcription initiation factor IID subunit
KEGG Orthology K03127; transcription initiation factor TFIID subunit 13
Gene Ontology GO:0006366; transcription by RNA polymerase II


Orthologs (automatic annotation)
TAIR AT1G02680 : TBP-associated factor 13
RAP-DB (Rice) LOC_Os01g23630.1 : transcription initiation factor IID, 18kD subunit family protein, expressed
MaizeGDB (Corn) Zm00025a024458
Brachypodium -
Barley -
Wheat TraesCS1D02G111100 , TraesCS1B02G130100 , TraesCS1A02G107900 , TraesCS1A02G107900 , TraesCS5A02G149100 , TraesCS5D02G143700
Populus -


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cDNA sequences
Sobic.003G155700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G143666 - -
2 Sobic.002G014100 OsFBX212 - F-box domain containing protein, expressed -
3 Sobic.003G281000 - -
4 Sobic.002G202050 - -
5 Sobic.002G202050 - -
6 Sobic.002G202050 - -
7 Sobic.002G202050 - -
8 Sobic.006G247200 AMP-binding enzyme, putative, expressed -
9 Sobic.002G344800 - -
10 Sobic.008G004500 MRH1, putative, expressed -
11 Sobic.002G069300 DNA binding protein, putative, expressed -
12 Sobic.005G133750 - -
13 Sobic.002G382200 - -
14 Sobic.004G296750 - -
15 Sobic.004G178550 - -
16 Sobic.001G480900 glyoxalase family protein, putative, expressed -
17 Sobic.002G055000 bZIP transcription factor domain containing protein, expressed -
18 Sobic.006G142925 - -
19 Sobic.008G102466 - -
20 Sobic.009G019400 - -


Gene co-expression network
sample Sobic003G155700 Sobic003G155700 Sobic010G143666 Sobic010G143666 Sobic003G155700--Sobic010G143666 Sobic002G014100 Sobic002G014100 Sobic003G155700--Sobic002G014100 Sobic003G281000 Sobic003G281000 Sobic003G155700--Sobic003G281000 Sobic002G202050 Sobic002G202050 Sobic003G155700--Sobic002G202050 Sobic006G247200 Sobic006G247200 Sobic003G155700--Sobic006G247200 Sobic002G344800 Sobic002G344800 Sobic003G155700--Sobic002G344800 Sobic010G143666--Sobic002G202050 Sobic010G143666--Sobic002G014100 Sobic010G143666--Sobic006G247200 Sobic002G069300 Sobic002G069300 Sobic010G143666--Sobic002G069300 Sobic010G143666--Sobic003G281000 Sobic010G143666--Sobic002G344800 Sobic002G014100--Sobic002G202050 Sobic002G014100--Sobic010G143666 Sobic002G014100--Sobic006G247200 Sobic002G382200 Sobic002G382200 Sobic002G014100--Sobic002G382200 Sobic002G014100--Sobic002G344800 Sobic002G014100--Sobic003G281000 Sobic004G296750 Sobic004G296750 Sobic003G281000--Sobic004G296750 Sobic003G281000--Sobic010G143666 Sobic001G480900 Sobic001G480900 Sobic003G281000--Sobic001G480900 Sobic003G281000--Sobic002G014100 Sobic003G281000--Sobic002G202050 Sobic003G281000--Sobic006G247200 Sobic002G202050--Sobic002G202050 Sobic002G202050--Sobic006G247200 Sobic002G202050--Sobic002G344800 Sobic002G202050--Sobic002G014100 Sobic002G202050--Sobic010G143666 Sobic002G202050--Sobic002G382200 Sobic005G133750 Sobic005G133750 Sobic002G202050--Sobic005G133750 Sobic006G247200--Sobic002G202050 Sobic006G247200--Sobic002G344800 Sobic006G247200--Sobic010G143666 Sobic006G247200--Sobic002G014100 Sobic006G247200--Sobic002G382200 Sobic006G247200--Sobic005G133750 Sobic002G344800--Sobic002G202050 Sobic002G344800--Sobic006G247200 Sobic002G344800--Sobic002G014100 Sobic002G344800--Sobic010G143666 Sobic002G344800--Sobic002G382200 Sobic004G178550 Sobic004G178550 Sobic002G344800--Sobic004G178550
Octagon: transcription factors


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